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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83027 Canola cytosol, peroxisome, plasma membrane 95.61 97.67
CDY36913 Canola cytosol, peroxisome, plasma membrane 86.99 86.99
CDY51783 Canola cytosol, peroxisome, plasma membrane 85.04 86.73
CDY69433 Canola golgi, peroxisome, plastid 85.85 83.28
CDY21805 Canola cytosol, peroxisome, plasma membrane 84.06 83.25
AT3G47960.1 Thale cress plasma membrane 81.14 78.46
CDX84344 Canola plasma membrane 75.94 77.57
CDY00315 Canola plasma membrane 76.91 77.29
CDY45754 Canola plasma membrane 75.45 77.08
CDY45756 Canola plasma membrane 71.54 77.06
CDY30731 Canola plasma membrane 74.8 76.79
CDX87266 Canola peroxisome 68.94 74.0
CDY16763 Canola peroxisome 68.46 73.34
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 60.49 62.73
CDX83801 Canola cytosol, peroxisome, plasma membrane 59.35 61.76
CDY21692 Canola plasma membrane 57.56 61.67
CDY26715 Canola plasma membrane 57.89 61.38
CDX81902 Canola cytosol, peroxisome, plasma membrane 59.02 61.32
CDY09846 Canola plasma membrane 42.44 60.84
KRH03408 Soybean cytosol, peroxisome, plasma membrane 57.07 59.29
CDX96690 Canola plasma membrane 58.21 58.98
KRH56970 Soybean cytosol, peroxisome, plasma membrane 57.07 58.79
KRH03412 Soybean plasma membrane 54.47 57.17
KRH56968 Soybean plasma membrane 55.12 56.88
Solyc03g113420.2.1 Tomato plasma membrane 53.82 56.39
PGSC0003DMT400065196 Potato plasma membrane 53.98 56.18
KRH56969 Soybean plasma membrane 55.61 55.97
KRH03409 Soybean plasma membrane 55.45 55.72
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 46.67 51.25
GSMUA_Achr4P22320_001 Banana plasma membrane 41.3 50.2
Os12t0638300-01 Rice extracellular, plasma membrane 46.83 49.06
Zm00001d013529_P002 Maize plasma membrane 46.5 48.39
Os03t0687000-02 Rice plasma membrane 46.18 48.38
GSMUA_Achr5P15030_001 Banana cytosol 37.24 48.31
TraesCS4D01G026800.1 Wheat golgi, unclear 46.34 47.82
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 46.18 47.73
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 45.69 47.71
TraesCS4A01G283900.1 Wheat golgi, unclear 46.18 47.57
EER91066 Sorghum cytosol, peroxisome, plasma membrane 45.53 47.22
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 45.85 46.92
Zm00001d031213_P001 Maize plasma membrane 38.54 46.56
TraesCS2A01G045500.1 Wheat plasma membrane 44.55 45.74
TraesCS2D01G044200.1 Wheat plasma membrane 44.55 45.74
TraesCS2B01G057700.1 Wheat plasma membrane 44.23 45.41
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 43.41 45.41
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 44.88 45.17
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 44.55 45.14
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 45.04 45.11
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 44.88 45.1
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 44.06 44.79
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 43.9 44.7
TraesCS2D01G044000.1 Wheat plasma membrane 43.74 44.68
CDY56086 Canola cytosol, peroxisome, plasma membrane 42.93 44.67
CDY53067 Canola cytosol, peroxisome, plasma membrane 42.93 44.44
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 44.55 44.34
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 44.39 44.32
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 42.6 44.11
EES16414 Sorghum cytosol, peroxisome, plasma membrane 42.6 43.89
CDY48389 Canola cytosol, peroxisome, plasma membrane 42.93 43.49
CDY23545 Canola cytosol, peroxisome, plasma membrane 42.28 42.83
CDY11647 Canola plastid 43.09 42.81
CDY38767 Canola plastid 43.09 42.6
EER98133 Sorghum plasma membrane 45.04 42.55
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 42.28 42.35
CDY40280 Canola plasma membrane 38.86 42.08
CDY25813 Canola cytosol, peroxisome, plasma membrane 38.37 41.55
