CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 3
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038179_P001	Maize	cytosol, nucleus, plasma membrane	42.58	86.14
EES18229	Sorghum	plastid	86.62	84.15
Zm00001d038180_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	42.9	83.76
Os05t0410500-01	Rice	cytosol, plasma membrane	72.76	77.03
HORVU1Hr1G063420.2	Barley	cytosol, nucleus, plasma membrane	73.9	75.12
TraesCS1D01G256700.1	Wheat	plasma membrane	74.23	74.84
TraesCS1A01G257400.1	Wheat	plasma membrane	73.74	74.1
TraesCS1B01G267900.1	Wheat	plasma membrane	73.25	73.97
EES19523	Sorghum	plasma membrane	72.76	73.48
EER89657	Sorghum	cytosol, peroxisome, plasma membrane	69.82	71.45
OQU78006	Sorghum	cytosol	60.03	61.23
GSMUA_Achr8P21720_001	Banana	nucleus	60.52	60.23
EES19524	Sorghum	cytosol, peroxisome, plasma membrane	55.95	57.26
VIT_08s0040g00830.t01	Wine grape	peroxisome	54.81	56.09
KRH66698	Soybean	plasma membrane	46.66	53.46
PGSC0003DMT400065326	Potato	plasma membrane	51.22	51.39
KRG95048	Soybean	cytosol, nucleus, plasma membrane	51.06	51.31
KRH66693	Soybean	mitochondrion	50.9	51.15
EER88193	Sorghum	cytosol, golgi, peroxisome	49.59	51.09
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	26.1	50.79
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	49.1	48.94
EER91066	Sorghum	cytosol, peroxisome, plasma membrane	34.75	35.92
EES16414	Sorghum	cytosol, peroxisome, plasma membrane	34.91	35.85
KXG24141	Sorghum	cytosol, peroxisome, plasma membrane	33.93	35.02
KXG37624	Sorghum	plasma membrane	33.93	34.38
EES03649	Sorghum	cytosol, peroxisome, plasma membrane	32.14	34.2
EES03650	Sorghum	plasma membrane	32.46	34.19
EES13016	Sorghum	cytosol, nucleus, plasma membrane	35.4	33.96
EER98133	Sorghum	plasma membrane	36.05	33.95
KXG21716	Sorghum	cytosol, peroxisome, plasma membrane	31.97	33.85
OQU83363	Sorghum	plasma membrane	28.87	30.89
OQU80662	Sorghum	plasma membrane	25.29	29.58

Protein Annotations

MapMan:24.2.2.9	EntrezGene:8076954	UniProt:C5YXT9	EnsemblPlants:EES18230	ProteinID:EES18230	ProteinID:EES18230.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF188	EnsemblPlantsGene:SORBI_3009G136600	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0001A88770	RefSeq:XP_002439800.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:49279553..49285260

Molecular Weight (calculated)

66644.1 Da

IEP (calculated)

7.534

GRAVY (calculated)

0.280

Length

613 amino acids

Sequence
(BLAST)

001: MATTTTTVGS KNGEGEQKRR EKGGFKTMPF ILGNDICDKF ASTGFGANFI TYLTDQLHMP MVEASILLTN FGGTSSLTPI LGALAADSFA GRFWTIIVGS
101: VFYQLGMLGL LVSALLPSLR PSPCSAPPSG AGCQRASGLQ LTVLYLSLLC KSVGTGGLRP CVVMFGTDQF DHEPGPGAEQ QQQVVTAEAA EAVAERKRRY
201: FNLYFFAMGV ASLLALTVVV YIQDNVGWGW GFGIPAIAMF VSIVVFLIGY PLYVRLKPGG SPFTRLAQVA AAAFKKRNAV VPEDTGMLYQ DKELDVLIST
301: NGRLLHTNQL TFLDRAAIVT PGDISASGQL DLWRLSTVHR VEELKCIVRL LPIWSAGIML ATVEAHGPFT ILQARTMDRH ITQHFEIPAA TMSIFGTMAF
401: LVSLALYDRA FVPLARRVTG LQSGITYFQR MGIGLAIHIL GVATAALVET RRRHAAADHG LLDKPTAVVP LSVFWLVPQF AVNGVAGAFS SVAQLEFLYD
501: QAPESMRSTA AALFWLSSSI GHYLSTVLVT VVQRTTRAHG NDWLQDNINR GRIDNYYWLV TCLMVLNLGY YLICFQFYTT MKPLEMADEK DDHDAECELC
601: ALQKNGTGAG GAV

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.