Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY12696 Canola plasma membrane 94.99 95.36
CDY18499 Canola plasma membrane 88.63 82.59
AT3G45690.1 Thale cress plasma membrane 76.49 76.94
AT3G45680.1 Thale cress plasma membrane 81.31 75.63
AT3G45700.1 Thale cress plasma membrane 74.37 70.44
AT3G45710.1 Thale cress plasma membrane 74.57 69.11
CDX99151 Canola plasma membrane 73.6 68.83
CDX86030 Canola plasma membrane 31.98 61.03
CDX99152 Canola plasma membrane 63.97 59.6
CDY48147 Canola plasma membrane 60.31 56.81
CDX86031 Canola plasma membrane 15.41 51.61
Solyc06g075490.1.1 Tomato plasma membrane 50.29 47.54
PGSC0003DMT400016889 Potato plasma membrane 50.1 47.1
PGSC0003DMT400019426 Potato plasma membrane 50.1 47.02
Solyc06g075500.2.1 Tomato plasma membrane 49.13 46.96
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 48.36 45.97
PGSC0003DMT400019420 Potato plasma membrane 48.17 45.79
Solyc06g075480.2.1 Tomato plasma membrane 48.75 45.67
PGSC0003DMT400065310 Potato plasma membrane 48.55 45.41
Solyc11g072580.1.1 Tomato plasma membrane 47.98 45.36
KRH22952 Soybean plasma membrane 46.82 44.92
PGSC0003DMT400065303 Potato plasma membrane 45.09 44.49
VIT_06s0004g03520.t01 Wine grape plasma membrane 48.94 44.02
VIT_06s0004g03530.t01 Wine grape plasma membrane 48.94 44.02
PGSC0003DMT400056834 Potato endoplasmic reticulum, plasma membrane 17.53 43.75
Solyc11g072560.1.1 Tomato plasma membrane 42.2 42.61
PGSC0003DMT400019427 Potato endoplasmic reticulum, plasma membrane 17.15 42.58
Solyc11g072570.1.1 Tomato plasma membrane 45.86 42.58
PGSC0003DMT400019424 Potato mitochondrion 27.36 42.26
Solyc06g075440.1.1 Tomato plasma membrane 42.39 41.43
PGSC0003DMT400019419 Potato plasma membrane 39.69 40.71
GSMUA_Achr6P15780_001 Banana plasma membrane 38.34 39.88
GSMUA_Achr10P... Banana plasma membrane 35.45 38.57
TraesCS7A01G121700.1 Wheat golgi, peroxisome, plasma membrane 42.0 38.31
TraesCS7B01G020500.1 Wheat plasma membrane 41.81 38.2
TraesCS7D01G120200.1 Wheat cytosol, plasma membrane, vacuole 41.81 38.2
TraesCS5B01G152000.1 Wheat plasma membrane 41.81 38.14
TraesCS7A01G054100.1 Wheat plasma membrane 41.04 37.97
TraesCS7D01G049400.1 Wheat plasma membrane 40.85 37.86
TraesCS4A01G440700.1 Wheat plasma membrane 40.66 37.75
TraesCS7D01G119900.1 Wheat plasma membrane 41.23 37.68
TraesCS5D01G158500.1 Wheat plasma membrane 41.23 37.41
TraesCS7D01G119800.1 Wheat plasma membrane 40.08 37.41
HORVU7Hr1G025670.1 Barley plasma membrane 40.85 37.39
HORVU7Hr1G025680.3 Barley plasma membrane 40.85 37.19
TraesCS5A01G153200.1 Wheat plasma membrane 41.81 37.16
TraesCS7A01G054000.2 Wheat plasma membrane 38.73 36.48
TraesCS4A01G440400.1 Wheat plasma membrane 38.54 36.3
