Factsheet for Solyc05g006010.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g006000.2.1	Tomato	plasma membrane	94.02	93.86
PGSC0003DMT400040231	Potato	plasma membrane	92.99	92.83
PGSC0003DMT400040285	Potato	plasma membrane	90.77	90.77
Solyc05g005990.2.1	Tomato	plasma membrane	67.86	86.49
Solyc04g005070.2.1	Tomato	plasma membrane	74.36	75.92
Solyc05g005980.2.1	Tomato	plasma membrane	56.75	57.34
Solyc05g005920.2.1	Tomato	plasma membrane	57.09	57.29
Solyc05g005950.2.1	Tomato	plasma membrane	54.53	55.38
Solyc05g005970.2.1	Tomato	plasma membrane	54.87	55.34
Solyc05g005940.2.1	Tomato	plasma membrane	54.7	55.27
Solyc05g005960.2.1	Tomato	plasma membrane	53.68	54.51
Solyc08g066940.2.1	Tomato	plasma membrane	46.5	53.02
KRH04819	Soybean	plasma membrane	49.23	49.91
VIT_11s0016g03600.t01	Wine grape	plasma membrane	49.23	49.4
KRH16178	Soybean	plasma membrane	46.84	46.84
KRH04899	Soybean	cytosol, peroxisome, plasma membrane	41.71	44.36
Solyc05g005910.2.1	Tomato	plasma membrane	56.75	43.97
Solyc12g007220.1.1	Tomato	cytosol, peroxisome, plasma membrane	42.73	42.66
Solyc12g044310.1.1	Tomato	plasma membrane	41.88	38.95
Solyc03g120560.2.1	Tomato	plasma membrane	39.15	37.98
Solyc05g009500.2.1	Tomato	plasma membrane	35.38	36.13
Solyc03g120550.2.1	Tomato	plasma membrane	39.15	35.78
Solyc06g071570.2.1	Tomato	plasma membrane	34.7	35.12
Solyc12g095810.1.1	Tomato	plasma membrane	39.32	35.01
Solyc03g113430.2.1	Tomato	plasma membrane	34.87	34.87
Solyc03g113420.2.1	Tomato	plasma membrane	34.87	34.75
Solyc06g075500.2.1	Tomato	plasma membrane	31.11	33.52
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	34.7	33.44
Solyc06g071090.1.1	Tomato	endoplasmic reticulum, plasma membrane	17.27	33.33
Solyc06g075450.1.1	Tomato	extracellular, plasma membrane, vacuole	30.6	32.78
Solyc06g075490.1.1	Tomato	plasma membrane	30.26	32.24
Solyc06g075480.2.1	Tomato	plasma membrane	30.43	32.13
Solyc06g075440.1.1	Tomato	plasma membrane	27.52	30.32
Solyc11g072580.1.1	Tomato	plasma membrane	28.03	29.87
Solyc11g072560.1.1	Tomato	plasma membrane	26.15	29.77
Solyc11g072570.1.1	Tomato	plasma membrane	28.03	29.34
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	15.56	28.89
Solyc03g113440.2.1	Tomato	plasma membrane	29.23	28.69
VIT_04s0008g03580.t01	Wine grape	plasma membrane	49.91	24.72

Protein Annotations

EnsemblPlants:Solyc05g006010.2.1	EnsemblPlantsGene:Solyc05g006010.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF150	PFAM:PF00854
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI00027671C3	UniProt:K4BWC8	MapMan:24.2.2.9	:

Description

No Description!

Coordinates

chr5:-:745424..747537

Molecular Weight (calculated)

64944.1 Da

IEP (calculated)

6.684

GRAVY (calculated)

0.357

Length

585 amino acids

Sequence
(BLAST)

001: MGNNTEEKEF LLNHSQNSTK GGLKTIPFII VNESCERLAS FGLQPNMIIY ITKFYNINAA HASVLINLWS AVSNVLSILG AFISDSYIGR FRAVAIGTIS
101: SLIGMLVLWL TTIFPQLRPL PCGQYQHDCN GTTAAQLAAI LCSFGLISIG AGLVRPCSIA LGADQLENKE NPDNERLMDS YFNWFYASIG VAIVFAVTVI
201: VYIQDHFGWQ VGFGVPALLM VLSVSVFLIG SPHYIKAKPK GSLFTGLFQV AVAAFRKRHI NVQLNYNDDS YYKTPESKLL EPSTDFRCLN RACIIEDPNM
301: ELKPDGKASD PWSLCSVEQV KIMKCFLTVL PMWSTCIMLL VSFSQPLSIY QLLTVDRHIT PQFEIPAGSF GMITVLSLTI WMAFYDRVLV PLLSRYTGLP
401: TGISSFSRMG IGLFLGIVAT VLSAITETIR RNKAINAGFE DDPNAMLNMS SMWFVPQLAL YGVAEALNVI GQIEFIYTLF PKTMSSFAAA LYTFGLALAN
501: FINSFLVSVV NSITSGGDNT SWLATNINRG HLDYYCWLMT FLCVINFLYF LAVCRFTDQH HHDGRSSLFP EAEEEHSMNK CFHGA

Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)

001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV

Arabidopsis Description

NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.