Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, vacuole
Predictor Summary:
Predictor Summary:
- cytosol 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX84344 | Canola | plasma membrane | 90.42 | 92.52 |
CDY30731 | Canola | plasma membrane | 89.77 | 92.32 |
CDY00315 | Canola | plasma membrane | 91.56 | 92.16 |
Bra029248.1-P | Field mustard | plasma membrane | 91.56 | 92.16 |
Bra010111.1-P | Field mustard | plasma membrane | 91.4 | 91.99 |
CDY45756 | Canola | plasma membrane | 84.9 | 91.59 |
CDY45754 | Canola | plasma membrane | 89.45 | 91.53 |
CDY16763 | Canola | peroxisome | 80.19 | 86.06 |
CDX87266 | Canola | peroxisome | 80.03 | 86.04 |
Bra035886.1-P | Field mustard | plasma membrane | 69.16 | 85.71 |
Bra035885.1-P | Field mustard | peroxisome | 78.41 | 85.64 |
AT3G47960.1 | Thale cress | plasma membrane | 79.87 | 77.36 |
CDY16764 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 68.34 | 70.99 |
AT1G18880.1 | Thale cress | cytosol, peroxisome, plasma membrane | 61.36 | 64.4 |
KRH03408 | Soybean | cytosol, peroxisome, plasma membrane | 58.28 | 60.64 |
KRH56970 | Soybean | cytosol, peroxisome, plasma membrane | 57.95 | 59.8 |
Solyc03g113420.2.1 | Tomato | plasma membrane | 56.33 | 59.11 |
PGSC0003DMT400065196 | Potato | plasma membrane | 56.49 | 58.88 |
KRH56969 | Soybean | plasma membrane | 56.49 | 56.96 |
KRH03409 | Soybean | plasma membrane | 56.01 | 56.37 |
KRH56968 | Soybean | plasma membrane | 54.22 | 56.04 |
KRH03412 | Soybean | plasma membrane | 53.25 | 55.97 |
GSMUA_Achr5P15010_001 | Banana | cytosol, peroxisome, plasma membrane | 48.21 | 53.04 |
GSMUA_Achr4P22320_001 | Banana | plasma membrane | 41.88 | 50.99 |
Os12t0638300-01 | Rice | extracellular, plasma membrane | 48.54 | 50.94 |
TraesCS4B01G029600.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.7 | 50.42 |
Zm00001d013529_P002 | Maize | plasma membrane | 48.21 | 50.25 |
TraesCS4D01G026800.1 | Wheat | golgi, unclear | 48.54 | 50.17 |
TraesCS4A01G283900.1 | Wheat | golgi, unclear | 48.38 | 49.92 |
Os03t0687000-02 | Rice | plasma membrane | 47.56 | 49.91 |
EER91066 | Sorghum | cytosol, peroxisome, plasma membrane | 47.89 | 49.75 |
Zm00001d033528_P003 | Maize | cytosol, peroxisome, plasma membrane | 47.56 | 49.75 |
HORVU4Hr1G004460.1 | Barley | cytosol, peroxisome, plasma membrane | 48.21 | 49.42 |
TraesCS2A01G045500.1 | Wheat | plasma membrane | 48.05 | 49.42 |
Zm00001d031213_P001 | Maize | plasma membrane | 40.75 | 49.31 |
TraesCS2D01G044200.1 | Wheat | plasma membrane | 47.89 | 49.25 |
TraesCS2B01G057700.1 | Wheat | plasma membrane | 47.89 | 49.25 |
GSMUA_Achr5P15030_001 | Banana | cytosol | 37.5 | 48.73 |
TraesCS5A01G004400.1 | Wheat | cytosol, nucleus, plasma membrane | 48.05 | 48.37 |
TraesCS5D01G012500.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.89 | 48.28 |
TraesCS5B01G001100.1 | Wheat | cytosol, nucleus, plasma membrane | 47.4 | 48.11 |
HORVU5Hr1G000800.3 | Barley | cytosol, peroxisome, plasma membrane | 47.08 | 48.01 |
