Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX99152 Canola plasma membrane 97.43 47.58
AT3G45650.2 Thale cress plasma membrane 86.4 40.24
CDY12696 Canola plasma membrane 62.87 33.08
CDY48147 Canola plasma membrane 66.91 33.03
CDX81495 Canola plasma membrane 61.03 31.98
CDY69402 Canola plasma membrane 33.82 30.87
CDY18499 Canola plasma membrane 61.76 30.16
CDY69519 Canola plasma membrane 32.35 30.14
CDY69522 Canola plasma membrane 32.35 30.14
CDY20187 Canola plasma membrane 31.99 29.59
CDX99151 Canola plasma membrane 60.29 29.55
CDY65728 Canola cytosol 20.96 28.64
TraesCS7B01G020200.1 Wheat peroxisome, plasma membrane, vacuole 39.71 27.84
VIT_06s0004g03520.t01 Wine grape plasma membrane 55.15 26.0
VIT_06s0004g03530.t01 Wine grape plasma membrane 54.41 25.65
Solyc11g072560.1.1 Tomato plasma membrane 48.16 25.49
Solyc06g075500.2.1 Tomato plasma membrane 50.37 25.23
PGSC0003DMT400019426 Potato plasma membrane 50.37 24.77
Solyc06g075490.1.1 Tomato plasma membrane 49.63 24.59
PGSC0003DMT400065310 Potato plasma membrane 50.0 24.5
PGSC0003DMT400016889 Potato plasma membrane 49.63 24.46
Solyc06g075480.2.1 Tomato plasma membrane 49.63 24.37
PGSC0003DMT400019420 Potato plasma membrane 48.9 24.36
KRH22952 Soybean plasma membrane 48.16 24.21
Solyc11g072580.1.1 Tomato plasma membrane 47.79 23.68
Solyc11g072570.1.1 Tomato plasma membrane 48.53 23.61
GSMUA_Achr6P15780_001 Banana plasma membrane 43.01 23.45
GSMUA_Achr10P... Banana plasma membrane 40.81 23.27
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 46.69 23.26
TraesCS7D01G049400.1 Wheat plasma membrane 46.69 22.68
TraesCS4A01G440700.1 Wheat plasma membrane 46.32 22.54
TraesCS7A01G054100.1 Wheat plasma membrane 46.32 22.46
PGSC0003DMT400065303 Potato plasma membrane 42.28 21.86
Solyc06g075440.1.1 Tomato plasma membrane 42.65 21.85
TraesCS5B01G152000.1 Wheat plasma membrane 44.85 21.44
TraesCS7A01G054000.2 Wheat plasma membrane 43.38 21.42
TraesCS7D01G049300.1 Wheat plasma membrane 43.38 21.42
TraesCS4A01G440400.1 Wheat plasma membrane 43.01 21.23
TraesCS4A01G440500.1 Wheat plasma membrane 43.01 21.23
TraesCS4A01G440600.1 Wheat plasma membrane 43.01 21.23
TraesCS4A01G440300.1 Wheat plasma membrane 42.65 21.05
TraesCS5D01G158500.1 Wheat plasma membrane 43.38 20.63
TraesCS5A01G153200.1 Wheat plasma membrane 44.12 20.55
CDY09846 Canola plasma membrane 31.99 20.28
TraesCS7A01G121600.1 Wheat plastid 40.81 20.07
TraesCS7D01G119800.1 Wheat plasma membrane 40.81 19.96
TraesCS7D01G119900.1 Wheat plasma membrane 41.18 19.72
TraesCS7A01G121700.1 Wheat golgi, peroxisome, plasma membrane 40.81 19.51
HORVU5Hr1G047970.5 Barley mitochondrion 43.01 19.47
TraesCS7D01G120200.1 Wheat cytosol, plasma membrane, vacuole 40.44 19.37
HORVU7Hr1G025670.1 Barley plasma membrane 40.07 19.22
PGSC0003DMT400019419 Potato plasma membrane 35.66 19.17
HORVU7Hr1G025680.3 Barley plasma membrane 39.71 18.95
TraesCS7B01G020500.1 Wheat plasma membrane 39.34 18.84
TraesCS7B01G020300.1 Wheat plasma membrane 41.18 18.82
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 39.71 18.65
CDY07377 Canola cytosol, peroxisome, plasma membrane 35.29 16.11
CDY25813 Canola cytosol, peroxisome, plasma membrane 33.46 16.02
CDY38595 Canola cytosol, peroxisome, plasma membrane 34.56 15.88
CDY28441 Canola cytosol, peroxisome, plasma membrane 33.09 15.85
CDY40280 Canola plasma membrane 33.09 15.85
CDY70561 Canola plasma membrane 31.62 15.81
CDY26715 Canola plasma membrane 33.09 15.52
CDY04237 Canola cytosol, peroxisome, plasma membrane 33.82 15.46
CDY54537 Canola cytosol, peroxisome, plasma membrane 34.93 15.37
CDY21805 Canola cytosol, peroxisome, plasma membrane 34.93 15.3
CDY51783 Canola cytosol, peroxisome, plasma membrane 33.82 15.26
CDY30731 Canola plasma membrane 33.46 15.19
CDX84344 Canola plasma membrane 33.46 15.12
