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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86031 Canola plasma membrane 27.65 99.35
CDX86030 Canola plasma membrane 47.58 97.43
AT3G45650.2 Thale cress plasma membrane 88.51 84.42
CDY48147 Canola plasma membrane 76.3 77.13
CDY18499 Canola plasma membrane 64.45 64.45
CDY12696 Canola plasma membrane 59.78 64.41
CDX81495 Canola plasma membrane 59.6 63.97
CDX99151 Canola plasma membrane 61.58 61.8
PGSC0003DMT400019427 Potato endoplasmic reticulum, plasma membrane 20.29 54.07
PGSC0003DMT400056834 Potato endoplasmic reticulum, plasma membrane 19.93 53.37
PGSC0003DMT400016889 Potato plasma membrane 52.24 52.72
VIT_06s0004g03530.t01 Wine grape plasma membrane 54.58 52.69
VIT_06s0004g03520.t01 Wine grape plasma membrane 54.4 52.51
PGSC0003DMT400019424 Potato mitochondrion 31.6 52.38
PGSC0003DMT400019426 Potato plasma membrane 51.89 52.26
Solyc06g075490.1.1 Tomato plasma membrane 51.17 51.91
Solyc06g075500.2.1 Tomato plasma membrane 50.45 51.75
PGSC0003DMT400019420 Potato plasma membrane 50.27 51.28
KRH22952 Soybean plasma membrane 49.73 51.2
PGSC0003DMT400065310 Potato plasma membrane 50.09 50.27
Solyc06g075480.2.1 Tomato plasma membrane 49.55 49.82
Solyc11g072580.1.1 Tomato plasma membrane 49.01 49.73
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 48.29 49.27
PGSC0003DMT400065303 Potato plasma membrane 45.78 48.48
Solyc11g072570.1.1 Tomato plasma membrane 48.11 47.94
Solyc11g072560.1.1 Tomato plasma membrane 43.27 46.89
Solyc06g075440.1.1 Tomato plasma membrane 43.99 46.14
PGSC0003DMT400019419 Potato plasma membrane 40.93 45.06
TraesCS7A01G054100.1 Wheat plasma membrane 44.7 44.38
TraesCS7D01G049400.1 Wheat plasma membrane 44.52 44.29
GSMUA_Achr6P15780_001 Banana plasma membrane 39.5 44.09
GSMUA_Achr10P... Banana plasma membrane 37.7 44.03
TraesCS4A01G440700.1 Wheat plasma membrane 43.99 43.83
TraesCS4A01G440300.1 Wheat plasma membrane 43.09 43.56
TraesCS7D01G049300.1 Wheat plasma membrane 42.91 43.38
TraesCS5B01G152000.1 Wheat plasma membrane 44.17 43.23
TraesCS4A01G440500.1 Wheat plasma membrane 42.73 43.19
TraesCS7A01G054000.2 Wheat plasma membrane 42.73 43.19
TraesCS4A01G440400.1 Wheat plasma membrane 42.37 42.83
TraesCS4A01G440600.1 Wheat plasma membrane 42.37 42.83
TraesCS5D01G158500.1 Wheat plasma membrane 43.81 42.66
TraesCS5A01G153200.1 Wheat plasma membrane 43.99 41.95
TraesCS7D01G119800.1 Wheat plasma membrane 41.65 41.73
TraesCS7D01G120200.1 Wheat cytosol, plasma membrane, vacuole 42.19 41.37
TraesCS7D01G119900.1 Wheat plasma membrane 42.01 41.2
TraesCS7A01G121700.1 Wheat golgi, peroxisome, plasma membrane 42.01 41.12
HORVU7Hr1G025680.3 Barley plasma membrane 42.01 41.05
Os05t0338900-00 Rice plasma membrane 15.08 40.98
TraesCS7B01G020500.1 Wheat plasma membrane 41.29 40.49
HORVU7Hr1G025670.1 Barley plasma membrane 41.11 40.39
HORVU5Hr1G047970.5 Barley mitochondrion 43.45 40.27
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 41.29 39.72
TraesCS7B01G020300.1 Wheat plasma membrane 42.19 39.5
TraesCS7A01G121600.1 Wheat plastid 38.96 39.24
TraesCS7B01G020200.1 Wheat peroxisome, plasma membrane, vacuole 23.52 33.76
CDY38595 Canola cytosol, peroxisome, plasma membrane 35.01 32.94
CDX81902 Canola cytosol, peroxisome, plasma membrane 34.83 32.77
CDY26715 Canola plasma membrane 34.11 32.76
CDY45756 Canola plasma membrane 33.57 32.75
CDY28441 Canola cytosol, peroxisome, plasma membrane 33.39 32.75
CDY40280 Canola plasma membrane 33.39 32.75
CDY25813 Canola cytosol, peroxisome, plasma membrane 33.21 32.57
CDY56086 Canola cytosol, peroxisome, plasma membrane 34.47 32.49
CDY48389 Canola cytosol, peroxisome, plasma membrane 35.37 32.45
CDY21692 Canola plasma membrane 33.21 32.23
CDY09846 Canola plasma membrane 24.78 32.17
CDY53067 Canola cytosol, peroxisome, plasma membrane 34.29 32.15
CDY36913 Canola cytosol, peroxisome, plasma membrane 35.37 32.03
CDX83801 Canola cytosol, peroxisome, plasma membrane 33.93 31.98