Os12t0638200-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 45.29 | 47.45 |
TraesCS2D01G044000.1 | Wheat | plasma membrane | 45.94 | 47.01 |
TraesCS5A01G037900.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.75 | 46.75 |
TraesCS5D01G045300.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.59 | 46.74 |
TraesCS2B01G057600.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.78 | 46.61 |
HORVU7Hr1G018540.1 | Barley | cytosol, nucleus, plasma membrane | 45.62 | 45.77 |
KXG24141 | Sorghum | cytosol, peroxisome, plasma membrane | 43.99 | 45.62 |
EES16414 | Sorghum | cytosol, peroxisome, plasma membrane | 44.16 | 45.56 |
TraesCS5B01G039100.1 | Wheat | cytosol, nucleus, plasma membrane | 45.29 | 45.15 |
AT1G69870.1 | Thale cress | cytosol, nucleus, plasma membrane | 44.81 | 44.52 |
EER98133 | Sorghum | plasma membrane | 46.75 | 44.24 |
HORVU2Hr1G006820.2 | Barley | golgi, plasma membrane | 46.43 | 41.69 |
AT1G27080.1 | Thale cress | cytosol, golgi, plasma membrane | 38.64 | 41.32 |
AT1G69860.1 | Thale cress | plasma membrane | 34.09 | 37.84 |
AT5G28470.2 | Thale cress | plasma membrane | 33.93 | 37.25 |
AT1G68570.1 | Thale cress | cytosol, peroxisome, plasma membrane | 33.93 | 35.07 |
AT3G45650.2 | Thale cress | plasma membrane | 31.49 | 33.22 |
AT3G16180.1 | Thale cress | plasma membrane | 31.82 | 33.16 |
AT3G45660.2 | Thale cress | plasma membrane | 30.03 | 32.01 |
AT1G52190.1 | Thale cress | cytosol, peroxisome, plasma membrane | 31.01 | 31.47 |
AT3G45720.1 | Thale cress | plasma membrane | 27.6 | 30.63 |
AT3G45700.1 | Thale cress | plasma membrane | 27.11 | 30.47 |
AT3G45680.1 | Thale cress | plasma membrane | 27.6 | 30.47 |
AT5G11570.1 | Thale cress | plasma membrane | 23.54 | 30.15 |
AT3G45690.1 | Thale cress | plasma membrane | 24.68 | 29.46 |
AT3G45710.1 | Thale cress | plasma membrane | 26.46 | 29.11 |
Protein Annotations
MapMan:24.2.2.9 | EntrezGene:836389 | UniProt:A0A178UEQ7 | ProteinID:AED97642.1 | EMBL:AK316918 | ArrayExpress:AT5G62680 |
EnsemblPlantsGene:AT5G62680 | RefSeq:AT5G62680 | TAIR:AT5G62680 | RefSeq:AT5G62680-TAIR-G | EnsemblPlants:AT5G62680.1 | TAIR:AT5G62680.1 |
Unigene:At.68527 | ProteinID:BAA97215.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 |
GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009628 | GO:GO:0016020 |
GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | GO:GO:0080167 | GO:GO:0090448 | GO:GO:0090449 |
GO:GO:1901349 | InterPro:IPR020846 | InterPro:MFS_dom | InterPro:MFS_trans_sf | RefSeq:NP_201074.1 | ProteinID:OAO92288.1 |
PFAM:PF00854 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
PO:PO:0025022 | PO:PO:0025281 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF59 | UniProt:Q9LV10 |
SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0000048CCB | SEG:seg | : | : |
Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
Coordinates
chr5:-:25165137..25168060
Molecular Weight (calculated)
67894.8 Da
IEP (calculated)
9.267
GRAVY (calculated)
0.284
Length
616 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.