CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

nucleus 1
plasma membrane 3
golgi 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	golgi
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045667_P001	Maize	cytosol, nucleus, peroxisome	94.45	94.61
Os06t0264500-01	Rice	extracellular	79.83	79.56
TraesCS7D01G209200.1	Wheat	cytosol, nucleus, peroxisome	81.85	78.8
HORVU7Hr1G042120.1	Barley	cytosol	81.51	78.61
TraesCS7B01G113600.2	Wheat	cytosol, nucleus, peroxisome	80.84	78.47
TraesCS7A01G206400.1	Wheat	cytosol, nucleus, peroxisome	81.18	78.16
GSMUA_Achr5P24480_001	Banana	plasma membrane	69.24	70.55
KRH75378	Soybean	plasma membrane	61.68	63.72
VIT_01s0011g03400.t01	Wine grape	plasma membrane	61.68	62.95
KRH75379	Soybean	plasma membrane	49.92	61.88
Solyc05g009500.2.1	Tomato	plasma membrane	59.5	61.78
Bra004320.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.18	61.49
PGSC0003DMT400037693	Potato	plasma membrane	59.83	61.38
CDY38595	Canola	cytosol, peroxisome, plasma membrane	61.01	61.32
AT1G68570.1	Thale cress	cytosol, peroxisome, plasma membrane	61.01	60.91
Bra038366.1-P	Field mustard	plasma membrane	45.88	58.84
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.5	58.61
CDY65728	Canola	cytosol	19.5	58.29
CDY07377	Canola	cytosol, peroxisome, plasma membrane	58.32	58.22
Bra004030.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.15	58.05
CDY69402	Canola	plasma membrane	28.91	57.72
CDY04237	Canola	cytosol, peroxisome, plasma membrane	57.14	57.14
CDY54537	Canola	cytosol, peroxisome, plasma membrane	58.99	56.8
EES19523	Sorghum	plasma membrane	53.95	52.88
EES19524	Sorghum	cytosol, peroxisome, plasma membrane	52.77	52.42
OQU78006	Sorghum	cytosol	50.42	49.92
EES18230	Sorghum	cytosol	51.09	49.59
EER89657	Sorghum	cytosol, peroxisome, plasma membrane	49.24	48.91
EES18229	Sorghum	plastid	50.92	48.02
CDX96007	Canola	cytosol, peroxisome, plasma membrane	50.92	43.79
KXG24141	Sorghum	cytosol, peroxisome, plasma membrane	39.66	39.73
EES16414	Sorghum	cytosol, peroxisome, plasma membrane	39.16	39.03
EER91066	Sorghum	cytosol, peroxisome, plasma membrane	38.49	38.62
EES03650	Sorghum	plasma membrane	35.29	36.08
EES03649	Sorghum	cytosol, peroxisome, plasma membrane	33.95	35.07
EER98133	Sorghum	plasma membrane	37.98	34.72
KXG37624	Sorghum	plasma membrane	34.45	33.88
KXG21716	Sorghum	cytosol, peroxisome, plasma membrane	31.93	32.82
EES13016	Sorghum	cytosol, nucleus, plasma membrane	34.96	32.55
OQU83363	Sorghum	plasma membrane	31.09	32.29
OQU80662	Sorghum	plasma membrane	25.55	29.01

Protein Annotations

Gene3D:1.20.1250.20	MapMan:11.6.4.1	MapMan:24.2.2.9	EntrezGene:8061532	UniProt:C5Z840	EnsemblPlants:EER88193
ProteinID:EER88193	ProteinID:EER88193.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0010336	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:0097708	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF178	EnsemblPlantsGene:SORBI_3010G109200
SUPFAM:SSF103473	unigene:Sbi.14612	TMHMM:TMhelix	UniParc:UPI0001A894CA	RefSeq:XP_002436826.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:10885605..10888176

Molecular Weight (calculated)

64592.3 Da

IEP (calculated)

8.742

GRAVY (calculated)

0.252

Length

595 amino acids

Sequence
(BLAST)

001: MAMEETSKIT GRKKGGLRTM PFIFANEVAE KLAVVGFSTN MLTYLTTQLH MPLAKAATTL TNFGGTSAAT PLIGAFLADA CIGRFWTIAA ASVVYQVGMA
101: LLTVSAALPQ FRPPPCKPGG AVTCQEAAPW QLAVLYVSLL LNAVGAGGYR PCIVAFGADQ FDESRAAERA RSWGFFNWYY FCNGASMLLA VTAVVYVQDN
201: VGWGWGLGVP AFCMGVSVAA FVAGYPMYRR LEPAGSPFTR LAQVVVAAVK KRRLPAADVV PARLYENDDL DAPISMYGKL VHTDQLSFFD RAAIVTDGDM
301: VTQTDADSGK PSAAPVPNPW RLSTVHRVEE LKSVIRMGPI WAAGILVITG SSTQHTFSLQ QASTMDRRLA PGLSTFQIPA GSMTVFALLA MLLTLFLYDR
401: VLVRVARRFT GLDRGISFLH RMGVGFAISV VATLVAGFVE RHRRDAAAAV AGATDAGTSP LSAYWLVPQY ALHGVAEAFT SVGHLEFMYD QAPESMRSTA
501: TALFWLSISL GSYASTLLVD AVHHWSAGPG GANWLPDNIN HGRLDYFYWV VTMLQVMNLI YYAICAKRFR YKPVQLHKKE EEESGKALVE LQEKV

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.