Factsheet for TraesCS4A01G440600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G440500.1	Wheat	plasma membrane	98.0	98.0
TraesCS4A01G440400.1	Wheat	plasma membrane	97.64	97.64
TraesCS7A01G054000.2	Wheat	plasma membrane	96.19	96.19
TraesCS4A01G440300.1	Wheat	plasma membrane	85.48	85.48
TraesCS7A01G054100.1	Wheat	plasma membrane	73.32	72.01
TraesCS4A01G440700.1	Wheat	plasma membrane	72.78	71.74
TraesCS5A01G153200.1	Wheat	plasma membrane	68.24	64.38
GSMUA_Achr6P15780_001	Banana	plasma membrane	43.01	47.49
TraesCS7A01G121700.1	Wheat	golgi, peroxisome, plasma membrane	48.82	47.28
PGSC0003DMT400019427	Potato	endoplasmic reticulum, plasma membrane	17.79	46.89
GSMUA_Achr10P...	Banana	plasma membrane	39.56	45.7
TraesCS7A01G121600.1	Wheat	plastid	45.01	44.85
Solyc06g075500.2.1	Tomato	plasma membrane	43.01	43.65
PGSC0003DMT400016889	Potato	plasma membrane	43.38	43.3
PGSC0003DMT400056834	Potato	endoplasmic reticulum, plasma membrane	16.33	43.27
CDX86030	Canola	plasma membrane	21.23	43.01
PGSC0003DMT400019419	Potato	plasma membrane	39.2	42.69
PGSC0003DMT400019426	Potato	plasma membrane	42.83	42.68
Solyc06g075490.1.1	Tomato	plasma membrane	42.47	42.62
Solyc06g075480.2.1	Tomato	plasma membrane	42.83	42.6
KRH22952	Soybean	plasma membrane	41.74	42.51
Solyc06g075440.1.1	Tomato	plasma membrane	40.83	42.37
CDX99152	Canola	plasma membrane	42.83	42.37
VIT_06s0004g03530.t01	Wine grape	plasma membrane	43.92	41.94
VIT_06s0004g03520.t01	Wine grape	plasma membrane	43.74	41.77
PGSC0003DMT400019420	Potato	plasma membrane	41.38	41.76
PGSC0003DMT400065303	Potato	plasma membrane	39.75	41.63
Solyc11g072570.1.1	Tomato	plasma membrane	41.74	41.14
CDY18499	Canola	plasma membrane	41.56	41.11
Bra021295.1-P	Field mustard	plasma membrane	41.56	41.11
PGSC0003DMT400019424	Potato	mitochondrion	25.05	41.07
Solyc06g075450.1.1	Tomato	extracellular, plasma membrane, vacuole	40.65	41.03
AT3G45700.1	Thale cress	plasma membrane	40.47	40.69
AT3G45680.1	Thale cress	plasma membrane	41.2	40.68
AT3G45650.2	Thale cress	plasma membrane	42.65	40.24
Solyc11g072580.1.1	Tomato	plasma membrane	39.75	39.89
Solyc11g072560.1.1	Tomato	plasma membrane	37.21	39.88
Bra033836.1-P	Field mustard	plasma membrane	37.57	39.66
PGSC0003DMT400065310	Potato	plasma membrane	39.93	39.64
AT3G45660.2	Thale cress	plasma membrane	41.38	39.45
Bra033955.1-P	Field mustard	plasma membrane	38.66	38.8
AT3G45710.1	Thale cress	plasma membrane	39.38	38.75
CDX86031	Canola	plasma membrane	10.89	38.71
CDY48147	Canola	plasma membrane	38.66	38.66
AT3G45690.1	Thale cress	plasma membrane	36.12	38.57
CDY12696	Canola	plasma membrane	36.12	38.49
CDX81495	Canola	plasma membrane	35.93	38.15
AT3G45720.1	Thale cress	plasma membrane	38.29	38.02
CDX99151	Canola	plasma membrane	36.84	36.58
TraesCS7A01G206400.1	Wheat	cytosol, nucleus, peroxisome	35.03	31.23
TraesCS4A01G283900.1	Wheat	golgi, unclear	33.39	30.82
TraesCS2A01G045500.1	Wheat	plasma membrane	33.03	30.38
TraesCS3A01G304500.1	Wheat	cytosol, peroxisome, plasma membrane	32.12	30.36
TraesCS5A01G037900.1	Wheat	cytosol, peroxisome, plasma membrane	33.39	29.87
TraesCS1A01G257900.1	Wheat	cytosol, nucleus, plasma membrane	31.94	29.63
TraesCS5A01G004400.1	Wheat	cytosol, nucleus, plasma membrane	32.67	29.41
TraesCS1A01G257800.1	Wheat	cytosol, peroxisome, plasma membrane	31.58	28.76
TraesCS3A01G304400.1	Wheat	plasma membrane	30.31	28.4
TraesCS1A01G257400.1	Wheat	plasma membrane	31.4	28.36
TraesCS3A01G418800.1	Wheat	plasma membrane	31.22	27.65
TraesCS3A01G418700.1	Wheat	plasma membrane	29.22	26.52
PGSC0003DMT400016891	Potato	plasma membrane	21.96	25.37
Bra038280.1-P	Field mustard	plasma membrane	36.48	17.99