TraesCS7D01G049300.1 Wheat plasma membrane 38.54 36.3
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 40.27 36.1
TraesCS7B01G020300.1 Wheat plasma membrane 41.23 35.97
TraesCS4A01G440600.1 Wheat plasma membrane 38.15 35.93
TraesCS4A01G440500.1 Wheat plasma membrane 37.96 35.75
TraesCS4A01G440300.1 Wheat plasma membrane 37.76 35.57
HORVU5Hr1G047970.5 Barley mitochondrion 40.85 35.27
TraesCS7A01G121600.1 Wheat plastid 37.38 35.08
TraesCS7B01G020200.1 Wheat peroxisome, plasma membrane, vacuole 24.86 33.25
Os05t0338900-00 Rice plasma membrane 13.1 33.17
CDY69402 Canola plasma membrane 18.3 31.88
CDY09846 Canola plasma membrane 25.63 31.0
CDY20187 Canola plasma membrane 17.53 30.95
CDY69519 Canola plasma membrane 17.34 30.82
CDY69522 Canola plasma membrane 17.34 30.82
CDY65728 Canola cytosol 11.75 30.65
CDY26715 Canola plasma membrane 33.91 30.34
CDY28441 Canola cytosol, peroxisome, plasma membrane 33.14 30.28
CDY40280 Canola plasma membrane 33.14 30.28
CDX81902 Canola cytosol, peroxisome, plasma membrane 34.49 30.24
CDX83801 Canola cytosol, peroxisome, plasma membrane 34.3 30.12
CDY38595 Canola cytosol, peroxisome, plasma membrane 34.3 30.07
CDY25813 Canola cytosol, peroxisome, plasma membrane 32.76 29.93
CDY21692 Canola plasma membrane 32.76 29.62
CDY56086 Canola cytosol, peroxisome, plasma membrane 33.72 29.61
CDY48389 Canola cytosol, peroxisome, plasma membrane 34.49 29.49
CDY53067 Canola cytosol, peroxisome, plasma membrane 33.72 29.46
CDY23545 Canola cytosol, peroxisome, plasma membrane 34.3 29.32
CDY70561 Canola plasma membrane 30.44 29.04
CDY45756 Canola plasma membrane 31.6 28.72
CDX96690 Canola plasma membrane 33.33 28.5
CDY38767 Canola plastid 34.1 28.46
CDY11647 Canola plastid 33.72 28.27
CDY30731 Canola plasma membrane 32.37 28.05
CDY07377 Canola cytosol, peroxisome, plasma membrane 32.18 28.02
CDY04237 Canola cytosol, peroxisome, plasma membrane 31.98 27.9
CDY28371 Canola plasma membrane 25.82 27.57
CDX97728 Canola plasma membrane 31.41 27.49
CDY00315 Canola plasma membrane 32.37 27.45
CDY51783 Canola cytosol, peroxisome, plasma membrane 31.79 27.36
CDY54537 Canola cytosol, peroxisome, plasma membrane 32.37 27.18
CDX84344 Canola plasma membrane 31.41 27.08
CDY30141 Canola plasma membrane 30.83 26.98
CDY51257 Canola plastid 25.24 26.95
CDY45754 Canola plasma membrane 31.21 26.91
CDY36913 Canola cytosol, peroxisome, plasma membrane 31.79 26.83
CDX87266 Canola peroxisome 29.48 26.7
CDY52480 Canola plasma membrane 23.7 26.68
CDY69433 Canola golgi, peroxisome, plastid 32.37 26.5
CDY16763 Canola peroxisome 29.29 26.48
CDY21805 Canola cytosol, peroxisome, plasma membrane 31.41 26.25
CDX68450 Canola cytosol, peroxisome, plasma membrane 30.83 26.02
CDY11648 Canola plasma membrane 27.17 25.59
