CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65728	Canola	cytosol	26.59	92.46
CDY38595	Canola	cytosol, peroxisome, plasma membrane	66.19	77.36
AT1G68570.1	Thale cress	cytosol, peroxisome, plasma membrane	64.31	74.66
CDY07377	Canola	cytosol, peroxisome, plasma membrane	61.42	71.31
CDY69402	Canola	plasma membrane	30.35	70.47
CDY54537	Canola	cytosol, peroxisome, plasma membrane	62.57	70.06
CDY04237	Canola	cytosol, peroxisome, plasma membrane	59.54	69.24
KRH75378	Soybean	plasma membrane	53.03	63.72
Solyc05g009500.2.1	Tomato	plasma membrane	50.29	60.73
PGSC0003DMT400037693	Potato	plasma membrane	50.29	60.0
VIT_01s0011g03400.t01	Wine grape	plasma membrane	50.29	59.69
KRH75379	Soybean	plasma membrane	41.19	59.38
GSMUA_Achr5P24480_001	Banana	plasma membrane	47.69	56.51
Os06t0264500-01	Rice	extracellular	44.22	51.26
EER88193	Sorghum	cytosol, golgi, peroxisome	43.79	50.92
Zm00001d045667_P001	Maize	cytosol, nucleus, peroxisome	43.06	50.17
HORVU7Hr1G042120.1	Barley	cytosol	43.79	49.11
TraesCS7B01G113600.2	Wheat	cytosol, nucleus, peroxisome	43.5	49.1
TraesCS7A01G206400.1	Wheat	cytosol, nucleus, peroxisome	43.64	48.87
TraesCS7D01G209200.1	Wheat	cytosol, nucleus, peroxisome	43.64	48.87
CDX97728	Canola	plasma membrane	28.18	32.88
CDY40280	Canola	plasma membrane	26.88	32.75
CDY09846	Canola	plasma membrane	20.23	32.63
CDY30141	Canola	plasma membrane	27.89	32.55
CDX81902	Canola	cytosol, peroxisome, plasma membrane	27.6	32.26
CDY56086	Canola	cytosol, peroxisome, plasma membrane	27.46	32.15
CDY26715	Canola	plasma membrane	26.88	32.07
CDY25813	Canola	cytosol, peroxisome, plasma membrane	26.3	32.04
CDX83801	Canola	cytosol, peroxisome, plasma membrane	27.17	31.81
CDY21692	Canola	plasma membrane	26.3	31.71
CDY53067	Canola	cytosol, peroxisome, plasma membrane	27.17	31.65
CDY69519	Canola	plasma membrane	13.29	31.51
CDY69522	Canola	plasma membrane	13.29	31.51
CDY28441	Canola	cytosol, peroxisome, plasma membrane	25.72	31.34
CDY11647	Canola	plastid	27.89	31.18
CDY23545	Canola	cytosol, peroxisome, plasma membrane	27.31	31.14
CDY70561	Canola	plasma membrane	24.42	31.07
CDY38767	Canola	plastid	27.89	31.03
CDY48389	Canola	cytosol, peroxisome, plasma membrane	27.17	30.97
CDY20187	Canola	plasma membrane	13.01	30.61
CDX99152	Canola	plasma membrane	24.57	30.52
CDY45756	Canola	plasma membrane	25.14	30.47
CDY05592	Canola	plasma membrane	24.86	30.07
CDY52504	Canola	plasma membrane	24.86	30.07
CDX96690	Canola	plasma membrane	26.3	29.98
CDY30731	Canola	plasma membrane	25.87	29.88
CDY16763	Canola	peroxisome	24.71	29.79
CDY00315	Canola	plasma membrane	26.3	29.74
CDX86031	Canola	plasma membrane	6.65	29.68
CDX87266	Canola	peroxisome	24.57	29.67
CDY28371	Canola	plasma membrane	20.81	29.63
CDY45754	Canola	plasma membrane	25.72	29.57
CDY51257	Canola	plastid	20.66	29.42
CDY36913	Canola	cytosol, peroxisome, plasma membrane	26.01	29.27
CDX84344	Canola	plasma membrane	25.43	29.24
CDY18499	Canola	plasma membrane	23.41	29.08
CDY51783	Canola	cytosol, peroxisome, plasma membrane	25.29	29.02
CDX86198	Canola	peroxisome	23.7	28.82
CDX68450	Canola	cytosol, peroxisome, plasma membrane	25.58	28.78
CDY11648	Canola	plasma membrane	22.83	28.68
CDY38766	Canola	plasma membrane	22.83	28.68
CDX83027	Canola	cytosol, peroxisome, plasma membrane	24.86	28.57
CDY48147	Canola	plasma membrane	22.69	28.49
CDY67993	Canola	plasma membrane	22.83	28.42
CDY52480	Canola	plasma membrane	18.93	28.42
CDX86030	Canola	plasma membrane	11.13	28.31
CDX81495	Canola	plasma membrane	21.1	28.13
CDY12696	Canola	plasma membrane	20.95	28.05
CDY16764	Canola	cytosol, mitochondrion, plasma membrane, plastid	23.84	27.82
CDY69433	Canola	golgi, peroxisome, plastid	25.29	27.6
CDX91207	Canola	cytosol, endoplasmic reticulum, plasma membrane	13.87	27.59
CDY21805	Canola	cytosol, peroxisome, plasma membrane	24.42	27.21
CDX99151	Canola	plasma membrane	21.53	26.85
CDX69747	Canola	plasma membrane	23.12	10.35
CDY68532	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:A0A078E4H3	EnsemblPlants:CDX96007	ProteinID:CDX96007	ProteinID:CDX96007.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00102037001	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
PANTHER:PTHR11654	PANTHER:PTHR11654:SF178	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0004EF1936	SEG:seg

Description

BnaA07g27240D

Coordinates

chrLK031892:-:559179..565529

Molecular Weight (calculated)

77239.3 Da

IEP (calculated)

9.356

GRAVY (calculated)

0.145

Length

692 amino acids

Sequence
(BLAST)

001: MEEQSKNKIS EEEKQLHGKR SRPKGGLITM PFIFANEICE KLAVIGFHAN MISYLTTQLH LPLTKAANTL TNFGGTSSLT PLLGAFVADS FAGRFWTITF
101: ASIIYQIGMT LLTISAILPT LRPPPCKGEE VCVVADTAQL SVLYIALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNCLGIS GSFVFFSLGR
201: LYVFGKIKFS NTYYILQFCR RMTTSKSGKK YPARLYPEGK CPLQSGSMNH NCHLANLQMV EEVVGLDAWE SIKTSSVGVI LRLKELNYTW SAKAVHHLLT
301: NQLVVNNIHE ICSCLNLQIT QSDSAASVNR ERISHKNNII IDACQYISCV VVWWYLGGFS PLTSRVQTQQ RDFSTPRVRV VFIEFASILR DENQRVIICL
401: IASISLTTGK LLASESTFFL DKAAIITEQD NLKPGQIPNP WRLSTVHRVE ELKSVIRMGP IGASGILLIT AYAQQGTFSL QQAKTMNRHL TESFQIPAGS
501: MSVFTTVAML STIVFYDRVF VKIARKFTGL ERGITFLHRM GIGFVISIVA TLVAGFVEIK RKRVAIDHGL LDKPHTMVPI SFLWLVPQYS LHGIAEAFMS
601: IGHLEFFYDQ APESMRSTAT ALFWMAISIG NYVSTLLVTL VHRFSAKPDG SNWLPDNNLN RGRLEYWLLG DHCVTSARKR IVRLRMNCSY PI

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.