CDY28441 Canola cytosol, peroxisome, plasma membrane 38.05 41.2
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 43.74 39.21
CDY38766 Canola plasma membrane 34.31 38.29
CDY52480 Canola plasma membrane 28.62 38.18
CDY11648 Canola plasma membrane 33.98 37.93
CDX86198 Canola peroxisome 34.63 37.43
CDY05592 Canola plasma membrane 34.47 37.06
CDY52504 Canola plasma membrane 34.47 37.06
CDY38595 Canola cytosol, peroxisome, plasma membrane 33.98 35.3
CDX99152 Canola plasma membrane 31.38 34.65
CDY07377 Canola cytosol, peroxisome, plasma membrane 33.33 34.4
CDY04237 Canola cytosol, peroxisome, plasma membrane 33.01 34.12
CDY20187 Canola plasma membrane 16.1 33.67
CDY54537 Canola cytosol, peroxisome, plasma membrane 33.66 33.5
CDY28371 Canola plasma membrane 26.34 33.33
CDY30141 Canola plasma membrane 32.03 33.22
CDY48147 Canola plasma membrane 29.76 33.21
CDX97728 Canola plasma membrane 31.87 33.05
CDY51257 Canola plastid 26.02 32.92
CDY69519 Canola plasma membrane 15.61 32.88
CDY69522 Canola plasma membrane 15.61 32.88
CDX86030 Canola plasma membrane 14.47 32.72
CDY70561 Canola plasma membrane 28.94 32.72
CDY69402 Canola plasma membrane 15.61 32.21
CDY65728 Canola cytosol 10.24 31.66
CDX86031 Canola plasma membrane 7.97 31.61
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 17.89 31.61
CDY12696 Canola plasma membrane 26.34 31.33
CDY18499 Canola plasma membrane 27.97 30.88
CDX81495 Canola plasma membrane 26.02 30.83
CDX99151 Canola plasma membrane 27.15 30.09
CDY67993 Canola plasma membrane 26.5 29.32
CDX96007 Canola cytosol, peroxisome, plasma membrane 28.78 25.58
CDX69747 Canola plasma membrane 27.48 10.93
CDY68532 Canola cytosol 0.49 0.56
Protein Annotations
MapMan:24.2.2.9GO:A0A078BUM3EnsemblPlants:CDX68450ProteinID:CDX68450ProteinID:CDX68450.1ncoils:Coil
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00125887001InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_fam
PANTHER:PTHR11654PANTHER:PTHR11654:SF59SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EB6647SEG:seg
Description
BnaC01g25280D
Coordinates
chrLK031788:-:1658351..1660971
Molecular Weight (calculated)
68136.0 Da
IEP (calculated)
8.992
GRAVY (calculated)
0.209
Length
615 amino acids
Sequence
(BLAST)
001: MERKPFEVET TEDHKPYSDG GGSDLTSTVD SSGDEQKKLV YRGWKVMPYI IGNETFEKIG IIGTLSNLLV YLTQVFNLKK YTAATIINAF SGTINFGTFF
101: AAFLCDTYFG RYKTLSVAVI ACFLGSVFIL MTAAVPGLHP TPCGTKSSCQ GPNGGQVLFL LLGLALLVVG AGGIRPCNLA FGADQFNPKS ESGKKGINSF
201: FNWYFFTFTF AQIISLTLVV YIQSNVSWTI GLSIPVGLMF LACVIYFAGH NLYVKVKASG SPLAGIARVI AAAIKKRGLK PVKKPCSDLY NHIPPNYANS
301: TLKYSDQFRF LDKAAVMTPD DKLKPDGTAS DPWNLCTMQQ VEEVKCIVRV IPIWFACAVY YLAITLQMTY PVFQALQSDR RLGSDGFKIP GGTYVVFLMS
401: GMTVFIIFYD RVLVPSLRRV TGLDNGITLL QRIGSGIFFA LLSMLISGFV EERRRAIALT KPTLGIEPRA GEISSMSAMW LIPQLVLAGI AEAFAAVGQM
501: EFYYKQFPEN MKSFAGSIFY VGAGVSSYLA SFLISTVHKT TEHSRSGNWL AEDLNKGKLD YFYFMITGLM FVNMGYFLLM AKFYRYKVTN DEANSVIKTY
601: EEETKENQQQ DKSYV
Best Arabidopsis Sequence Match ( AT3G47960.1 )
(BLAST)
001: MKSRVILNHR DRRDKNHNNN NTNHYTQVDT MERKPLEVEP STTTTNTDVV DSFEEEQRKI VYRGWKVMPF IIGNETFEKL GIIGTLSNLL VYLTSVFNLK
101: SYTAATIINA FSGTINFGTF IAAFLCDTYF GRYKTLSVAV IACFLGSFVI LLTAAIPSLH PVACGNKISC EGPSVGQILF LLMGLGFLVV GAGGIRPCNL
201: AFGADQFNPK SESGKKGINS FFNWYFFTFT FAQIISLTAV VYIQSNVSWT IGLIIPVALM FLACVIFFAG DRLYVKVKAS GSPLAGIARV IAAAIKKRGL
301: KPVKQPWVNL YNHIPSNYAN TTLKYTDQFR FLDKAAIMTP EEKLNSDGTA SDPWKLCTLQ QVEEVKCIVR VIPIWFASTI YYLAITIQMT YPVFQALQSD
401: RRLGSGGFRI PAATYVVFLM TGMTVFIIFY DRVLVPSLRR VTGLETGISL LQRIGAGFTF AIMSLLVSGF IEERRRNFAL TKPTLGMAPR TGEISSMSAL
501: WLIPQLTLAG IAEAFAAIGQ MEFYYKQFPE NMKSFAGSIF YVGAGVSSYL ASFLISTVHR TTAHSPSGNW LAEDLNKAKL DYFYFMLTGL MVVNMAYFLL
601: MARWYRYKGG NDEDITEIET NEEETKQQQL QDKNSV
Arabidopsis Description
NPF2.10GTR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6P7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.