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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004320.1-P Field mustard cytosol, peroxisome, plasma membrane 97.47 97.47
CDY65728 Canola cytosol 32.26 95.98
CDY69402 Canola plasma membrane 47.47 94.3
AT1G68570.1 Thale cress cytosol, peroxisome, plasma membrane 93.07 92.45
CDY07377 Canola cytosol, peroxisome, plasma membrane 88.85 88.25
CDY54537 Canola cytosol, peroxisome, plasma membrane 91.22 87.38
CDY04237 Canola cytosol, peroxisome, plasma membrane 85.3 84.87
KRH75378 Soybean plasma membrane 73.82 75.87
KRH75379 Soybean plasma membrane 58.11 71.67
Solyc05g009500.2.1 Tomato plasma membrane 69.09 71.38
VIT_01s0011g03400.t01 Wine grape plasma membrane 70.27 71.36
PGSC0003DMT400037693 Potato plasma membrane 68.58 70.0
GSMUA_Achr5P24480_001 Banana plasma membrane 66.89 67.81
CDX96007 Canola cytosol, peroxisome, plasma membrane 77.36 66.19
EER88193 Sorghum cytosol, golgi, peroxisome 61.32 61.01
Os06t0264500-01 Rice extracellular 61.32 60.8
Zm00001d045667_P001 Maize cytosol, nucleus, peroxisome 60.98 60.77
TraesCS7A01G206400.1 Wheat cytosol, nucleus, peroxisome 62.67 60.03
TraesCS7B01G113600.2 Wheat cytosol, nucleus, peroxisome 61.99 59.87
HORVU7Hr1G042120.1 Barley cytosol 62.16 59.64
TraesCS7D01G209200.1 Wheat cytosol, nucleus, peroxisome 62.16 59.55
CDY69522 Canola plasma membrane 19.93 40.41
CDY69519 Canola plasma membrane 19.93 40.41
CDY20187 Canola plasma membrane 19.93 40.14
CDY56086 Canola cytosol, peroxisome, plasma membrane 38.85 38.92
CDX97728 Canola plasma membrane 38.51 38.45
CDY53067 Canola cytosol, peroxisome, plasma membrane 38.51 38.38
CDY09846 Canola plasma membrane 27.7 38.23
CDY25813 Canola cytosol, peroxisome, plasma membrane 36.49 38.03
CDY26715 Canola plasma membrane 37.16 37.93
CDY40280 Canola plasma membrane 36.32 37.85
CDY30141 Canola plasma membrane 37.84 37.77
CDY11647 Canola plastid 39.36 37.64
CDY70561 Canola plasma membrane 34.46 37.5
CDY38767 Canola plastid 39.36 37.46
CDX81902 Canola cytosol, peroxisome, plasma membrane 37.33 37.33
CDY28441 Canola cytosol, peroxisome, plasma membrane 35.81 37.32
CDY23545 Canola cytosol, peroxisome, plasma membrane 38.18 37.23
CDY48389 Canola cytosol, peroxisome, plasma membrane 38.01 37.07
CDX83801 Canola cytosol, peroxisome, plasma membrane 36.99 37.06
CDY28371 Canola plasma membrane 30.41 37.04
CDY21692 Canola plasma membrane 35.81 36.93
CDY51257 Canola plastid 29.9 36.42
CDY45756 Canola plasma membrane 34.29 35.55
CDX99152 Canola plasma membrane 32.94 35.01
CDY36913 Canola cytosol, peroxisome, plasma membrane 36.32 34.96
CDX96690 Canola plasma membrane 35.81 34.93
CDY30731 Canola plasma membrane 35.14 34.72
CDY16763 Canola peroxisome 33.61 34.67
CDY51783 Canola cytosol, peroxisome, plasma membrane 35.3 34.66
CDY00315 Canola plasma membrane 35.81 34.64
CDX86030 Canola plasma membrane 15.88 34.56
CDY45754 Canola plasma membrane 35.14 34.55
CDY52480 Canola plasma membrane 26.86 34.49
CDX84344 Canola plasma membrane 34.97 34.39
CDX81495 Canola plasma membrane 30.07 34.3
CDY12696 Canola plasma membrane 29.9 34.24
CDX87266 Canola peroxisome 33.11 34.21
CDY18499 Canola plasma membrane 32.09 34.11
CDY05592 Canola plasma membrane 32.94 34.09
CDY52504 Canola plasma membrane 32.94 34.09
CDX68450 Canola cytosol, peroxisome, plasma membrane 35.3 33.98
CDY48147 Canola plasma membrane 31.25 33.58
CDY11648 Canola plasma membrane 31.25 33.58
CDX86198 Canola peroxisome 32.26 33.57
CDX83027 Canola cytosol, peroxisome, plasma membrane 34.12 33.55
CDX86031 Canola plasma membrane 8.78 33.55
CDY38766 Canola plasma membrane 30.91 33.21
CDY69433 Canola golgi, peroxisome, plastid 35.14 32.81
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 19.26 32.76
CDY21805 Canola cytosol, peroxisome, plasma membrane 34.12 32.53
CDY67993 Canola plasma membrane 30.24 32.19
CDX99151 Canola plasma membrane 29.39 31.35
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 30.07 30.02
CDX69747 Canola plasma membrane 31.08 11.9
CDY68532 Canola cytosol 0.51 0.56
Protein Annotations
MapMan:11.6.4.1MapMan:24.2.2.9GO:A0A078HJG2UniProt:A0A078HJG2EnsemblPlants:CDY38595ProteinID:CDY38595
ProteinID:CDY38595.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00066281001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF178SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EE1485SEG:seg::::
Description
BnaC06g30180DBnaC06g30180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJG2]
Coordinates
chrLK032427:+:204381..208040
Molecular Weight (calculated)
65704.4 Da
IEP (calculated)
9.234
GRAVY (calculated)
0.243
Length
592 amino acids
Sequence
(BLAST)
001: MEEQSKNKIS EEEKQLHGKR SRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFGGTSSLT PLLGAFVADS FAGRFWTITF
101: ASIIYQIGMT LLTISAILPT LRPPPCKGEE VCVVADTAQL SVLYIALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAALVAVT
201: VLVYIQDNVG WGLGLGIPTV AMFLSVIAFV GGFKLYRHLD PSGSPFTRLI QVAVAAFRKR KLMMVSDPTL LYTNDEIDAP ISLGGILTHT KHMSFLDKAA
301: IVTEQDNLKP GQIPNPWRLT TVHRVEEFKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTKSF QIPAGSMSVF TTVAMLSTIV FYDRVLVKIA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEIKRKSV AIEHGLLDKP HTMVPISFLW LVPQYSLHGI AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHRF SAKPDGSNWL PDNNLNRGRL EYFYWVITVL QAVNLVYYLW CAKIYTYKPV QVHHIKEDTS PVNNELQLSN KN
Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)
001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
Arabidopsis Description
NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.