Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g005070.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 50.96 | 50.79 |
| Os05t0410500-01 | Rice | cytosol, plasma membrane | 79.94 | 43.35 |
| EES18229 | Sorghum | plastid | 86.31 | 42.95 |
| EES18230 | Sorghum | cytosol | 83.76 | 42.9 |
| Zm00001d038181_P001 | Maize | plasma membrane | 78.98 | 41.2 |
| TraesCS1D01G256700.1 | Wheat | plasma membrane | 77.39 | 39.97 |
| TraesCS1B01G267900.1 | Wheat | plasma membrane | 76.75 | 39.7 |
| TraesCS1A01G257400.1 | Wheat | plasma membrane | 77.07 | 39.67 |
| HORVU1Hr1G063420.2 | Barley | cytosol, nucleus, plasma membrane | 76.11 | 39.64 |
| Zm00001d038185_P001 | Maize | plasma membrane | 64.01 | 38.29 |
| GSMUA_Achr8P21720_001 | Banana | nucleus | 64.33 | 32.79 |
| Zm00001d038186_P002 | Maize | cytosol, peroxisome, plasma membrane | 57.32 | 30.15 |
| KRH66698 | Soybean | plasma membrane | 50.0 | 29.35 |
| VIT_08s0040g00830.t01 | Wine grape | peroxisome | 54.46 | 28.55 |
| Zm00001d045667_P001 | Maize | cytosol, nucleus, peroxisome | 52.23 | 27.61 |
| PGSC0003DMT400065326 | Potato | plasma membrane | 53.18 | 27.33 |
| KRH66693 | Soybean | mitochondrion | 49.68 | 25.57 |
| KRG95048 | Soybean | cytosol, nucleus, plasma membrane | 49.68 | 25.57 |
| KRH66697 | Soybean | cytosol, peroxisome, plasma membrane | 48.09 | 24.55 |
| Zm00001d031213_P001 | Maize | plasma membrane | 33.76 | 20.83 |
| Zm00001d043374_P001 | Maize | plasma membrane | 34.39 | 18.21 |
| Zm00001d050456_P001 | Maize | plasma membrane | 29.62 | 18.2 |
| Zm00001d033528_P003 | Maize | cytosol, peroxisome, plasma membrane | 34.08 | 18.17 |
| Zm00001d013529_P002 | Maize | plasma membrane | 34.08 | 18.1 |
| Zm00001d043375_P001 | Maize | plasma membrane | 35.99 | 17.68 |
| Zm00001d001976_P001 | Maize | plastid | 34.71 | 16.27 |
| Zm00001d038179_P001 | Maize | cytosol, nucleus, plasma membrane | 2.55 | 2.64 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | UniProt:A0A1D6M487 | ProteinID:AQK85944.1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF188 |
| SUPFAM:SSF103473 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000842F952 | EnsemblPlantsGene:Zm00001d038180 | EnsemblPlants:Zm00001d038180_P001 |
| EnsemblPlants:Zm00001d038180_T001 | SEG:seg | : | : | : | : |
Description
Protein NRT1/ PTR FAMILY 3.1
Coordinates
chr6:+:150718378..150719322
Molecular Weight (calculated)
34769.2 Da
IEP (calculated)
6.417
GRAVY (calculated)
0.264
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTVLIYLFL CELRFLDRAA IVTPGDISAS GQPDLWRLST VHRVEELKSI VRMLPIWSAG IMLATAGSHN GTFTILQART MDRHITRHFE IPPATMSIFG
101: TAAMLVSLAL YDRAFVPLAR RVTGLQSGIT YFQRMGIGLA ISILGVASAA LVETKRRDAA ADNGFLDNPD AVVPISVFWL VPQFAIHGVA SAFSSVGHME
201: FLYDQAPESM RSTAAALFWL ASSIGHYLGT VLVTVVQRTT RGRGDWLQDN INRGRIDNYY WLVTCLMVLD LGYYIVCFHF YTMKPLEMAD EQDDHDEECE
301: LSTVPKNGIG AGVV
101: TAAMLVSLAL YDRAFVPLAR RVTGLQSGIT YFQRMGIGLA ISILGVASAA LVETKRRDAA ADNGFLDNPD AVVPISVFWL VPQFAIHGVA SAFSSVGHME
201: FLYDQAPESM RSTAAALFWL ASSIGHYLGT VLVTVVQRTT RGRGDWLQDN INRGRIDNYY WLVTCLMVLD LGYYIVCFHF YTMKPLEMAD EQDDHDEECE
301: LSTVPKNGIG AGVV
001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
Arabidopsis Description
NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.