CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
vacuole 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0410500-01	Rice	cytosol, plasma membrane	70.95	73.4
TraesCS1D01G256700.1	Wheat	plasma membrane	70.95	69.9
EES18230	Sorghum	cytosol	71.45	69.82
HORVU1Hr1G063420.2	Barley	cytosol, nucleus, plasma membrane	70.28	69.82
TraesCS1B01G267900.1	Wheat	plasma membrane	70.45	69.52
TraesCS1A01G257400.1	Wheat	plasma membrane	70.62	69.34
EES19523	Sorghum	plasma membrane	69.45	68.53
EES18229	Sorghum	plastid	71.79	68.15
OQU78006	Sorghum	cytosol	64.61	64.39
GSMUA_Achr8P21720_001	Banana	nucleus	61.1	59.42
EES19524	Sorghum	cytosol, peroxisome, plasma membrane	55.93	55.93
VIT_08s0040g00830.t01	Wine grape	peroxisome	54.42	54.42
KRH66698	Soybean	plasma membrane	47.75	53.46
KRH66693	Soybean	mitochondrion	51.59	50.66
KRG95048	Soybean	cytosol, nucleus, plasma membrane	51.42	50.49
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	51.25	49.92
EER88193	Sorghum	cytosol, golgi, peroxisome	48.91	49.24
PGSC0003DMT400065326	Potato	plasma membrane	49.42	48.45
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	25.04	47.62
EER91066	Sorghum	cytosol, peroxisome, plasma membrane	35.56	35.92
EER98133	Sorghum	plasma membrane	38.23	35.18
EES16414	Sorghum	cytosol, peroxisome, plasma membrane	34.39	34.51
KXG24141	Sorghum	cytosol, peroxisome, plasma membrane	33.89	34.18
EES03649	Sorghum	cytosol, peroxisome, plasma membrane	32.72	34.03
KXG37624	Sorghum	plasma membrane	33.56	33.22
KXG21716	Sorghum	cytosol, peroxisome, plasma membrane	31.55	32.64
EES03650	Sorghum	plasma membrane	31.55	32.47
EES13016	Sorghum	cytosol, nucleus, plasma membrane	33.89	31.77
OQU83363	Sorghum	plasma membrane	29.55	30.89
OQU80662	Sorghum	plasma membrane	25.04	28.63

Protein Annotations

MapMan:24.2.2.9	EntrezGene:8076445	UniProt:C5Z964	EnsemblPlants:EER89657	ProteinID:EER89657	ProteinID:EER89657.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF188	EnsemblPlantsGene:SORBI_3010G127800	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0001A89B1E	RefSeq:XP_002438290.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:16383448..16385836

Molecular Weight (calculated)

65321.2 Da

IEP (calculated)

7.968

GRAVY (calculated)

0.227

Length

599 amino acids

Sequence
(BLAST)

001: MATTPTEGDG EQSKWKQGGY KTLPFIMANE ICDRFATAGF NANLITYLTQ QLHMPLVEAS NTLTNFGGTT SLTVVLGAFA ADAFIGRFWS IVAGSLFYQL
101: GMLGLVMSAV VPSLRPAPCP ASTPAACPRA SGGQLAVLYL SMLCACLGTG GIRPSVVAFG ADQFDDDQHG AAAAAAWADR KRRYFNVYFF TMGSAALLAL
201: TLVVYIQDNV GWGWGFGIPA ISMFVSIVVF LVAYPLYVRA KPGGSPFTRL LQVLVAAFRK RNAAVPEDTG MLYQDKELDA LISTKGRLLH TDKLRFLDRA
301: AIVTPGDVSE SGGRPNPWRL STVHRVEELK SIARMLPIWS AGIVLATAGS HNGSFTIMQA RTMERHITGS LEIPPATLSI FTTGTTLVSI ILYDRVFVPV
401: ARCVTGRPSG VTYFQRMGIG LTIAVFGVGA AALVETRRRG VAADHGLLDT PKAVVPMSVF WLVPQYAVHG VADAFASVGQ MEFLYDQAPE SMRSTAVALF
501: WLCGSLGSYL STVLVTVVQR ATRRHGDWLQ DNINRGRIDN YYWLITFIML LNLGHYLCCF YFYTLKPLEV QADDEHKERD DDLHPEQKNN GIMESVNIA

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.