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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84344 Canola plasma membrane 96.51 96.51
CDY30731 Canola plasma membrane 95.68 96.16
CDY00315 Canola plasma membrane 96.51 94.93
CDY45756 Canola plasma membrane 89.53 94.4
AT5G62680.1 Thale cress golgi, peroxisome, vacuole 91.53 89.45
CDX87266 Canola peroxisome 83.72 87.96
CDY16763 Canola peroxisome 83.55 87.63
CDY36913 Canola cytosol, peroxisome, plasma membrane 79.9 78.21
CDY51783 Canola cytosol, peroxisome, plasma membrane 78.24 78.11
CDY21805 Canola cytosol, peroxisome, plasma membrane 79.07 76.65
CDX83027 Canola cytosol, peroxisome, plasma membrane 75.91 75.91
CDY69433 Canola golgi, peroxisome, plastid 79.73 75.71
CDX68450 Canola cytosol, peroxisome, plasma membrane 77.08 75.45
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 69.27 70.32
CDY21692 Canola plasma membrane 61.3 64.29
CDY09846 Canola plasma membrane 45.68 64.1
CDY26715 Canola plasma membrane 61.46 63.79
CDX83801 Canola cytosol, peroxisome, plasma membrane 62.62 63.79
CDX81902 Canola cytosol, peroxisome, plasma membrane 62.13 63.18
CDX96690 Canola plasma membrane 61.79 61.28
KRH03408 Soybean cytosol, peroxisome, plasma membrane 57.81 58.78
KRH56970 Soybean cytosol, peroxisome, plasma membrane 57.48 57.96
Solyc03g113420.2.1 Tomato plasma membrane 56.48 57.92
PGSC0003DMT400065196 Potato plasma membrane 56.64 57.7
KRH56968 Soybean plasma membrane 54.65 55.2
KRH03412 Soybean plasma membrane 53.65 55.12
KRH56969 Soybean plasma membrane 55.81 54.99
KRH03409 Soybean plasma membrane 55.81 54.9
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 49.0 52.68
GSMUA_Achr4P22320_001 Banana plasma membrane 42.03 50.0
Zm00001d013529_P002 Maize plasma membrane 48.84 49.75
Os03t0687000-02 Rice plasma membrane 48.51 49.74
Os12t0638300-01 Rice extracellular, plasma membrane 48.51 49.74
GSMUA_Achr5P15030_001 Banana cytosol 39.04 49.58
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 48.34 49.41
TraesCS4D01G026800.1 Wheat golgi, unclear 48.84 49.33
TraesCS4A01G283900.1 Wheat golgi, unclear 48.67 49.08
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 48.51 49.08
EER91066 Sorghum cytosol, peroxisome, plasma membrane 48.17 48.9
Zm00001d031213_P001 Maize plasma membrane 41.2 48.72
TraesCS2A01G045500.1 Wheat plasma membrane 48.34 48.58
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 48.17 48.25
TraesCS2D01G044200.1 Wheat plasma membrane 48.01 48.25
TraesCS2B01G057700.1 Wheat plasma membrane 47.84 48.08
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 48.17 47.39
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 48.01 47.3
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 47.51 47.12
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 47.01 46.85
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 47.84 46.75
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 47.67 46.74
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 45.51 46.6
TraesCS2D01G044000.1 Wheat plasma membrane 45.85 45.85
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 45.68 45.45
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 46.51 45.31
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 45.85 44.95
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 44.35 44.95
EES16414 Sorghum cytosol, peroxisome, plasma membrane 44.35 44.72
EER98133 Sorghum plasma membrane 47.51 43.93
CDY56086 Canola cytosol, peroxisome, plasma membrane 42.36 43.15
