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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • extracellular 2
  • vacuole 3
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400019420 Potato plasma membrane 87.0 87.0
Solyc06g075480.2.1 Tomato plasma membrane 77.47 76.35
Solyc06g075500.2.1 Tomato plasma membrane 75.27 75.69
Solyc06g075490.1.1 Tomato plasma membrane 73.26 72.86
Solyc11g072580.1.1 Tomato plasma membrane 54.03 53.73
VIT_06s0004g03520.t01 Wine grape plasma membrane 56.41 53.38
VIT_06s0004g03530.t01 Wine grape plasma membrane 56.04 53.03
KRH22952 Soybean plasma membrane 50.55 51.02
Solyc11g072570.1.1 Tomato plasma membrane 52.01 50.8
Solyc06g075440.1.1 Tomato plasma membrane 48.35 49.72
Solyc11g072560.1.1 Tomato plasma membrane 46.52 49.42
CDY18499 Canola plasma membrane 50.0 49.01
Bra021295.1-P Field mustard plasma membrane 49.63 48.65
AT3G45700.1 Thale cress plasma membrane 48.72 48.54
CDX81495 Canola plasma membrane 45.97 48.36
CDY12696 Canola plasma membrane 45.79 48.36
CDX99152 Canola plasma membrane 49.27 48.29
AT3G45710.1 Thale cress plasma membrane 49.27 48.04
AT3G45680.1 Thale cress plasma membrane 49.08 48.03
CDY48147 Canola plasma membrane 47.99 47.55
Bra033955.1-P Field mustard plasma membrane 47.8 47.54
Bra033836.1-P Field mustard plasma membrane 45.24 47.32
Os05t0338900-00 Rice plasma membrane 17.77 47.32
AT3G45690.1 Thale cress plasma membrane 44.51 47.09
AT3G45720.1 Thale cress plasma membrane 47.8 47.03
CDX86030 Canola plasma membrane 23.26 46.69
AT3G45650.2 Thale cress plasma membrane 49.82 46.58
CDX99151 Canola plasma membrane 47.25 46.49
CDX86031 Canola plasma membrane 13.19 46.45
AT3G45660.2 Thale cress plasma membrane 48.9 46.19
GSMUA_Achr6P15780_001 Banana plasma membrane 41.76 45.69
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 47.07 44.39
TraesCS7D01G119800.1 Wheat plasma membrane 44.69 43.88
GSMUA_Achr10P... Banana plasma membrane 37.91 43.4
TraesCS7D01G119900.1 Wheat plasma membrane 45.05 43.31
TraesCS4A01G440700.1 Wheat plasma membrane 44.14 43.11
TraesCS5B01G152000.1 Wheat plasma membrane 44.51 42.71
TraesCS7D01G120200.1 Wheat cytosol, plasma membrane, vacuole 44.32 42.61
TraesCS7D01G049400.1 Wheat plasma membrane 43.59 42.5
TraesCS7A01G054100.1 Wheat plasma membrane 43.59 42.42
TraesCS7B01G020500.1 Wheat plasma membrane 43.96 42.25
TraesCS7A01G121700.1 Wheat golgi, peroxisome, plasma membrane 43.77 42.0
HORVU7Hr1G025670.1 Barley plasma membrane 43.41 41.8
TraesCS5A01G153200.1 Wheat plasma membrane 44.69 41.78
TraesCS5D01G158500.1 Wheat plasma membrane 43.59 41.61
TraesCS7B01G020300.1 Wheat plasma membrane 45.24 41.51
TraesCS4A01G440300.1 Wheat plasma membrane 41.76 41.38
HORVU7Hr1G025680.3 Barley plasma membrane 42.86 41.05
TraesCS7A01G121600.1 Wheat plastid 41.39 40.87
TraesCS4A01G440500.1 Wheat plasma membrane 41.21 40.83
TraesCS4A01G440600.1 Wheat plasma membrane 41.03 40.65
TraesCS7D01G049300.1 Wheat plasma membrane 41.03 40.65
TraesCS7A01G054000.2 Wheat plasma membrane 40.84 40.47
TraesCS4A01G440400.1 Wheat plasma membrane 40.84 40.47
HORVU5Hr1G047970.5 Barley mitochondrion 42.86 38.94
TraesCS7B01G020200.1 Wheat peroxisome, plasma membrane, vacuole 25.27 35.57
Solyc05g009500.2.1 Tomato plasma membrane 34.07 32.46
Solyc12g007220.1.1 Tomato cytosol, peroxisome, plasma membrane 33.88 31.57
Solyc03g113430.2.1 Tomato plasma membrane 33.52 31.28
