Skip to main content
crop-pal logo
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, vacuole

Predictor Summary:
  • cytosol 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84344 Canola plasma membrane 90.42 92.52
CDY30731 Canola plasma membrane 89.77 92.32
CDY00315 Canola plasma membrane 91.56 92.16
Bra029248.1-P Field mustard plasma membrane 91.56 92.16
Bra010111.1-P Field mustard plasma membrane 91.4 91.99
CDY45756 Canola plasma membrane 84.9 91.59
CDY45754 Canola plasma membrane 89.45 91.53
CDY16763 Canola peroxisome 80.19 86.06
CDX87266 Canola peroxisome 80.03 86.04
Bra035886.1-P Field mustard plasma membrane 69.16 85.71
Bra035885.1-P Field mustard peroxisome 78.41 85.64
AT3G47960.1 Thale cress plasma membrane 79.87 77.36
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 68.34 70.99
AT1G18880.1 Thale cress cytosol, peroxisome, plasma membrane 61.36 64.4
KRH03408 Soybean cytosol, peroxisome, plasma membrane 58.28 60.64
KRH56970 Soybean cytosol, peroxisome, plasma membrane 57.95 59.8
Solyc03g113420.2.1 Tomato plasma membrane 56.33 59.11
PGSC0003DMT400065196 Potato plasma membrane 56.49 58.88
KRH56969 Soybean plasma membrane 56.49 56.96
KRH03409 Soybean plasma membrane 56.01 56.37
KRH56968 Soybean plasma membrane 54.22 56.04
KRH03412 Soybean plasma membrane 53.25 55.97
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 48.21 53.04
GSMUA_Achr4P22320_001 Banana plasma membrane 41.88 50.99
Os12t0638300-01 Rice extracellular, plasma membrane 48.54 50.94
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 48.7 50.42
Zm00001d013529_P002 Maize plasma membrane 48.21 50.25
TraesCS4D01G026800.1 Wheat golgi, unclear 48.54 50.17
TraesCS4A01G283900.1 Wheat golgi, unclear 48.38 49.92
Os03t0687000-02 Rice plasma membrane 47.56 49.91
EER91066 Sorghum cytosol, peroxisome, plasma membrane 47.89 49.75
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 47.56 49.75
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 48.21 49.42
TraesCS2A01G045500.1 Wheat plasma membrane 48.05 49.42
Zm00001d031213_P001 Maize plasma membrane 40.75 49.31
TraesCS2D01G044200.1 Wheat plasma membrane 47.89 49.25
TraesCS2B01G057700.1 Wheat plasma membrane 47.89 49.25
GSMUA_Achr5P15030_001 Banana cytosol 37.5 48.73
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 48.05 48.37
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 47.89 48.28
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 47.4 48.11
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 47.08 48.01
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 45.29 47.45
TraesCS2D01G044000.1 Wheat plasma membrane 45.94 47.01
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 46.75 46.75
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 46.59 46.74
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 45.78 46.61
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 45.62 45.77
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 43.99 45.62
EES16414 Sorghum cytosol, peroxisome, plasma membrane 44.16 45.56
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 45.29 45.15
AT1G69870.1 Thale cress cytosol, nucleus, plasma membrane 44.81 44.52
EER98133 Sorghum plasma membrane 46.75 44.24
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 46.43 41.69
AT1G27080.1 Thale cress cytosol, golgi, plasma membrane 38.64 41.32
AT1G69860.1 Thale cress plasma membrane 34.09 37.84
AT5G28470.2 Thale cress plasma membrane 33.93 37.25
AT1G68570.1 Thale cress cytosol, peroxisome, plasma membrane 33.93 35.07
AT3G45650.2 Thale cress plasma membrane 31.49 33.22
AT3G16180.1 Thale cress plasma membrane 31.82 33.16
AT3G45660.2 Thale cress plasma membrane 30.03 32.01
AT1G52190.1 Thale cress cytosol, peroxisome, plasma membrane 31.01 31.47
AT3G45720.1 Thale cress plasma membrane 27.6 30.63
AT3G45700.1 Thale cress plasma membrane 27.11 30.47
AT3G45680.1 Thale cress plasma membrane 27.6 30.47
AT5G11570.1 Thale cress plasma membrane 23.54 30.15
AT3G45690.1 Thale cress plasma membrane 24.68 29.46
AT3G45710.1 Thale cress plasma membrane 26.46 29.11
Protein Annotations
MapMan:24.2.2.9EntrezGene:836389UniProt:A0A178UEQ7ProteinID:AED97642.1EMBL:AK316918ArrayExpress:AT5G62680
EnsemblPlantsGene:AT5G62680RefSeq:AT5G62680TAIR:AT5G62680RefSeq:AT5G62680-TAIR-GEnsemblPlants:AT5G62680.1TAIR:AT5G62680.1
Unigene:At.68527ProteinID:BAA97215.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0009506GO:GO:0009628GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085GO:GO:0080167GO:GO:0090448GO:GO:0090449
GO:GO:1901349InterPro:IPR020846InterPro:MFS_domInterPro:MFS_trans_sfRefSeq:NP_201074.1ProteinID:OAO92288.1
PFAM:PF00854PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009001PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59UniProt:Q9LV10
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0000048CCBSEG:seg::
Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
Coordinates
chr5:-:25165137..25168060
Molecular Weight (calculated)
67894.8 Da
IEP (calculated)
9.267
GRAVY (calculated)
0.284
Length
616 amino acids
Sequence
(BLAST)
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.