Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU80662 | Sorghum | plasma membrane | 46.95 | 51.34 |
| EES03649 | Sorghum | cytosol, peroxisome, plasma membrane | 39.97 | 39.76 |
| EES03650 | Sorghum | plasma membrane | 35.6 | 35.05 |
| EER88193 | Sorghum | cytosol, golgi, peroxisome | 32.29 | 31.09 |
| EER91066 | Sorghum | cytosol, peroxisome, plasma membrane | 31.41 | 30.35 |
| EES16414 | Sorghum | cytosol, peroxisome, plasma membrane | 31.41 | 30.15 |
| OQU78006 | Sorghum | cytosol | 31.59 | 30.12 |
| EER89657 | Sorghum | cytosol, peroxisome, plasma membrane | 30.89 | 29.55 |
| EES19524 | Sorghum | cytosol, peroxisome, plasma membrane | 30.72 | 29.38 |
| KXG24141 | Sorghum | cytosol, peroxisome, plasma membrane | 30.37 | 29.29 |
| EES18230 | Sorghum | cytosol | 30.89 | 28.87 |
| EES19523 | Sorghum | plasma membrane | 30.02 | 28.34 |
| EER98133 | Sorghum | plasma membrane | 31.94 | 28.11 |
| KXG37624 | Sorghum | plasma membrane | 29.49 | 27.93 |
| EES18229 | Sorghum | plastid | 30.37 | 27.58 |
| EES13016 | Sorghum | cytosol, nucleus, plasma membrane | 29.14 | 26.13 |
| KXG21716 | Sorghum | cytosol, peroxisome, plasma membrane | 25.65 | 25.39 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | UniProt:A0A125QUJ8 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| ProteinID:KXG19068.1 | InterPro:MFS_trans_sf | EnsemblPlants:OQU83363 | ProteinID:OQU83363 | ProteinID:OQU83363.1 | PFAM:PF00854 |
| InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF150 | EnsemblPlantsGene:SORBI_3005G110466 | SUPFAM:SSF103473 | TMHMM:TMhelix |
| UniParc:UPI00076BBEE9 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:28117948..28122414
Molecular Weight (calculated)
61581.6 Da
IEP (calculated)
8.661
GRAVY (calculated)
0.455
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVHEEHQQ AHVFGRKGGM RLVPVIIANE VSERIVSSSV GANLMIYLTT KYHLGAASSA IIIFVYIAAA NFLPVCGAIV SDALLGRSLM VTLTLFSCTI
101: GTTLLCLTSV IARLTPPDCT QPNQACISPT PIQLLVLCAS LGFMALGASG VRPCCLAFAE DQIAHWDTNK KDRALRGLFS WYYASVGFSQ IVAVTVLVYF
201: QDKMGWKVGF MVSAAIMASV TLLNLAASLF YVKVKPQKSM WAGLLKVAVV TIKNRDLVLP EANQGAQFHC LPGSAQLVPS EKMRFLNKAC MVRTRPGNST
301: NNDGHDSTGS RSTCTVEHVE NLKSALSVMP MWSAMVMSFL LQSSSFGVLQ AATMDRRIGS TTFQIPAGSI SIFEILTFTV WSGCYDSCFL PVLRWITGRQ
401: RVLTLKQRMG VGVFLAVASM VVASAVEARR REAAARHGTP PLSVLWLAPQ YALMGLSGAF GAIAQIEFYY AVLPKSMGSF ALALLFFGGG VASIMSTTIV
501: KLVNVVTSKG GGAPWISDDL NQGRYDCYYG LLAVLGAVDL VYLVICANVF HESAQNMTLG AGADGETAQE FRG
101: GTTLLCLTSV IARLTPPDCT QPNQACISPT PIQLLVLCAS LGFMALGASG VRPCCLAFAE DQIAHWDTNK KDRALRGLFS WYYASVGFSQ IVAVTVLVYF
201: QDKMGWKVGF MVSAAIMASV TLLNLAASLF YVKVKPQKSM WAGLLKVAVV TIKNRDLVLP EANQGAQFHC LPGSAQLVPS EKMRFLNKAC MVRTRPGNST
301: NNDGHDSTGS RSTCTVEHVE NLKSALSVMP MWSAMVMSFL LQSSSFGVLQ AATMDRRIGS TTFQIPAGSI SIFEILTFTV WSGCYDSCFL PVLRWITGRQ
401: RVLTLKQRMG VGVFLAVASM VVASAVEARR REAAARHGTP PLSVLWLAPQ YALMGLSGAF GAIAQIEFYY AVLPKSMGSF ALALLFFGGG VASIMSTTIV
501: KLVNVVTSKG GGAPWISDDL NQGRYDCYYG LLAVLGAVDL VYLVICANVF HESAQNMTLG AGADGETAQE FRG
001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
Arabidopsis Description
NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.