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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • cytosol 2
  • vacuole 2
  • mitochondrion 1
  • plasma membrane 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, vacuole
BaCelLo:cytosol
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
 mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG95048 Soybean cytosol, nucleus, plasma membrane 94.59 94.59
KRH66698 Soybean plasma membrane 70.16 80.0
KRH66697 Soybean cytosol, peroxisome, plasma membrane 75.9 75.28
VIT_08s0040g00830.t01 Wine grape peroxisome 68.36 69.62
PGSC0003DMT400065326 Potato plasma membrane 63.44 63.34
Solyc06g005070.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 32.46 62.86
GSMUA_Achr8P21720_001 Banana nucleus 58.03 57.47
KRH75378 Soybean plasma membrane 53.93 57.12
Zm00001d038179_P001 Maize cytosol, nucleus, plasma membrane 28.03 56.44
KRH75379 Soybean plasma membrane 43.93 55.83
Os05t0410500-01 Rice cytosol, plasma membrane 52.79 55.61
HORVU1Hr1G063420.2 Barley cytosol, nucleus, plasma membrane 54.75 55.39
Zm00001d038186_P002 Maize cytosol, peroxisome, plasma membrane 54.1 55.28
TraesCS1D01G256700.1 Wheat plasma membrane 55.08 55.26
TraesCS1D01G257200.1 Wheat cytosol, nucleus, plasma membrane 53.77 55.22
TraesCS1B01G268300.1 Wheat cytosol, nucleus, plasma membrane 53.77 55.22
HORVU1Hr1G063460.2 Barley plasma membrane 53.44 55.16
EES19524 Sorghum cytosol, peroxisome, plasma membrane 54.1 55.09
TraesCS1B01G267900.1 Wheat plasma membrane 54.75 55.02
TraesCS1A01G257900.1 Wheat cytosol, nucleus, plasma membrane 53.44 54.88
TraesCS1A01G257400.1 Wheat plasma membrane 54.75 54.75
Zm00001d038181_P001 Maize plasma membrane 53.77 54.49
EES19523 Sorghum plasma membrane 53.77 54.04
Os05t0410900-02 Rice plasma membrane 52.95 54.01
Zm00001d038185_P001 Maize plasma membrane 46.23 53.71
OQU78006 Sorghum cytosol 52.79 53.58
HORVU1Hr1G063470.10 Barley peroxisome 52.46 53.24
TraesCS1D01G257100.1 Wheat plasma membrane 52.62 53.23
TraesCS1A01G257800.1 Wheat cytosol, peroxisome, plasma membrane 52.62 53.06
EER89657 Sorghum cytosol, peroxisome, plasma membrane 50.66 51.59
Os05t0411100-00 Rice cytosol, nucleus, plasma membrane 51.64 50.97
EES18230 Sorghum cytosol 51.15 50.9
TraesCS1B01G268200.1 Wheat plasma membrane 52.95 50.87
EES18229 Sorghum plastid 52.13 50.4
Zm00001d038180_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 25.57 49.68
Os05t0410800-01 Rice cytosol, extracellular, mitochondrion 16.72 45.95
KRH60261 Soybean plasma membrane 35.9 38.22
KRH74756 Soybean plastid 37.7 37.1
KRH04819 Soybean plasma membrane 34.92 36.92
KRH69380 Soybean plastid 37.54 36.41
KRH03408 Soybean cytosol, peroxisome, plasma membrane 34.59 35.64
KRH62051 Soybean plasma membrane 32.62 35.04
KRH56970 Soybean cytosol, peroxisome, plasma membrane 34.26 35.01
KRH47260 Soybean plasma membrane 34.43 34.65
KRH09893 Soybean cytosol, peroxisome, plasma membrane 34.92 34.58
KRH44331 Soybean cytosol, peroxisome, plasma membrane 34.26 34.43
KRH56968 Soybean plasma membrane 33.61 34.4
KRH41549 Soybean plasma membrane 32.62 34.37
KRH44330 Soybean plasma membrane 32.95 34.24
KRH03409 Soybean plasma membrane 33.93 33.82
KRG99183 Soybean cytosol, peroxisome, plasma membrane, plastid 34.43 33.76
KRH56969 Soybean plasma membrane 33.61 33.55
KRH03412 Soybean plasma membrane 32.13 33.45
KRH47259 Soybean plasma membrane 33.28 33.22
KRH16178 Soybean plasma membrane 31.64 32.99
KRH00056 Soybean cytosol, peroxisome, plasma membrane 30.82 32.3
KRH09892 Soybean cytosol, peroxisome, plasma membrane 31.31 31.78
KRG99182 Soybean plasma membrane 29.67 31.53
KRH56967 Soybean peroxisome 30.33 30.99
KRH22952 Soybean plasma membrane 27.38 30.87
KRH04899 Soybean cytosol, peroxisome, plasma membrane 27.7 30.73
Protein Annotations
EntrezGene:100812695MapMan:24.2.2.9UniProt:A0A0R4J2Z0EMBL:ACUP02002006EnsemblPlantsGene:GLYMA_03G122500GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085InterPro:IPR020846EnsemblPlants:KRH66693ProteinID:KRH66693ProteinID:KRH66693.1
InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF188
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0001890C2DSEG:seg::
Description
hypothetical protein
Coordinates
chr3:-:33543574..33548651
Molecular Weight (calculated)
68102.7 Da
IEP (calculated)
7.553
GRAVY (calculated)
0.078
Length
610 amino acids
Sequence
(BLAST)
001: MEIEKSTKGS AEIGEKEEKK KKQHRRGGIR TLPFILANEV CDRFASAGFH GNLISYLTQE LNMPLVAASN TLTNFGGTSS FTPLIGAIIA DSFAGRFWTI
101: TVASLIYELG LISITVSAIL PQFRPPPCPT QANCQEATSS QLWILYISLL LTSVGSGGIR PCVVPFSADQ IDMTKSGVAS RKWNIFNWYF FSMGFASLSA
201: LTIVVYIQDN MGWGWGLGIP CIAMLISIVA FVLGSPLYKT VKPEGSPLVR LAQVTVAAIK KRKEALPEDP KLLYHNWELD ASISLEGRLL HSDQYKWLDK
301: AAIVTEEEAK DPTTTPKLWK LATVHRVEEL KSIIRMLPIW ASGILLITSS SHLHSFVIQQ ARTMDRHLSP SFQISPASMS IFSVLTMMSG VVLYERLFVP
401: FARRFTGNPS GITCLQRMGI GFIINIIATV IAGLMEMKRK SVAAKYHLLD DPKATIPISV FWLVPQYCLH GVAEIFMSVG HLEFLFEQSP ESMRSSATAL
501: YCITTAIGNY MGTLLVSLVH KYTGKENNWL PDRNLNRGGL DYYYFLVSGI QVVNLVYYFI CAWFYTYKSV EEISEKNKEE DLEQANEHVS SDDKLNDGKE
601: EEKRGLTKDE
Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)
001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
Arabidopsis Description
NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.