Solyc03g113420.2.1 Tomato plasma membrane 33.52 31.18
Solyc04g005070.2.1 Tomato plasma membrane 32.23 30.72
Solyc05g006010.2.1 Tomato plasma membrane 32.78 30.6
Solyc05g006000.2.1 Tomato plasma membrane 32.78 30.55
Solyc05g005990.2.1 Tomato plasma membrane 25.64 30.5
Solyc08g066940.2.1 Tomato plasma membrane 28.57 30.41
Solyc06g071570.2.1 Tomato plasma membrane 32.05 30.28
Solyc05g005920.2.1 Tomato plasma membrane 32.23 30.19
Solyc06g005070.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 17.4 30.16
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 16.67 30.03
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 32.78 29.49
Solyc05g005940.2.1 Tomato plasma membrane 31.14 29.36
Solyc05g005980.2.1 Tomato plasma membrane 30.77 29.02
Solyc05g005970.2.1 Tomato plasma membrane 30.59 28.79
Solyc12g044310.1.1 Tomato plasma membrane 33.15 28.78
Solyc03g120560.2.1 Tomato plasma membrane 31.5 28.52
Solyc05g005950.2.1 Tomato plasma membrane 30.04 28.47
Solyc05g005960.2.1 Tomato plasma membrane 28.94 27.43
Solyc03g120550.2.1 Tomato plasma membrane 32.05 27.34
Solyc12g095810.1.1 Tomato plasma membrane 31.68 26.33
Solyc03g113440.2.1 Tomato plasma membrane 26.92 24.66
Solyc05g005910.2.1 Tomato plasma membrane 32.6 23.58
Bra038280.1-P Field mustard plasma membrane 47.07 23.01
Protein Annotations
EnsemblPlants:Solyc06g075450.1.1EnsemblPlantsGene:Solyc06g075450.1Gene3D:1.20.1250.20GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:MFS_trans_sfInterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF19PFAM:PF00854SEG:seg
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0002766B75UniProt:K4C9R0MapMan:24.2.2.9:
Description
No Description!
Coordinates
chr6:-:46829328..46832381
Molecular Weight (calculated)
59297.9 Da
IEP (calculated)
9.243
GRAVY (calculated)
0.568
Length
546 amino acids
Sequence
(BLAST)
001: MEVLSEAQIS RRTGGWITFP FIIASSVGFT LAFGGLTSNL IVYLIKEFNV ESINAAQISN LVNGAGSLAP VVAAIIADSF LGCFTIIWIS SIISLLGAIL
101: LALITTVDSL KPTPCEFGST SCTPIPKIQY VVLYIAIALA TLGNASLRSS LTTMGANQFD KPKDQGIFIN WFFFFVAAST IVASTAILYV EDNVSWKAGF
201: FICVAANVLG AAIFLLGTRF YNNSKPEGSP FTSLARVVVA SIRKRKLPLP STSEDLYQGL MLVEPSKTCR FLNRAAIKSE GDVKPDGSTA KSWKLCTVQE
301: IEDFKTLVKI LPLWSSSFFL GTTIGVQGSL SILQALVMDR HIGPNFQIPA GSMSVFILLS SALFLALFDK VLFPAWKNLS GKSLTPLQRI GVGHVLNFLC
401: MAVSALVESK RLNLAKSNPG SIIVPMSAFW LVPQLALVGI AEAFHVPGQV SLYYQEFPLT LKNLATALIS VLVGIAFYLT TAVIDVVRRT TTWLPGNIND
501: GRLDKMYGVL VVVGVVNFGY YVLCAWFYKY RNIKEVVDHK DSPFHG
Best Arabidopsis Sequence Match ( AT3G45710.1 )
(BLAST)
001: MADSKSGDTE VAHRSSDPSE KRGGWITLPF MLVTLLGMSI TSFGWGMNLI VFLIEEFHIK NIAAAQISNV VNGVVNMLPV VAAILADSFF GNIPVISTST
101: FISLAGTSLL TLITSLNYLM PRPCETGSIL CQSPSKLQLG ILYVALALVI IGSAGTRFTL AAAGANQYKK PKEQGRFFNW FFLALYIGAI TGTTAIVYTQ
201: DNASWKLGFG LCAVANLISF IVFIAGVRFY KHDKPLGSPY TSLIRVLVAA TMKRKAVISS KDEDYHQYGL GKEAKTYTTM PSKSFRFLNR AALKNKEDLN
301: TSGDSSNNMW RLCSVQEVED FKAILRLVPL WAAVMFLSTP VAVQMSMTVL QALVMDRKLS PHFEVSAGSL QVIVLVFGCV FIMLNNWIIY PMYQKLIGKP
401: LTPLQQVGIG HVFTILSMAI SAVVEAKRLK TVENGGHPMS VLWLVPALVM VGIGEAFHFP ANVAVFYGEF PESLKNTATS LTSVVIGISF YLSTAVIDVI
501: QRTTSWLPND INHGRVDNVY WVVVIGGVLN LGYFLVCSWF YKYRNLKDDD HEQDPKDVKT
Arabidopsis Description
NPF2.5Protein NRT1/ PTR FAMILY 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M172]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.