CDY38766 Canola plasma membrane 27.17 25.59
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 17.15 25.57
CDY67993 Canola plasma membrane 27.36 25.54
CDX83027 Canola cytosol, peroxisome, plasma membrane 29.48 25.42
CDX86198 Canola peroxisome 27.55 25.13
CDY05592 Canola plasma membrane 27.36 24.83
CDY52504 Canola plasma membrane 27.36 24.83
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 26.59 23.27
CDX96007 Canola cytosol, peroxisome, plasma membrane 28.13 21.1
CDX69747 Canola plasma membrane 27.17 9.12
CDY68532 Canola cytosol 0.0 0.0
Protein Annotations
MapMan:24.2.2.9GO:A0A078CXD2EnsemblPlants:CDX81495ProteinID:CDX81495ProteinID:CDX81495.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006857GO:GO:0008150GO:GO:0016020
GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00135112001InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_fam
ScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF19InterPro:PTR2_symporter_CSSUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EE5A1FSEG:seg::::
Description
BnaC02g17990D
Coordinates
chrLK031825:+:276062..277926
Molecular Weight (calculated)
56215.2 Da
IEP (calculated)
9.543
GRAVY (calculated)
0.489
Length
519 amino acids
Sequence
(BLAST)
001: MAGPVSGDTE AQCARDPSSK PGGWITFPFM MATLLGMSIT SFGWVLNLIV FLIAEFNIKS IAAAQISNIV NGCLSMLPLV AAILADSFFG NILVISASTF
101: ISLTGILLLT LIASLDLLKP IPCATGSILC QSPTALQLGI LYIALVLVTT GAGGTRFTLA SAGANQYDKP KDQGSFFNWY FLTLYAGAIT GATAIVYTQD
201: NASWKLGFGL CAAANFVSFV VFVSGKKLYK HEKPMGSPFK SLISVVVAAT VKRKAVISSK EQDYHQGLAK TSPAIIPSKS YGFLNRAALK TEDGDGSVNN
301: IWRMCSVQEV EDFKAILRLL PLWVAIIFVS TPMVMQTSLM VLQALVTDRA LGPHFKVPAG SLQVIIMTSA STFIIINNWL VYPMYQKLTG KRLTPLQKVG
401: IGQVLTILSM AVSAVVEAKR LKTVENGHPM SVLWLNTATS LTSLVIGISF YLSTALISLL QRTTKWLPND INSGRVDNVY WVLVVAGVLN FGYFLVCSWF
501: YKYRNLQGDN EQDPKDVST
Best Arabidopsis Sequence Match ( AT3G45680.1 )
(BLAST)
001: MASLVSGDKE AQISGDPGSK RGGWITFPFM LATLLGLSVT SFGWVMNLIV FLIEEFNIKS IAAAQISNVA NGCLSMLPVV AAILADSFFG NIPVIAASSF
101: ISLLGIVLLT LIASLDYLRP RPCEAGSVLC TPPSKLHLGI LYTALALVTT GAGGTRFTMA SAGANQYEKP KEQGSFFNWY FLTLYAGAIT GATAIVYIQD
201: NASWKLGFGL CAAANLISFI VFVSGKRYYK HDKPMGSPFT SLIRVVVSAT VKRKAVISCN EEDYHHYGLE KEVKTSAAMP SKSFRFLNRA ALMTKDDLNQ
301: KEGSVNNIWR LCSVQEVEDF KAILRVFPLW LSIIFVSTPM VMQTSLIVLQ ALVTDRGLGP NFKVPAGSLQ VIIIITACIV IIMNNWLVFP MYKKLTHKLL
401: TPLQKVGIGQ VLTILSMALS AVVEAKRLKT VENGHPMSVL WLFPPLVIVG IGEAFQFPAN IELFYGEFPE SLRNTATSLT SVVIGISFYL STALIDLIQR
501: TTAWLPNDIN HGRVDNVYWL LVIGGILNFG YFLVCSWVYK YRNLKDNDQE QDPKDGTM
Arabidopsis Description
NPF2.3Protein NRT1/ PTR FAMILY 2.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M175]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.