CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038181_P001	Maize	plasma membrane	87.15	87.87
Os05t0410500-01	Rice	cytosol, plasma membrane	75.62	79.27
TraesCS1D01G256700.1	Wheat	plasma membrane	77.43	77.3
TraesCS1B01G267900.1	Wheat	plasma membrane	76.94	76.94
TraesCS1A01G257400.1	Wheat	plasma membrane	76.77	76.39
HORVU1Hr1G063420.2	Barley	cytosol, nucleus, plasma membrane	75.62	76.12
EES18230	Sorghum	cytosol	73.48	72.76
EES18229	Sorghum	plastid	75.29	72.42
EER89657	Sorghum	cytosol, peroxisome, plasma membrane	68.53	69.45
OQU78006	Sorghum	cytosol	64.58	65.22
GSMUA_Achr8P21720_001	Banana	nucleus	62.11	61.2
EES19524	Sorghum	cytosol, peroxisome, plasma membrane	56.18	56.93
VIT_08s0040g00830.t01	Wine grape	peroxisome	56.01	56.76
KRH66698	Soybean	plasma membrane	48.11	54.58
EER88193	Sorghum	cytosol, golgi, peroxisome	52.88	53.95
KRH66693	Soybean	mitochondrion	54.04	53.77
KRG95048	Soybean	cytosol, nucleus, plasma membrane	53.87	53.61
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	52.88	52.2
PGSC0003DMT400065326	Potato	plasma membrane	51.4	51.06
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	25.7	49.52
EES03649	Sorghum	cytosol, peroxisome, plasma membrane	34.27	36.11
EER91066	Sorghum	cytosol, peroxisome, plasma membrane	34.93	35.75
EES16414	Sorghum	cytosol, peroxisome, plasma membrane	34.1	34.67
EES03650	Sorghum	plasma membrane	33.11	34.54
KXG24141	Sorghum	cytosol, peroxisome, plasma membrane	33.28	34.01
EER98133	Sorghum	plasma membrane	36.24	33.79
EES13016	Sorghum	cytosol, nucleus, plasma membrane	35.42	33.65
KXG37624	Sorghum	plasma membrane	33.28	33.39
KXG21716	Sorghum	cytosol, peroxisome, plasma membrane	29.49	30.92
OQU83363	Sorghum	plasma membrane	28.34	30.02
OQU80662	Sorghum	plasma membrane	25.04	29.01

Protein Annotations

MapMan:24.2.2.9	EntrezGene:8085131	UniProt:C5YXU2	ncoils:Coil	EnsemblPlants:EES19523	ProteinID:EES19523
ProteinID:EES19523.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:MFS_trans_sf	PFAM:PF00854
InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF188	EnsemblPlantsGene:SORBI_3009G136700	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI0001A893A1	RefSeq:XP_002441093.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:49293770..49297372

Molecular Weight (calculated)

65520.5 Da

IEP (calculated)

8.751

GRAVY (calculated)

0.296

Length

607 amino acids

Sequence
(BLAST)

001: MGTTTATMDR NNADGGLGRR KKGGFRTMPL ILASEVCDRF ATAGFSANLI TYLTQQLHLP MVEASNTLTN FGGTSAFTPI LGAFAADSFA GRFWTIIAGS
101: VVYQFGMIGV VVSALLPSLR PPPCKPPATP CQRASGWQLA LLYLSLLLTS LGSGGIRPCV VAFGADQFEQ DSSGAAEAAA KAEAERKRRY FNLYFFTMGF
201: AVLLALTVVV YIQENVGWGW GFGIPAIGMF ISIVVFLAGY PLYVLLRPGG SPFTRLAQVV AAAFKKRNAA VPEDPGLLYQ DKELDALIST NGRLLHTNQL
301: TFFDRAAIVT PGDITPSGQP DLWRLSTVHR VEELKSILRL LPIWSAGIML ATAGSHNYTF TIMQARTMDR HLGPGHFQLP PATLTIFSTA AMLVTLAFYD
401: RVFVPLARRV TGLPSGITYF QRMGIGLAIS VLSVASAALV ETKRRDAAAR HGLLDSPAAV VPISVFWLVP QFAVHGIGDA FSSVAHMEFL YDQAPESMRS
501: SAVALFWLAG SIGSYMGTVL VTAVQSATRG AWLQDNINKG RLDYYYWLVT CIMVLNFGYF LVCFYFYTMK PLEVAGDDNG GDHDKECELS SSSLRKNGGG
601: GTGGGMV

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.