CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
vacuole 2
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038186_P002	Maize	cytosol, peroxisome, plasma membrane	94.66	94.97
TraesCS1D01G257200.1	Wheat	cytosol, nucleus, plasma membrane	80.3	80.98
Os05t0410900-02	Rice	plasma membrane	80.8	80.94
TraesCS1A01G257900.1	Wheat	cytosol, nucleus, plasma membrane	80.13	80.81
TraesCS1B01G268300.1	Wheat	cytosol, nucleus, plasma membrane	79.63	80.3
HORVU1Hr1G063470.10	Barley	peroxisome	76.96	76.71
GSMUA_Achr8P21720_001	Banana	nucleus	60.93	59.25
VIT_08s0040g00830.t01	Wine grape	peroxisome	56.76	56.76
EES19523	Sorghum	plasma membrane	56.93	56.18
EES18230	Sorghum	cytosol	57.26	55.95
EER89657	Sorghum	cytosol, peroxisome, plasma membrane	55.93	55.93
OQU78006	Sorghum	cytosol	55.76	55.57
KRH66698	Soybean	plasma membrane	49.58	55.51
EES18229	Sorghum	plastid	57.76	54.83
KRH66693	Soybean	mitochondrion	55.09	54.1
KRG95048	Soybean	cytosol, nucleus, plasma membrane	54.59	53.61
EER88193	Sorghum	cytosol, golgi, peroxisome	52.42	52.77
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	53.26	51.87
PGSC0003DMT400065326	Potato	plasma membrane	51.25	50.25
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	25.71	48.89
EER91066	Sorghum	cytosol, peroxisome, plasma membrane	35.73	36.09
KXG24141	Sorghum	cytosol, peroxisome, plasma membrane	35.39	35.69
EES16414	Sorghum	cytosol, peroxisome, plasma membrane	35.23	35.34
EES03649	Sorghum	cytosol, peroxisome, plasma membrane	32.72	34.03
EER98133	Sorghum	plasma membrane	36.23	33.33
EES03650	Sorghum	plasma membrane	32.22	33.16
KXG37624	Sorghum	plasma membrane	32.72	32.4
EES13016	Sorghum	cytosol, nucleus, plasma membrane	33.89	31.77
OQU83363	Sorghum	plasma membrane	29.38	30.72
KXG21716	Sorghum	cytosol, peroxisome, plasma membrane	29.38	30.4
OQU80662	Sorghum	plasma membrane	23.54	26.91

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	EntrezGene:8076956	UniProt:C5YXU4	EnsemblPlants:EES19524	ProteinID:EES19524
ProteinID:EES19524.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF196	EnsemblPlantsGene:SORBI_3009G136900
SUPFAM:SSF103473	unigene:Sbi.8975	TMHMM:TMhelix	UniParc:UPI0001A893A2	RefSeq:XP_002441094.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:49345040..49351443

Molecular Weight (calculated)

65734.1 Da

IEP (calculated)

9.361

GRAVY (calculated)

0.179

Length

599 amino acids

Sequence
(BLAST)

001: MAEDARGEKK DADLSAAVKM PAKQRGGFRT MPFILANDFC DRLASVGFTT NLISYLTLQL HLPLVQASNI ITNYNGTANL TPLIGGLIAD SFAGRFWTIT
101: FGSIIYQLGM VCLTLSAALP SLHPPPCAKH AADCQRASSY QISVLYLSLL CTSIGTGGTR PCTMAFGADQ LELNDAHSRH KPKWSFFNLY FFAVELAKLA
201: AVTAVVYIQD NVGWGWGIGV PTVAMVAAVI IFVSGYKLYI RMPPGGSPLV RLAQVATAAY KKRNAVVPDP SLLYEDKELD AGISTTGRLL HTDQLKFFDK
301: AAIVTDGDVL PSGQPNLWRL STVHRVEELK SIIRMLPICA AGIILVTSAS HNHSFAIQQA RTMDRDITPH FKIPPASMLI FTNVGMLLTL AFYDRVLVRV
401: LRRFTGRPNG ITHLQRTGVG LTIAMLSNVV AAVVERRRKS VAAASGLLDA PKGATLPMSV FWLVPQYAIH GVANAFMDVG RMEFLYDQAP ESMRSTATAL
501: YWLTFSIGSY LGTLLVTIVH DKTRRSGQWL PDNLNRGKLD NYYWLVVALE VVNLVYFFIC AKYYTFKPLE MVSGEEVELH HHGNGNGTDD AKKQGASFK

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.