Factsheet for PGSC0003DMT400019424

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
plasma membrane 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400056834	Potato	endoplasmic reticulum, plasma membrane	55.36	89.42
PGSC0003DMT400019427	Potato	endoplasmic reticulum, plasma membrane	51.79	83.25
PGSC0003DMT400016889	Potato	plasma membrane	89.29	54.35
Solyc06g075490.1.1	Tomato	plasma membrane	86.9	53.19
PGSC0003DMT400019426	Potato	plasma membrane	87.2	52.98
CDX86031	Canola	plasma membrane	23.21	50.32
PGSC0003DMT400019420	Potato	plasma membrane	77.98	47.99
Os05t0338900-00	Rice	plasma membrane	27.68	45.37
PGSC0003DMT400065310	Potato	plasma membrane	55.65	33.69
PGSC0003DMT400019419	Potato	plasma membrane	48.81	32.41
VIT_06s0004g03530.t01	Wine grape	plasma membrane	55.06	32.06
KRH22952	Soybean	plasma membrane	51.19	31.79
CDX99152	Canola	plasma membrane	52.38	31.6
VIT_06s0004g03520.t01	Wine grape	plasma membrane	54.17	31.54
CDY48147	Canola	plasma membrane	51.49	31.4
PGSC0003DMT400065303	Potato	plasma membrane	48.81	31.18
AT3G45660.2	Thale cress	plasma membrane	51.79	30.1
AT3G45720.1	Thale cress	plasma membrane	49.7	30.09
AT3G45710.1	Thale cress	plasma membrane	50.0	30.0
Bra033836.1-P	Field mustard	plasma membrane	46.43	29.89
AT3G45650.2	Thale cress	plasma membrane	51.79	29.79
CDY18499	Canola	plasma membrane	49.11	29.62
Bra021295.1-P	Field mustard	plasma membrane	49.11	29.62
AT3G45680.1	Thale cress	plasma membrane	48.81	29.39
AT3G45700.1	Thale cress	plasma membrane	47.62	29.2
Bra033955.1-P	Field mustard	plasma membrane	47.62	29.14
CDX99151	Canola	plasma membrane	47.62	28.83
CDX81495	Canola	plasma membrane	42.26	27.36
AT3G45690.1	Thale cress	plasma membrane	41.96	27.33
CDY12696	Canola	plasma membrane	41.96	27.27
TraesCS7D01G119900.1	Wheat	plasma membrane	45.24	26.76
TraesCS5B01G152000.1	Wheat	plasma membrane	44.94	26.54
TraesCS7D01G119800.1	Wheat	plasma membrane	43.75	26.44
TraesCS4A01G440300.1	Wheat	plasma membrane	42.86	26.13
KXG21716	Sorghum	cytosol, peroxisome, plasma membrane	44.94	26.08
TraesCS7D01G120200.1	Wheat	cytosol, plasma membrane, vacuole	44.05	26.06
TraesCS7B01G020500.1	Wheat	plasma membrane	44.05	26.06
TraesCS7A01G121700.1	Wheat	golgi, peroxisome, plasma membrane	44.05	26.01
HORVU7Hr1G025680.3	Barley	plasma membrane	44.05	25.96
HORVU7Hr1G025670.1	Barley	plasma membrane	43.75	25.93
TraesCS5D01G158500.1	Wheat	plasma membrane	43.75	25.7
TraesCS7A01G054100.1	Wheat	plasma membrane	42.56	25.49
TraesCS4A01G440500.1	Wheat	plasma membrane	41.67	25.41
TraesCS4A01G440700.1	Wheat	plasma membrane	42.26	25.4
TraesCS5A01G153200.1	Wheat	plasma membrane	44.05	25.34
TraesCS7D01G049300.1	Wheat	plasma membrane	41.37	25.23
TraesCS4A01G440400.1	Wheat	plasma membrane	41.37	25.23
TraesCS7D01G049400.1	Wheat	plasma membrane	41.96	25.18
GSMUA_Achr6P15780_001	Banana	plasma membrane	37.2	25.05
TraesCS4A01G440600.1	Wheat	plasma membrane	41.07	25.05
TraesCS7A01G054000.2	Wheat	plasma membrane	41.07	25.05
TraesCS7B01G020300.1	Wheat	plasma membrane	44.35	25.04
GSMUA_Achr10P...	Banana	plasma membrane	35.42	24.95
PGSC0003DMT400010578	Potato	plasma membrane	32.14	24.66
HORVU5Hr1G047970.5	Barley	mitochondrion	43.15	24.13
PGSC0003DMT400006545	Potato	plasma membrane	33.33	23.98
TraesCS7A01G121600.1	Wheat	plastid	38.39	23.33
PGSC0003DMT400000812	Potato	plasma membrane, plastid	36.61	21.73
PGSC0003DMT400065196	Potato	plasma membrane	37.8	21.49
PGSC0003DMT400045466	Potato	cytosol, peroxisome, plasma membrane	36.61	20.3
PGSC0003DMT400074797	Potato	plasma membrane	31.85	20.19
PGSC0003DMT400040284	Potato	plasma membrane	35.12	20.17
PGSC0003DMT400075590	Potato	plasma membrane	34.52	20.14
PGSC0003DMT400069660	Potato	plasma membrane	34.23	19.9
PGSC0003DMT400004850	Potato	plasma membrane	33.93	19.9
PGSC0003DMT400040282	Potato	plasma membrane	34.23	19.86
PGSC0003DMT400065197	Potato	mitochondrion	34.52	19.83
PGSC0003DMT400010582	Potato	plasma membrane	32.44	19.75
PGSC0003DMT400037693	Potato	plasma membrane	33.63	19.48
PGSC0003DMT400040231	Potato	plasma membrane	33.93	19.45
PGSC0003DMT400040285	Potato	plasma membrane	33.63	19.32
PGSC0003DMT400040275	Potato	plasma membrane	32.44	18.29
PGSC0003DMT400065326	Potato	plasma membrane	32.14	17.68
PGSC0003DMT400068025	Potato	plasma membrane	29.76	16.69
PGSC0003DMT400016891	Potato	plasma membrane	23.21	16.35
PGSC0003DMT400065200	Potato	cytosol, peroxisome, plasma membrane	25.3	14.29
Bra038280.1-P	Field mustard	plasma membrane	47.32	14.23
PGSC0003DMT400040277	Potato	cytosol, nucleus, plasma membrane	14.29	12.03
TraesCS7B01G020200.1	Wheat	peroxisome, plasma membrane, vacuole	12.5	10.82
CDX86030	Canola	plasma membrane	6.55	8.09

