Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d031213_P001 Maize plasma membrane 75.93 88.61
EES16414 Sorghum cytosol, peroxisome, plasma membrane 88.38 87.94
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 67.68 66.56
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 68.01 66.01
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 67.68 65.79
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 67.17 65.73
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 67.17 64.98
TraesCS2B01G057700.1 Wheat plasma membrane 65.49 64.94
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 67.34 64.94
TraesCS2A01G045500.1 Wheat plasma membrane 64.98 64.44
TraesCS2D01G044200.1 Wheat plasma membrane 64.81 64.27
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 63.47 64.12
Os12t0638300-01 Rice extracellular, plasma membrane 63.3 64.05
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 66.5 63.92
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 64.98 62.87
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 63.97 62.81
TraesCS2D01G044000.1 Wheat plasma membrane 63.64 62.79
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 65.49 56.71
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 51.52 54.64
EER91066 Sorghum cytosol, peroxisome, plasma membrane 54.04 54.13
GSMUA_Achr5P15030_001 Banana cytosol 43.1 54.01
VIT_14s0066g02590.t01 Wine grape plasma membrane 49.83 50.6
PGSC0003DMT400065197 Potato mitochondrion 49.83 50.6
Solyc03g113430.2.1 Tomato plasma membrane 49.49 50.26
Solyc03g113420.2.1 Tomato plasma membrane 48.99 49.57
PGSC0003DMT400065196 Potato plasma membrane 48.65 48.9
Solyc06g071570.2.1 Tomato plasma membrane 46.8 48.1
PGSC0003DMT400069660 Potato plasma membrane 46.63 47.92
KRH56970 Soybean cytosol, peroxisome, plasma membrane 47.47 47.24
Bra035886.1-P Field mustard plasma membrane 39.23 46.88
KRH03408 Soybean cytosol, peroxisome, plasma membrane 46.63 46.79
KRH56968 Soybean plasma membrane 46.8 46.64
KRH03409 Soybean plasma membrane 47.64 46.24
KRH56969 Soybean plasma membrane 47.47 46.15
CDY26715 Canola plasma membrane 44.95 46.03
EER98133 Sorghum plasma membrane 50.34 45.93
Bra025695.1-P Field mustard plasma membrane 44.78 45.86
CDY45756 Canola plasma membrane 43.94 45.71
CDX83801 Canola cytosol, peroxisome, plasma membrane 45.45 45.69
KRH03412 Soybean plasma membrane 44.95 45.56
AT1G18880.1 Thale cress cytosol, peroxisome, plasma membrane 44.95 45.49
CDY09846 Canola plasma membrane 32.83 45.45
CDX81902 Canola cytosol, peroxisome, plasma membrane 44.95 45.1
Bra031054.1-P Field mustard cytosol, peroxisome, plasma membrane 44.78 44.93
Bra035885.1-P Field mustard peroxisome 42.59 44.86
CDY21692 Canola plasma membrane 43.27 44.77
CDY30731 Canola plasma membrane 45.12 44.74
Bra029248.1-P Field mustard plasma membrane 45.79 44.44
CDY16763 Canola peroxisome 42.93 44.43
CDY45754 Canola plasma membrane 44.95 44.35
CDX84344 Canola plasma membrane 44.78 44.19
CDY00315 Canola plasma membrane 45.45 44.12
Bra010111.1-P Field mustard plasma membrane 45.45 44.12
AT5G62680.1 Thale cress golgi, peroxisome, vacuole 45.62 43.99
