Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043375_P001 | Maize | plasma membrane | 90.8 | 81.85 |
| TraesCS3B01G332000.1 | Wheat | plasma membrane | 74.83 | 73.55 |
| TraesCS3D01G297400.1 | Wheat | plasma membrane | 74.31 | 73.29 |
| TraesCS3A01G304500.1 | Wheat | cytosol, peroxisome, plasma membrane | 73.78 | 72.9 |
| Os01t0761400-01 | Rice | plasma membrane | 72.05 | 72.3 |
| HORVU3Hr1G073520.3 | Barley | cytosol | 54.69 | 70.95 |
| EES03650 | Sorghum | plasma membrane | 41.67 | 41.24 |
| OQU83363 | Sorghum | plasma membrane | 39.76 | 39.97 |
| OQU80662 | Sorghum | plasma membrane | 35.42 | 38.93 |
| OQU78006 | Sorghum | cytosol | 36.81 | 35.27 |
| EER91066 | Sorghum | cytosol, peroxisome, plasma membrane | 36.11 | 35.08 |
| EES19523 | Sorghum | plasma membrane | 36.11 | 34.27 |
| EER88193 | Sorghum | cytosol, golgi, peroxisome | 35.07 | 33.95 |
| EES16414 | Sorghum | cytosol, peroxisome, plasma membrane | 35.07 | 33.84 |
| KXG24141 | Sorghum | cytosol, peroxisome, plasma membrane | 34.72 | 33.67 |
| EES19524 | Sorghum | cytosol, peroxisome, plasma membrane | 34.03 | 32.72 |
| EER89657 | Sorghum | cytosol, peroxisome, plasma membrane | 34.03 | 32.72 |
| EES18230 | Sorghum | cytosol | 34.2 | 32.14 |
| EES18229 | Sorghum | plastid | 34.72 | 31.7 |
| EER98133 | Sorghum | plasma membrane | 34.9 | 30.88 |
| KXG37624 | Sorghum | plasma membrane | 31.25 | 29.75 |
| KXG21716 | Sorghum | cytosol, peroxisome, plasma membrane | 28.65 | 28.5 |
| EES13016 | Sorghum | cytosol, nucleus, plasma membrane | 30.73 | 27.7 |
Protein Annotations
| MapMan:24.2.2.9 | EntrezGene:8079229 | UniProt:C5XKU2 | EnsemblPlants:EES03649 | ProteinID:EES03649 | ProteinID:EES03649.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | InterPro:MFS_dom | InterPro:MFS_trans_sf |
| PFAM:PF00854 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF111 | EnsemblPlantsGene:SORBI_3003G304000 | SUPFAM:SSF103473 |
| TMHMM:TMhelix | UniParc:UPI0001A84DDA | RefSeq:XP_002458529.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:-:63425050..63428043
Molecular Weight (calculated)
62575.9 Da
IEP (calculated)
8.679
GRAVY (calculated)
0.199
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MEERSLAFET ESAGEDECFK GNKGGFRALP FIFANEMLEK VAGFGLNTNM ITYLTDKYHL STVTSQTMLF VWGAISNFAP IPGAIVADMY LGRFMAVALG
101: SVACLIGMVF LWLTATVPGA RPPPCNGDQC APPGARHLAW LLAGFAFLSL GAGGVRPCSM AFGADQFSRH PKQRRLRILQ AYFNAYYASI GVAFMVAVTA
201: IVYLQDNVSW NVGFAVPMGL MLLSTVSFFL GSGLYIKEKG KRQMFAGIGA AVGAAIRNRG ARLPDKTVDG VYHHLKDCKL AVPTDKLRFL NKACLLRATK
301: EDAPCNGSDA AASERHGHDG KRPCTVDQVE QLKSAIRVLP IWSSTIFLAL AMNQSFAVKQ ADTMDRRVGA GGFRVPSGSL AVFNMATMSL WSASYDRWVA
401: PALQRYTGNQ RGLTMKQRIG GGLLLATAST AVSAAVEGAR RRLALSGVTI SAFWLVPQFA LVGLAEAFGV IGEIEFFYTE LPKSMASFSM SLLYMAFGVG
501: NLAGALIVKV VQVASMRGGR TGWLVDDLNA GHYDYYYWLL TGYGVANFVY FAWCCWVYGE EGKNVEWEEE GNTEQP
101: SVACLIGMVF LWLTATVPGA RPPPCNGDQC APPGARHLAW LLAGFAFLSL GAGGVRPCSM AFGADQFSRH PKQRRLRILQ AYFNAYYASI GVAFMVAVTA
201: IVYLQDNVSW NVGFAVPMGL MLLSTVSFFL GSGLYIKEKG KRQMFAGIGA AVGAAIRNRG ARLPDKTVDG VYHHLKDCKL AVPTDKLRFL NKACLLRATK
301: EDAPCNGSDA AASERHGHDG KRPCTVDQVE QLKSAIRVLP IWSSTIFLAL AMNQSFAVKQ ADTMDRRVGA GGFRVPSGSL AVFNMATMSL WSASYDRWVA
401: PALQRYTGNQ RGLTMKQRIG GGLLLATAST AVSAAVEGAR RRLALSGVTI SAFWLVPQFA LVGLAEAFGV IGEIEFFYTE LPKSMASFSM SLLYMAFGVG
501: NLAGALIVKV VQVASMRGGR TGWLVDDLNA GHYDYYYWLL TGYGVANFVY FAWCCWVYGE EGKNVEWEEE GNTEQP
001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
Arabidopsis Description
NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.