Protein Annotations

EnsemblPlants:PGSC0003DMT400019424	EnsemblPlantsGene:PGSC0003DMG400007510	Gene3D:1.20.1250.20	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF19	PFAM:PF00854	PGSC:PGSC0003DMG400007510	TMHMM:TMhelix
UniParc:UPI0002962474	UniProt:M1AC23	MapMan:24.2.2.9	:	:	:

Description

Peptide transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400007510]

Coordinates

chr6:-:55995187..55997140

Molecular Weight (calculated)

37090.3 Da

IEP (calculated)

9.567

GRAVY (calculated)

0.344

Length

336 amino acids

Sequence
(BLAST)

001: MGSRFYAKFK PKGSPFTSLA RVIVASITNR QVSLPSTAED FFQGCNVVPK ALAVVPSNTF RFLNRAAIIS EGDVKPDGLT TNRWRLCSVQ EVEDFKPLIK
101: ILPLWSTSFF LGTTIGVQAS LSILQALAMN RYVGPNFQIP AGSILVFVLL STALFLAPFD KFLLPTWKNL TGKSLTPLQR IGTGHVLNFL SMGVSALVES
201: KRLNVAKSNE GSNIVAMSVL WLVPQLVIVG IAEAFHFPGQ VSLYYQEFPI TLKNMATAMI SVLVGISFYL ATALIDVVRK TSTWLPGNIN NGRLDNVYWI
301: LVIGGVVNFG YYVTCAWYYK YQNLNEVDHI DSPSDE

Best Arabidopsis Sequence Match ( AT3G45650.1 )
(BLAST)

001: MASSVTGDAE TAISADSSTK RRGGGWITFP FMIATLLGLT IAAWGWLLNL IVYLIEEFNV KSIAAAQIAN IVSGCICMVP AVAAIASDSF FGTIPVISVS
101: AFISLMGVAL LTLTASLDTL RPRPCETASI LCQSPSKTQL GVLYTAITLA SIGTGGTRFT LATAGANQYE KTKDQGSFFN WFFFTTYLAG AISATAIVYT
201: EDNISWTLGF GLSVAANFFS FLVFVSGKRF YKHDKPLGSP FTSLLCVIFA ALRKRKAVVS TNEKDYHNES ITMPTKSFRF FNRAALKQED EVKPDGTIRN
301: PWRLCSVQQV EDFKAVIRII PLALATIFLS TPIAMQLSLT VLQGLVMDRR LGPSFKIPAG SLQVITLLST CLFIIVNDRV LYPFYQKLTG KHLTPLQRVG
401: IGHAFNILSM AVTAIVEAKR LKIVQKGHFL GSSSVADMSV LWLFPPLVIV GIGEAFHFPG NVALCYQEFP ESMRSTATSI TSVVIGICFY TSTALIDLIQ
501: RTTAWLPDDI NHGRVDNVYW ILVIGGVLNL GYFLVCSWLY RYRNLKDDDH KQAANVSH

Arabidopsis Description

NAXT1Nitrate excretion transporter1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSG9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.