CDY38766 Canola plasma membrane 30.51 15.06
CDY23545 Canola cytosol, peroxisome, plasma membrane 33.46 14.99
CDY48389 Canola cytosol, peroxisome, plasma membrane 33.46 14.99
CDY21692 Canola plasma membrane 31.62 14.98
CDY36913 Canola cytosol, peroxisome, plasma membrane 33.82 14.96
CDY45754 Canola plasma membrane 33.09 14.95
CDY45756 Canola plasma membrane 31.25 14.89
CDY11648 Canola plasma membrane 30.15 14.88
CDY00315 Canola plasma membrane 33.46 14.87
CDX87266 Canola peroxisome 31.25 14.83
CDY69433 Canola golgi, peroxisome, plastid 34.56 14.83
CDX86198 Canola peroxisome 30.88 14.76
CDX81902 Canola cytosol, peroxisome, plasma membrane 31.99 14.7
CDY05592 Canola plasma membrane 30.88 14.69
CDY52504 Canola plasma membrane 30.88 14.69
CDX97728 Canola plasma membrane 31.99 14.67
CDY16763 Canola peroxisome 30.88 14.63
CDX83027 Canola cytosol, peroxisome, plasma membrane 32.35 14.62
CDY30141 Canola plasma membrane 31.62 14.5
CDX68450 Canola cytosol, peroxisome, plasma membrane 32.72 14.47
CDX83801 Canola cytosol, peroxisome, plasma membrane 31.25 14.38
CDY56086 Canola cytosol, peroxisome, plasma membrane 31.25 14.38
CDY53067 Canola cytosol, peroxisome, plasma membrane 31.25 14.31
CDX96690 Canola plasma membrane 31.62 14.17
CDY67993 Canola plasma membrane 28.31 13.85
CDY11647 Canola plastid 31.25 13.73
CDY38767 Canola plastid 31.25 13.67
CDY52480 Canola plasma membrane 22.43 13.23
CDY28371 Canola plasma membrane 22.43 12.55
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 26.47 12.14
CDY51257 Canola plastid 21.69 12.14
CDX96007 Canola cytosol, peroxisome, plasma membrane 28.31 11.13
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 13.24 10.34
PGSC0003DMT400019424 Potato mitochondrion 8.09 6.55
CDX69747 Canola plasma membrane 28.31 4.98
CDX86031 Canola plasma membrane 0.0 0.0
CDY68532 Canola cytosol 0.0 0.0
Os05t0338900-00 Rice plasma membrane 0.0 0.0
PGSC0003DMT400019427 Potato endoplasmic reticulum, plasma membrane 0.0 0.0
PGSC0003DMT400056834 Potato endoplasmic reticulum, plasma membrane 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078D9Y1EnsemblPlants:CDX86030ProteinID:CDX86030ProteinID:CDX86030.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00143967001InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_fam
PANTHER:PTHR11654PANTHER:PTHR11654:SF19SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EDE5D1SEG:seg
Description
BnaC03g55450D
Coordinates
chrLK031844:+:363009..364006
Molecular Weight (calculated)
29295.5 Da
IEP (calculated)
8.461
GRAVY (calculated)
0.523
Length
272 amino acids
Sequence
(BLAST)
001: MAGDAETQIS STKRHGGGWI TFPFMIATLL GLTIAAWGWL LNLIVYLIEE FNVKSIAAAQ ITNIFSGCIC MVPAIGAIAA DSFFGTIPVI SVSAFVSLIG
101: VSLLTLTAAL DSLRPNPCDT ASSLCQSPSK SQLGVLYTAI TLASIGTGGT RFTLAAAGAN QYEKTKDQGS FFNWFFFTTY LAGAISVTAI VYSEDNVSWT
201: FGFGLCVAAN FFSFLVFILG RRFYKHDKPL GSPFTSLLRV ILAAVFKRKA VVSTYEKDYH SESLSMPTNS LR
Best Arabidopsis Sequence Match ( AT3G45650.1 )
(BLAST)
001: MASSVTGDAE TAISADSSTK RRGGGWITFP FMIATLLGLT IAAWGWLLNL IVYLIEEFNV KSIAAAQIAN IVSGCICMVP AVAAIASDSF FGTIPVISVS
101: AFISLMGVAL LTLTASLDTL RPRPCETASI LCQSPSKTQL GVLYTAITLA SIGTGGTRFT LATAGANQYE KTKDQGSFFN WFFFTTYLAG AISATAIVYT
201: EDNISWTLGF GLSVAANFFS FLVFVSGKRF YKHDKPLGSP FTSLLCVIFA ALRKRKAVVS TNEKDYHNES ITMPTKSFRF FNRAALKQED EVKPDGTIRN
301: PWRLCSVQQV EDFKAVIRII PLALATIFLS TPIAMQLSLT VLQGLVMDRR LGPSFKIPAG SLQVITLLST CLFIIVNDRV LYPFYQKLTG KHLTPLQRVG
401: IGHAFNILSM AVTAIVEAKR LKIVQKGHFL GSSSVADMSV LWLFPPLVIV GIGEAFHFPG NVALCYQEFP ESMRSTATSI TSVVIGICFY TSTALIDLIQ
501: RTTAWLPDDI NHGRVDNVYW ILVIGGVLNL GYFLVCSWLY RYRNLKDDDH KQAANVSH
Arabidopsis Description
NAXT1Nitrate excretion transporter1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSG9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.