CDY23545 Canola cytosol, peroxisome, plasma membrane 34.83 31.96
CDY51783 Canola cytosol, peroxisome, plasma membrane 34.47 31.84
CDY30731 Canola plasma membrane 34.11 31.72
CDY00315 Canola plasma membrane 34.65 31.54
CDY11647 Canola plastid 35.01 31.5
CDX84344 Canola plasma membrane 33.93 31.4
CDX68450 Canola cytosol, peroxisome, plasma membrane 34.65 31.38
CDY38767 Canola plastid 35.01 31.35
CDX83027 Canola cytosol, peroxisome, plasma membrane 33.75 31.23
CDY45754 Canola plasma membrane 33.75 31.23
CDY07377 Canola cytosol, peroxisome, plasma membrane 33.21 31.04
CDY04237 Canola cytosol, peroxisome, plasma membrane 33.03 30.92
CDX96690 Canola plasma membrane 33.57 30.81
CDX87266 Canola peroxisome 31.6 30.72
CDY21805 Canola cytosol, peroxisome, plasma membrane 34.11 30.6
CDY69402 Canola plasma membrane 16.34 30.54
CDY69433 Canola golgi, peroxisome, plastid 34.65 30.44
CDY16763 Canola peroxisome 31.24 30.31
CDY28371 Canola plasma membrane 26.39 30.25
CDY38766 Canola plasma membrane 29.8 30.13
CDY11648 Canola plasma membrane 29.62 29.95
CDY54537 Canola cytosol, peroxisome, plasma membrane 33.21 29.94
CDY52480 Canola plasma membrane 24.78 29.93
CDY51257 Canola plastid 26.03 29.84
CDY65728 Canola cytosol 10.59 29.65
CDY69519 Canola plasma membrane 15.44 29.45
CDY69522 Canola plasma membrane 15.44 29.45
CDY70561 Canola plasma membrane 28.73 29.41
CDY20187 Canola plasma membrane 15.26 28.91
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 17.95 28.74
CDX97728 Canola plasma membrane 30.52 28.67
CDY30141 Canola plasma membrane 30.52 28.67
CDY67993 Canola plasma membrane 28.55 28.6
CDX86198 Canola peroxisome 28.55 27.94
CDY05592 Canola plasma membrane 28.37 27.62
CDY52504 Canola plasma membrane 28.37 27.62
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 29.08 27.32
CDX96007 Canola cytosol, peroxisome, plasma membrane 30.52 24.57
CDX69747 Canola plasma membrane 28.55 10.28
CDY68532 Canola cytosol 0.18 0.19
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078EDP4EnsemblPlants:CDX99152ProteinID:CDX99152ProteinID:CDX99152.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00107312001InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_fam
PANTHER:PTHR11654PANTHER:PTHR11654:SF19SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE762CSEG:seg
Description
BnaA06g18430D
Coordinates
chrLK031908:-:719413..721839
Molecular Weight (calculated)
61058.3 Da
IEP (calculated)
7.474
GRAVY (calculated)
0.441
Length
557 amino acids
Sequence
(BLAST)
001: MAGDAETQTS STKRHGGGWI TFPFMIATLL GLTIAAWGWL LNLIVYLIEE FNVKSIAAAQ ITNIFSGCIC MVPAIGAIAA DSFFGTIPVI SVSAFVALVG
101: VSLLTLTAAL DSLRPNPCDT ASSLCQSPSK SQLGVLYTAI TLASIGTGGT RFTLATAGAN QYEKTKDQGS FFNWFFFTTY LAGAISATAI VYSEDNVSWT
201: FGFGLCVAAN FFSFLVFILG RRFYKHDKPL GSPFTSLLRV IFAAVFKRKA VVSTNEKDYH SESLSMPTNS LRFFNRAALK QEDEVKPDGT VHNPWRLCSV
301: QQVEDFKAVI RIIPLALAII FLSTPIAMQL SLTVLQGLVM DRRLGPNFKI PAGSLQVITL LSTCLFIMVN DRLLYPFYQR LTGKFLTPLQ QVGIGHVFNI
401: LSMAVTAIVE AKRLKIVENG HFLESSSIAD MSVLWLFPPL VIVGIGEAFH FPGNVALCYQ EFPESMRSTA TSITSVVIGI CFYTSTALID LIQRTTAWLP
501: DDINHGRVDN VYWVLVIGGV LNLGYFLVCS WLYKYRNLED DGHEKDVAVS HSTTLSS
Best Arabidopsis Sequence Match ( AT3G45650.1 )
(BLAST)
001: MASSVTGDAE TAISADSSTK RRGGGWITFP FMIATLLGLT IAAWGWLLNL IVYLIEEFNV KSIAAAQIAN IVSGCICMVP AVAAIASDSF FGTIPVISVS
101: AFISLMGVAL LTLTASLDTL RPRPCETASI LCQSPSKTQL GVLYTAITLA SIGTGGTRFT LATAGANQYE KTKDQGSFFN WFFFTTYLAG AISATAIVYT
201: EDNISWTLGF GLSVAANFFS FLVFVSGKRF YKHDKPLGSP FTSLLCVIFA ALRKRKAVVS TNEKDYHNES ITMPTKSFRF FNRAALKQED EVKPDGTIRN
301: PWRLCSVQQV EDFKAVIRII PLALATIFLS TPIAMQLSLT VLQGLVMDRR LGPSFKIPAG SLQVITLLST CLFIIVNDRV LYPFYQKLTG KHLTPLQRVG
401: IGHAFNILSM AVTAIVEAKR LKIVQKGHFL GSSSVADMSV LWLFPPLVIV GIGEAFHFPG NVALCYQEFP ESMRSTATSI TSVVIGICFY TSTALIDLIQ
501: RTTAWLPDDI NHGRVDNVYW ILVIGGVLNL GYFLVCSWLY RYRNLKDDDH KQAANVSH
Arabidopsis Description
NAXT1Nitrate excretion transporter1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSG9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.