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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane, vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER91066 Sorghum cytosol, peroxisome, plasma membrane 51.46 56.49
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 47.77 55.54
GSMUA_Achr5P15030_001 Banana cytosol 40.4 55.49
VIT_14s0066g02590.t01 Wine grape plasma membrane 48.69 54.19
PGSC0003DMT400069660 Potato plasma membrane 46.54 52.42
Solyc03g113430.2.1 Tomato plasma membrane 47.0 52.31
Solyc06g071570.2.1 Tomato plasma membrane 46.39 52.25
PGSC0003DMT400065197 Potato mitochondrion 46.7 51.97
Solyc03g113420.2.1 Tomato plasma membrane 46.39 51.45
PGSC0003DMT400065196 Potato plasma membrane 46.39 51.1
EES16414 Sorghum cytosol, peroxisome, plasma membrane 46.54 50.75
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 45.93 50.34
KRH03408 Soybean cytosol, peroxisome, plasma membrane 45.47 50.0
KRH56970 Soybean cytosol, peroxisome, plasma membrane 45.16 49.25
Bra035886.1-P Field mustard plasma membrane 37.33 48.89
CDY45756 Canola plasma membrane 42.86 48.86
KRH56968 Soybean plasma membrane 44.39 48.49
CDY30731 Canola plasma membrane 44.24 48.08
CDY00315 Canola plasma membrane 45.16 48.04
Bra010111.1-P Field mustard plasma membrane 45.01 47.88
CDX84344 Canola plasma membrane 44.24 47.84
Bra035885.1-P Field mustard peroxisome 41.32 47.7
CDY45754 Canola plasma membrane 43.93 47.51
KRH03412 Soybean plasma membrane 42.7 47.44
Bra029248.1-P Field mustard plasma membrane 44.55 47.39
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 21.97 47.19
KRH56969 Soybean plasma membrane 44.24 47.14
KRH03409 Soybean plasma membrane 44.09 46.9
CDY16763 Canola peroxisome 41.32 46.86
CDX87266 Canola peroxisome 41.17 46.77
AT5G62680.1 Thale cress golgi, peroxisome, vacuole 44.24 46.75
CDY09846 Canola plasma membrane 30.72 46.62
AT1G18880.1 Thale cress cytosol, peroxisome, plasma membrane 41.78 46.34
CDY26715 Canola plasma membrane 41.17 46.21
Bra025695.1-P Field mustard plasma membrane 41.17 46.21
CDY51783 Canola cytosol, peroxisome, plasma membrane 42.55 45.94
CDX83801 Canola cytosol, peroxisome, plasma membrane 41.63 45.85
Bra019521.1-P Field mustard plasma membrane 42.86 45.66
Bra018096.1-P Field mustard cytosol, peroxisome, plasma membrane 43.01 45.53
CDY36913 Canola cytosol, peroxisome, plasma membrane 43.01 45.53
CDY21692 Canola plasma membrane 39.94 45.3
CDX81902 Canola cytosol, peroxisome, plasma membrane 41.17 45.27
Bra031054.1-P Field mustard cytosol, peroxisome, plasma membrane 41.01 45.1
Bra033782.1-P Field mustard cytosol, peroxisome, plasma membrane 42.55 45.04
CDX68450 Canola cytosol, peroxisome, plasma membrane 42.55 45.04
CDX83027 Canola cytosol, peroxisome, plasma membrane 41.32 44.68
AT3G47960.1 Thale cress plasma membrane 43.32 44.34
CDY21805 Canola cytosol, peroxisome, plasma membrane 41.94 43.96
CDY69433 Canola golgi, peroxisome, plastid 42.7 43.85
CDX96690 Canola plasma membrane 40.55 43.49
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 36.1 39.63
EER89657 Sorghum cytosol, peroxisome, plasma membrane 35.18 38.23
EER88193 Sorghum cytosol, golgi, peroxisome 34.72 37.98
KXG37624 Sorghum plasma membrane 35.18 37.85
OQU78006 Sorghum cytosol 34.72 37.6
EES13016 Sorghum cytosol, nucleus, plasma membrane 35.79 36.46
EES19523 Sorghum plasma membrane 33.79 36.24
EES19524 Sorghum cytosol, peroxisome, plasma membrane 33.33 36.23
EES18230 Sorghum cytosol 33.95 36.05
EES18229 Sorghum plastid 33.95 35.02
EES03649 Sorghum cytosol, peroxisome, plasma membrane 30.88 34.9
EES03650 Sorghum plasma membrane 31.03 34.71
OQU83363 Sorghum plasma membrane 28.11 31.94
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 28.11 31.61
OQU80662 Sorghum plasma membrane 24.88 30.92
Bra016534.1-P Field mustard plastid 41.47 26.16
VIT_17s0000g05550.t01 Wine grape plasma membrane 47.93 18.2
Protein Annotations
MapMan:24.2.2.9EntrezGene:8063655UniProt:C5XBX9EnsemblPlants:EER98133ProteinID:EER98133ProteinID:EER98133.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_fam
PANTHER:PTHR11654PANTHER:PTHR11654:SF117EnsemblPlantsGene:SORBI_3002G064800SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0001A83C3C
RefSeq:XP_002461612.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:-:6394541..6396707
Molecular Weight (calculated)
70010.7 Da
IEP (calculated)
7.678
GRAVY (calculated)
0.313
Length
651 amino acids
Sequence
(BLAST)
001: MARPSVPGTG EHPAAPAGGD TILAVVHDDG TGHHDSLDAA GREVRYRGWK AMPFVIGNET FEKLGSIGTA ANLMVYLTSV FHMTNLRAAV ALNVFGGTTN
101: LATVFGAFAS DLCLGRYATV GFGCVATLIG MIILTLTAGV PALHPPPCSA VAGGQQCAGA TKGQLAVLAL SFLFIVVGAG GIRPCSLPFG ADQFDPNTES
201: GRRGINSFFN WYYFTLTIAV VGSSTGIIYV QSNVSWCIGF AIPTALMFAS CVLFFAGAGL YVRVRPEGGI PLASVFRVAV AAARKRRAPA PQDPAASLFR
301: TRHASSLVSR LPYTDQFRFL DKAAVVESDS EVVDDSSGGG GGKPRDPWRL CSLQQVEEAK CVLRIMPVWA TCIVYYVAFA QTNTYVVLQA AQSDRRLGPG
401: GFEAPPASFT IFPMLALAVW IPFYDRLVVP WLRGLTGVEG GMTLLQRMGV GMALSVVAMI VAGVVEQRRR ELAVLHQAEA NRDLLSVTLV SPASAFWLVP
501: QLAALGLSEA FNQVSQMEFY YKQFPENMRS VAGSLIFTGL AMSMYLSGLL VVVVHRATAD PVLGDDGWLA ENLNRGKLDW FYFLIAFIGA VNFFVFLACA
601: KWYRYKGLDD GGRGGADDDG VHVHVHQWQP TTVQVVDDCP EEGRVVRRRS F
Best Arabidopsis Sequence Match ( AT5G62680.1 )
(BLAST)
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Arabidopsis Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.