Protein Annotations

EnsemblPlants:TraesCS4A01G440600.1	EnsemblPlantsGene:TraesCS4A01G440600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006857	GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:MFS_trans_sf
InterPro:POT_fam	InterPro:PTR2_symporter_CS	PANTHER:PTHR11654	PANTHER:PTHR11654:SF19	PFAM:PF00854	ScanProsite:PS01022
SEG:seg	SUPFAM:SSF103473	TMHMM:TMhelix	MapMan:24.2.2.9	:	:

Description

No Description!

Coordinates

chr4A:-:709612443..709616324

Molecular Weight (calculated)

58974.5 Da

IEP (calculated)

9.239

GRAVY (calculated)

0.507

Length

551 amino acids

Sequence
(BLAST)

001: MDSSPKPQYL EDQEAQTKTG GKRGGWITLP FIVATMLGLG LAVNGTTSNM LVYLLKEYHV DGVKAAQIAN VVRGSLNLVP IAGAVLSDSY LGCFPVILAG
101: AAINVLAFVL FTLTAALPSL RPPHCTLSSV ECQQGSPGQL FVLYAAICLL AIGAGGTRFN IATMGADQFS STRDKDSFFN WYLVFLYASF MLGDTAIVYI
201: QDSVSWAVGF GVCLATTAFG TIMLLLGVCY YRMPATKASP YTELARVIVA AVRKGSIKVG GAQGSVQYNV GAGAVVDPSG DGAPSKSLRF LNRAAMITTS
301: HKSSVSGDAS AGAWRLCTVQ QVEDLKAVVS VFPLWSSGIL LFMSIGVMIG MIVLQALAMD RSVGPHFSIP AGSVGVSCRV SFILATLVLD RVIFPLWRKI
401: TGGTPPTPLQ RVGIGHVLNV GALVAAALVE RRRLAQPGVP MSVMWLLFPM GIAGVGEALH FPGNMAFYYQ EFPKTLRSLA TAMAPMLVAL GFFSSTMFMD
501: VVTRVTVWLP ENIDHGRLDN VYWTLAAVGT FNFAYFLACD RRYKYHNRAA M

Best Arabidopsis Sequence Match ( AT3G45650.1 )
(BLAST)

001: MASSVTGDAE TAISADSSTK RRGGGWITFP FMIATLLGLT IAAWGWLLNL IVYLIEEFNV KSIAAAQIAN IVSGCICMVP AVAAIASDSF FGTIPVISVS
101: AFISLMGVAL LTLTASLDTL RPRPCETASI LCQSPSKTQL GVLYTAITLA SIGTGGTRFT LATAGANQYE KTKDQGSFFN WFFFTTYLAG AISATAIVYT
201: EDNISWTLGF GLSVAANFFS FLVFVSGKRF YKHDKPLGSP FTSLLCVIFA ALRKRKAVVS TNEKDYHNES ITMPTKSFRF FNRAALKQED EVKPDGTIRN
301: PWRLCSVQQV EDFKAVIRII PLALATIFLS TPIAMQLSLT VLQGLVMDRR LGPSFKIPAG SLQVITLLST CLFIIVNDRV LYPFYQKLTG KHLTPLQRVG
401: IGHAFNILSM AVTAIVEAKR LKIVQKGHFL GSSSVADMSV LWLFPPLVIV GIGEAFHFPG NVALCYQEFP ESMRSTATSI TSVVIGICFY TSTALIDLIQ
501: RTTAWLPDDI NHGRVDNVYW ILVIGGVLNL GYFLVCSWLY RYRNLKDDDH KQAANVSH

Arabidopsis Description

NAXT1Nitrate excretion transporter1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSG9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.