CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043374_P001	Maize	plasma membrane	87.8	86.17
Os01t0761500-01	Rice	plasma membrane	76.46	75.42
TraesCS3A01G304400.1	Wheat	plasma membrane	73.2	72.45
TraesCS3B01G332100.1	Wheat	plasma membrane	72.85	72.11
TraesCS3D01G297600.1	Wheat	plasma membrane	72.68	71.94
HORVU3Hr1G073580.1	Barley	plasma membrane	75.43	70.02
GSMUA_Achr9P06310_001	Banana	plasma membrane	53.09	52.91
Solyc12g007220.1.1	Tomato	cytosol, peroxisome, plasma membrane	49.66	49.32
KRH60261	Soybean	plasma membrane	48.28	49.04
PGSC0003DMT400000812	Potato	plasma membrane, plastid	46.22	47.53
KRH41549	Soybean	plasma membrane	45.88	46.11
EES03649	Sorghum	cytosol, peroxisome, plasma membrane	41.24	41.67
EER91066	Sorghum	cytosol, peroxisome, plasma membrane	36.94	36.26
OQU80662	Sorghum	plasma membrane	32.47	36.07
OQU83363	Sorghum	plasma membrane	35.05	35.6
EES16414	Sorghum	cytosol, peroxisome, plasma membrane	36.25	35.34
EER88193	Sorghum	cytosol, golgi, peroxisome	36.08	35.29
KXG24141	Sorghum	cytosol, peroxisome, plasma membrane	35.57	34.85
OQU78006	Sorghum	cytosol	34.54	33.44
EES19523	Sorghum	plasma membrane	34.54	33.11
EES18230	Sorghum	cytosol	34.19	32.46
EES19524	Sorghum	cytosol, peroxisome, plasma membrane	33.16	32.22
EER89657	Sorghum	cytosol, peroxisome, plasma membrane	32.47	31.55
EER98133	Sorghum	plasma membrane	34.71	31.03
EES18229	Sorghum	plastid	33.16	30.59
KXG21716	Sorghum	cytosol, peroxisome, plasma membrane	29.9	30.05
KXG37624	Sorghum	plasma membrane	29.9	28.76
EES13016	Sorghum	cytosol, nucleus, plasma membrane	31.27	28.48

Protein Annotations

MapMan:24.2.2.9	EntrezGene:8079230	UniProt:C5XKU3	EnsemblPlants:EES03650	ProteinID:EES03650	ProteinID:EES03650.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF58	EnsemblPlantsGene:SORBI_3003G304100	SUPFAM:SSF103473
unigene:Sbi.18596	TMHMM:TMhelix	UniParc:UPI0001A84DDB	RefSeq:XP_002458530.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:63445956..63448516

Molecular Weight (calculated)

63204.7 Da

IEP (calculated)

8.700

GRAVY (calculated)

0.396

Length

582 amino acids

Sequence
(BLAST)

001: MEVSAMEDAF PKATARRKGG LRTIPFIISN EIFEKVATFG LTANMILYLI ERYLMSSAVA TEVLYFWNAI SNFLPIFGGV LADVRLGRFR VIALGSCVSL
101: CGMCLLCLTA ILPVYKKTPE CAAGSGCVVL PWQLPLLFTS FALMSLGSGG IRPCTLAFGA DQLDKRDNSA KNVRTLQTFF NWYYTVLGLS IVFAATVIVY
201: IQQARGWVVG FAVPVVLMVT ALTLFLLGSP FYVKEAADRS VIIGFVQVLV ASYKNRREPL PPETADSSSF YNKAGCKPRT PTNKLRYLNR ACVLRNPGKV
301: DGAACDPWRL CTVQQVEDAK AVIRVLPIWS TGIMPGVVVG QQMFPTLQAK TMERRVGKLD IPAASFGVFA ILTLTVWVAV YDRVLVRPLS RLTGHARGLS
401: LRQRMGAGLA LFAVAMAVAA HTESVRRAAA IAQGLLDRGK EKEEPVVHMS AMKLVPQHCL TGLAEGLNLI GQIEFYYSEF PKTMSSIGVS LLALGLGFGA
501: VLGSAIVGVI HAGTAWLPSN LNEGHYDRYY LVLAVLCAAN VVYFVVCGWA YGEEGKNRVV AADAAAAEDD QEEEEEHKAG II

Best Arabidopsis Sequence Match ( AT1G52190.1 )
(BLAST)

001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN

Arabidopsis Description

NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.