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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 4
  • golgi 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
EpiLoc:plasma membrane
MultiLoc:golgi
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400037693 Potato plasma membrane 96.34 95.17
KRH75378 Soybean plasma membrane 73.47 73.09
VIT_01s0011g03400.t01 Wine grape plasma membrane 72.77 71.53
KRH75379 Soybean plasma membrane 58.29 69.58
AT1G68570.1 Thale cress cytosol, peroxisome, plasma membrane 71.9 69.13
CDY38595 Canola cytosol, peroxisome, plasma membrane 71.38 69.09
Bra004320.1-P Field mustard cytosol, peroxisome, plasma membrane 71.03 68.75
Bra038366.1-P Field mustard plasma membrane 54.28 67.03
Bra038367.1-P Field mustard cytosol, peroxisome, plasma membrane 70.51 66.89
CDY65728 Canola cytosol 23.21 66.83
CDY69402 Canola plasma membrane 34.55 66.44
Bra004030.1-P Field mustard cytosol, peroxisome, plasma membrane 68.76 66.11
GSMUA_Achr5P24480_001 Banana plasma membrane 67.36 66.1
CDY07377 Canola cytosol, peroxisome, plasma membrane 68.59 65.94
CDY54537 Canola cytosol, peroxisome, plasma membrane 69.98 64.89
CDY04237 Canola cytosol, peroxisome, plasma membrane 67.19 64.71
Zm00001d045667_P001 Maize cytosol, nucleus, peroxisome 61.78 59.6
EER88193 Sorghum cytosol, golgi, peroxisome 61.78 59.5
Os06t0264500-01 Rice extracellular 60.56 58.12
TraesCS7B01G113600.2 Wheat cytosol, nucleus, peroxisome 60.73 56.77
TraesCS7D01G209200.1 Wheat cytosol, nucleus, peroxisome 61.08 56.63
HORVU7Hr1G042120.1 Barley cytosol 60.73 56.4
TraesCS7A01G206400.1 Wheat cytosol, nucleus, peroxisome 60.73 56.31
CDX96007 Canola cytosol, peroxisome, plasma membrane 60.73 50.29
Solyc06g005070.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 27.23 49.52
Solyc04g005070.2.1 Tomato plasma membrane 38.74 38.74
Solyc03g113420.2.1 Tomato plasma membrane 39.27 38.33
Solyc12g007220.1.1 Tomato cytosol, peroxisome, plasma membrane 37.87 37.03
Solyc03g113430.2.1 Tomato plasma membrane 37.7 36.92
Solyc06g071570.2.1 Tomato plasma membrane 36.82 36.51
Solyc11g072570.1.1 Tomato plasma membrane 35.43 36.31
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 38.22 36.08
Solyc08g066940.2.1 Tomato plasma membrane 31.94 35.67
Solyc12g044310.1.1 Tomato plasma membrane 39.09 35.61
Solyc05g005990.2.1 Tomato plasma membrane 28.45 35.51
Solyc05g006010.2.1 Tomato plasma membrane 36.13 35.38
Solyc06g075500.2.1 Tomato plasma membrane 33.51 35.36
Solyc05g006000.2.1 Tomato plasma membrane 35.78 34.98
Solyc05g005960.2.1 Tomato plasma membrane 35.08 34.9
Solyc05g005940.2.1 Tomato plasma membrane 35.25 34.89
Solyc05g005950.2.1 Tomato plasma membrane 34.9 34.72
Solyc06g075480.2.1 Tomato plasma membrane 33.51 34.66
Solyc05g005970.2.1 Tomato plasma membrane 34.9 34.48
Solyc03g120560.2.1 Tomato plasma membrane 36.13 34.33
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 18.15 34.32
Solyc05g005920.2.1 Tomato plasma membrane 34.9 34.31
Solyc06g075490.1.1 Tomato plasma membrane 32.81 34.24
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 32.46 34.07
Solyc05g005980.2.1 Tomato plasma membrane 34.21 33.85
Solyc06g075440.1.1 Tomato plasma membrane 31.24 33.71
Solyc11g072560.1.1 Tomato plasma membrane 30.02 33.46
Solyc03g113440.2.1 Tomato plasma membrane 33.86 32.55
Solyc03g120550.2.1 Tomato plasma membrane 36.3 32.5
Solyc11g072580.1.1 Tomato plasma membrane 30.89 32.24
Solyc12g095810.1.1 Tomato plasma membrane 32.81 28.61
Solyc05g005910.2.1 Tomato plasma membrane 35.95 27.28
Protein Annotations
MapMan:11.6.4.1MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0010336GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085GO:GO:0097708InterPro:IPR020846UniProt:K4BXC4
InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF178
SUPFAM:SSF103473EnsemblPlantsGene:Solyc05g009500.2EnsemblPlants:Solyc05g009500.2.1TMHMM:TMhelixUniParc:UPI0002766A72:
Description
No Description!
Coordinates
chr5:-:3668010..3672604
Molecular Weight (calculated)
64544.0 Da
IEP (calculated)
8.427
GRAVY (calculated)
0.266
Length
573 amino acids
Sequence
(BLAST)
001: MEVMNKKENS SRRMKGGMIT MPFIFANEIC EKLAVVGFGT NMVIYLTNEL HLPLTKAANT LTNFGGTASL TPLFGAFIAD TFAGRFWTIT VASIIYQIGM
101: IILTLSAILP QLRPPSCKDD EYCKEANSSQ IAILYVSLLL TAFGSGGIRP CVVAFGADQF DENDPNQKTQ TWKFFNWYYF CMGFSMLVAV TVIVYIQDNI
201: GWGVGFGVPT IAMLISIVVF IFGYPLYRNL DPAGSPFTRL VQVCVAAYKK RKLDMVNDTN LLYQNQELDA DISTAGKLVH TKQMKLLDRA AIVTEEDNPK
301: SPNLWRLNTV HRVEELKSII RMGPIWASGI ILITAYAQQS TFSVQQAKTM NRHLLNSFEI PAASMTVFTL TTMLCTIAFY DRVFVPIARK FTGLERGISF
401: LSRMGIGFFI SVLATLVAGF IEVKRKNVAS TYGLVDKPKS LVPISVFWLV PQYCLHGIAE AFMSIGHLEF FYDQAPESMR STATALFWTS ISAGNYLSTF
501: LVSLVHKFTN WLPDNNLNEG RLEYFYWLIT ILQVVNLIYY VFCARLYTFK PIQMHKTEEL ETRKEGIELV NNV
Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)
001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
Arabidopsis Description
NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.