CDX87266 Canola peroxisome 42.42 43.98
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 22.05 43.23
CDX96690 Canola plasma membrane 43.94 43.0
Bra019521.1-P Field mustard plasma membrane 43.94 42.72
Bra033782.1-P Field mustard cytosol, peroxisome, plasma membrane 44.11 42.6
CDX68450 Canola cytosol, peroxisome, plasma membrane 44.11 42.6
CDX83027 Canola cytosol, peroxisome, plasma membrane 43.1 42.52
CDY51783 Canola cytosol, peroxisome, plasma membrane 42.93 42.29
Bra018096.1-P Field mustard cytosol, peroxisome, plasma membrane 43.43 41.95
CDY36913 Canola cytosol, peroxisome, plasma membrane 43.43 41.95
CDY21805 Canola cytosol, peroxisome, plasma membrane 43.27 41.38
AT3G47960.1 Thale cress plasma membrane 44.11 41.2
CDY69433 Canola golgi, peroxisome, plastid 43.77 41.01
EER88193 Sorghum cytosol, golgi, peroxisome 39.73 39.66
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 39.06 39.12
EES03650 Sorghum plasma membrane 34.85 35.57
EES19524 Sorghum cytosol, peroxisome, plasma membrane 35.69 35.39
EES03649 Sorghum cytosol, peroxisome, plasma membrane 33.67 34.72
KXG37624 Sorghum plasma membrane 35.19 34.55
EES18230 Sorghum cytosol 35.02 33.93
EER89657 Sorghum cytosol, peroxisome, plasma membrane 34.18 33.89
OQU78006 Sorghum cytosol 34.01 33.61
EES19523 Sorghum plasma membrane 34.01 33.28
EES13016 Sorghum cytosol, nucleus, plasma membrane 35.69 33.18
EES18229 Sorghum plastid 34.51 32.49
OQU80662 Sorghum plasma membrane 27.78 31.49
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 29.63 30.4
OQU83363 Sorghum plasma membrane 29.29 30.37
Bra016534.1-P Field mustard plastid 45.45 26.16
VIT_17s0000g05550.t01 Wine grape plasma membrane 49.33 17.09
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9UniProt:A0A1B6PEL5GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:IPR020846EnsemblPlants:KXG24141ProteinID:KXG24141ProteinID:KXG24141.1InterPro:MFS_domInterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59EnsemblPlantsGene:SORBI_3008G190200SUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI00081AD928SEG:seg:::
Description
hypothetical protein
Coordinates
chr8:-:62415522..62419253
Molecular Weight (calculated)
64766.7 Da
IEP (calculated)
7.998
GRAVY (calculated)
0.247
Length
594 amino acids
Sequence
(BLAST)
001: MHQGRMQLIK AVDDQRPPLE MHDDKASNMK QLSHDDDDDE SSDAGEPAEN YRGWKSMPYV IGNETCEKLG TIGTTANLLV YLTTVYGMTG ANAATLLSLW
101: SGTVNLAPLL GAFLSDSYLG RYTTIALASV ASFLGMIILT LTAAVPSLHP INNGPSSSLQ MAVLLSSFAL LAVGAGGIRP CNLAFGADQF DPRTPAGRRG
201: INSFFNWYYF TFTIAMMISA TVIIYLQSDV NWALGLAVPA TLMGLSCALF FMGTRLYVRV RPEGSPFTSF AQVLVAAARN RRLPAPSPAD LYDPPHRSSL
301: VSKIAYTHQF LCLDKAAVRT DDVDNKPVNP WRLCTLQQVE EVKCLARLLP VWSSGIVYYI VLTNLGNYNV LQAMQTDRHV ARGSSFQIPA GSFVVFNMLA
401: LTLWLPFYDG VLVPAMQRVT KREGGITQLQ RIGVGIVLSI VTMLVAAAVE RHRRRVGDAT SCFLLVPQQM LAGLSEAFAV IGQVDFYYKQ FPENMRSVAG
501: ALLFLGFAIA SYASGLMVTV VHHTTGGSDG RPDWLAQDLN KGRVDLFYLL IAAMAAVNLV YFVVCARWYR FKKPAAAADV ELELEGKAAA PPPV
Best Arabidopsis Sequence Match ( AT5G62680.1 )
(BLAST)
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Arabidopsis Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.