CDY53067 Canola cytosol, peroxisome, plasma membrane 42.19 42.76
CDY48389 Canola cytosol, peroxisome, plasma membrane 42.86 42.5
CDY23545 Canola cytosol, peroxisome, plasma membrane 42.69 42.34
CDY40280 Canola plasma membrane 39.7 42.08
CDY25813 Canola cytosol, peroxisome, plasma membrane 39.2 41.55
CDY11647 Canola plastid 42.69 41.52
CDY38767 Canola plastid 42.86 41.48
CDY28441 Canola cytosol, peroxisome, plasma membrane 39.04 41.37
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 46.35 40.67
CDY38766 Canola plasma membrane 34.39 37.57
CDY11648 Canola plasma membrane 34.05 37.21
CDY52480 Canola plasma membrane 28.07 36.66
CDX86198 Canola peroxisome 33.72 35.68
CDY38595 Canola cytosol, peroxisome, plasma membrane 34.55 35.14
CDY05592 Canola plasma membrane 33.22 34.97
CDY52504 Canola plasma membrane 33.22 34.97
CDY04237 Canola cytosol, peroxisome, plasma membrane 33.72 34.12
CDY07377 Canola cytosol, peroxisome, plasma membrane 33.55 33.89
CDY69402 Canola plasma membrane 16.78 33.89
CDX99152 Canola plasma membrane 31.23 33.75
CDY20187 Canola plasma membrane 16.45 33.67
CDY69519 Canola plasma membrane 16.11 33.22
CDY69522 Canola plasma membrane 16.11 33.22
CDY65728 Canola cytosol 10.96 33.17
CDX86030 Canola plasma membrane 14.95 33.09
CDY48147 Canola plasma membrane 30.23 33.03
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 18.94 32.76
CDY54537 Canola cytosol, peroxisome, plasma membrane 33.55 32.69
CDY28371 Canola plasma membrane 25.91 32.1
CDY51257 Canola plastid 25.75 31.89
CDY30141 Canola plasma membrane 31.4 31.87
CDY70561 Canola plasma membrane 28.57 31.62
CDX86031 Canola plasma membrane 8.14 31.61
CDX97728 Canola plasma membrane 31.06 31.53
CDY12696 Canola plasma membrane 26.91 31.33
CDX81495 Canola plasma membrane 26.91 31.21
CDY18499 Canola plasma membrane 28.74 31.06
CDX99151 Canola plasma membrane 27.24 29.55
CDY67993 Canola plasma membrane 26.74 28.96
CDX96007 Canola cytosol, peroxisome, plasma membrane 29.57 25.72
CDX69747 Canola plasma membrane 27.74 10.8
CDY68532 Canola cytosol 0.33 0.37
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078I8M4UniProt:A0A078I8M4EnsemblPlants:CDY45754ProteinID:CDY45754
ProteinID:CDY45754.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00082677001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EEB97DSEG:seg::
Description
BnaC02g42280DBnaC02g42280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8M4]
Coordinates
chrLK032635:+:161641..164091
Molecular Weight (calculated)
66765.5 Da
IEP (calculated)
9.073
GRAVY (calculated)
0.303
Length
602 amino acids
Sequence
(BLAST)
001: MERNPLEVES TDHQKPSSAV YDGSATAVDS VEEEVQETKL VYRGWKVMPF IIGNETFEKL GIIGTLSNLL VYLTAVFNMK SITAATIINA FSGTINFGTF
101: VAAFLCDTYF GRYKTLTVAV IACFLGSLVI LLTAAVPQLH PAPCGTALTC TGPSGGQIAF LLMGLAFLVV GAGGIRPCNL AFGADQFNPK SESGKRGIDS
201: FFNWYFFPFT FAQILSLTLV VYIQSNVSWT IGLTIPVVLM FLACVIFFAG DKLYVKIKAS GSPLASIAQV ITVAIKKRGL KAVKQPWVNL YNYYPLNYAN
301: SKLKYTDQFR FLDKAAILAP EDKLEADGKP TDPWKLCTMQ QVEEVKCIVR VLPIWFAASI YYLTITQQMT YPVFQALQSD RRLGSRGFVI PAATYVVFLM
401: TGMTVFIIFY DRVLVPTLRR ITGIDTGITL LQRIGTGIFF AFERRRTFAL TKPTLGMAPR KGEISSMSAM WLIPQLALAG IAEAFGAIGQ MEFYYKQFPE
501: NMRSFAGSIF YVGAGVSSYL GSFLIAMVHR TTQNSAGGNW LAEDLNKGRL DYFYFMIAGI LAVNFAYFLV MSRWYRYKGS DDEVTTYETN GDAIKQQDKN
601: TV
Best Arabidopsis Sequence Match ( AT5G62680.1 )
(BLAST)
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Arabidopsis Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.