Factsheet for Zm00001d038179_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18230	Sorghum	cytosol	86.14	42.58
EES18229	Sorghum	plastid	87.13	41.84
Zm00001d038181_P001	Maize	plasma membrane	77.23	38.87
TraesCS1D01G256700.1	Wheat	plasma membrane	77.56	38.65
HORVU1Hr1G063420.2	Barley	cytosol, nucleus, plasma membrane	76.9	38.64
TraesCS1A01G257400.1	Wheat	plasma membrane	77.56	38.52
Os05t0410500-01	Rice	cytosol, plasma membrane	73.27	38.34
TraesCS1B01G267900.1	Wheat	plasma membrane	75.91	37.89
GSMUA_Achr8P21720_001	Banana	nucleus	63.04	31.01
Zm00001d038185_P001	Maize	plasma membrane	51.82	29.9
Zm00001d038186_P002	Maize	cytosol, peroxisome, plasma membrane	57.43	29.15
VIT_08s0040g00830.t01	Wine grape	peroxisome	56.44	28.55
KRH66693	Soybean	mitochondrion	56.44	28.03
Zm00001d045667_P001	Maize	cytosol, nucleus, peroxisome	54.13	27.61
KRG95048	Soybean	cytosol, nucleus, plasma membrane	55.45	27.54
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	54.79	26.99
KRH66698	Soybean	plasma membrane	46.86	26.54
PGSC0003DMT400065326	Potato	plasma membrane	51.49	25.53
Zm00001d033528_P003	Maize	cytosol, peroxisome, plasma membrane	35.31	18.17
Zm00001d013529_P002	Maize	plasma membrane	35.31	18.1
Zm00001d031213_P001	Maize	plasma membrane	28.71	17.09
Zm00001d043374_P001	Maize	plasma membrane	32.34	16.53
Zm00001d043375_P001	Maize	plasma membrane	34.32	16.28
Zm00001d001976_P001	Maize	plastid	33.0	14.93
Zm00001d050456_P001	Maize	plasma membrane	22.11	13.11
Zm00001d038180_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	2.64	2.55
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	0.33	0.32

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	UniProt:A0A1D6M486	ProteinID:AQK85943.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
PANTHER:PTHR11654	PANTHER:PTHR11654:SF188	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI00022193C9	EnsemblPlantsGene:Zm00001d038179
EnsemblPlants:Zm00001d038179_P001	EnsemblPlants:Zm00001d038179_T001	SEG:seg	:	:	:

Description

Protein NRT1/ PTR FAMILY 3.1

Coordinates

chr6:+:150651520..150652753

Molecular Weight (calculated)

32376.2 Da

IEP (calculated)

8.457

GRAVY (calculated)

0.258

Length

303 amino acids

Sequence
(BLAST)

001: MATTTTAGRN NGEGEQKRWR EKGGFKTMPF ILGNDICDRF ATAGFGANMI TYLTQQLHLP LVEASNLLTN FGGTSSLTPI LGALAADSFA GRFGTIVAGS
101: VFYQLGMLGL VVSALLPSLR PAPCPGAPAA CQRASGWQLA ALYLSLLCTS VGSGGLRPCV VAFGTDQFDR EPGEQQVTAE AAGEVAERKR RYFNLYFFTM
201: GVAALLALTV VVYIQDNVGW GWGFGIPAVA MFVSIVVFVV GYPLYVRLKP GGSPFTRLAQ VAAAAFKKRH VAVPEDAGML YQDKELDAFI STNGRLLHTD
301: QLT

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.