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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 3
  • plasma membrane 4
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:extracellular
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400019419 Potato plasma membrane 89.27 93.68
Solyc11g072570.1.1 Tomato plasma membrane 60.08 57.07
Solyc11g072560.1.1 Tomato plasma membrane 49.91 51.56
Solyc06g075500.2.1 Tomato plasma membrane 51.04 49.91
Solyc06g075480.2.1 Tomato plasma membrane 51.41 49.28
VIT_06s0004g03520.t01 Wine grape plasma membrane 53.3 49.05
VIT_06s0004g03530.t01 Wine grape plasma membrane 52.54 48.35
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 49.72 48.35
Solyc06g075490.1.1 Tomato plasma membrane 48.78 47.18
KRH22952 Soybean plasma membrane 46.33 45.47
AT3G45680.1 Thale cress plasma membrane 47.27 44.98
Solyc11g072580.1.1 Tomato plasma membrane 46.14 44.63
CDY18499 Canola plasma membrane 46.33 44.17
AT3G45700.1 Thale cress plasma membrane 45.57 44.16
Bra021295.1-P Field mustard plasma membrane 46.14 43.99
CDX99152 Canola plasma membrane 46.14 43.99
CDY12696 Canola plasma membrane 42.18 43.33
AT3G45690.1 Thale cress plasma membrane 41.81 43.02
GSMUA_Achr6P15780_001 Banana plasma membrane 40.11 42.69
CDX86030 Canola plasma membrane 21.85 42.65
AT3G45650.2 Thale cress plasma membrane 46.89 42.64
Bra033955.1-P Field mustard plasma membrane 44.07 42.62
CDX81495 Canola plasma membrane 41.43 42.39
Bra033836.1-P Field mustard plasma membrane 41.24 41.95
Os05t0338900-00 Rice plasma membrane 16.2 41.95
AT3G45720.1 Thale cress plasma membrane 43.5 41.62
CDY48147 Canola plasma membrane 42.94 41.38
AT3G45660.2 Thale cress plasma membrane 45.01 41.35
AT3G45710.1 Thale cress plasma membrane 43.5 41.25
TraesCS4A01G440400.1 Wheat plasma membrane 42.75 41.2
TraesCS4A01G440700.1 Wheat plasma membrane 43.13 40.97
TraesCS7D01G049300.1 Wheat plasma membrane 42.37 40.83
TraesCS4A01G440600.1 Wheat plasma membrane 42.37 40.83
TraesCS4A01G440300.1 Wheat plasma membrane 42.37 40.83
CDX86031 Canola plasma membrane 11.86 40.65
TraesCS7A01G054100.1 Wheat plasma membrane 42.94 40.64
TraesCS7A01G054000.2 Wheat plasma membrane 42.0 40.47
TraesCS4A01G440500.1 Wheat plasma membrane 41.81 40.29
CDX99151 Canola plasma membrane 42.0 40.18
TraesCS7D01G049400.1 Wheat plasma membrane 42.37 40.18
GSMUA_Achr10P... Banana plasma membrane 35.97 40.04
TraesCS5D01G158500.1 Wheat plasma membrane 42.94 39.86
TraesCS5B01G152000.1 Wheat plasma membrane 42.56 39.72
TraesCS7D01G120200.1 Wheat cytosol, plasma membrane, vacuole 42.0 39.26
TraesCS7D01G119800.1 Wheat plasma membrane 41.05 39.21
TraesCS7D01G119900.1 Wheat plasma membrane 41.43 38.73
TraesCS7A01G121700.1 Wheat golgi, peroxisome, plasma membrane 41.43 38.66
TraesCS7B01G020500.1 Wheat plasma membrane 41.24 38.56
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 42.0 38.51
TraesCS5A01G153200.1 Wheat plasma membrane 42.18 38.36
HORVU7Hr1G025680.3 Barley plasma membrane 41.05 38.25
HORVU7Hr1G025670.1 Barley plasma membrane 40.49 37.92
HORVU5Hr1G047970.5 Barley mitochondrion 41.81 36.94
TraesCS7B01G020300.1 Wheat plasma membrane 41.05 36.64
TraesCS7A01G121600.1 Wheat plastid 36.53 35.08
TraesCS7B01G020200.1 Wheat peroxisome, plasma membrane, vacuole 23.73 32.47
Solyc06g005070.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 18.64 31.43
Solyc05g009500.2.1 Tomato plasma membrane 33.71 31.24
Solyc03g113430.2.1 Tomato plasma membrane 33.9 30.77
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 17.14 30.03
Solyc03g113420.2.1 Tomato plasma membrane 33.15 29.98
Solyc12g007220.1.1 Tomato cytosol, peroxisome, plasma membrane 32.96 29.86
Solyc04g005070.2.1 Tomato plasma membrane 32.02 29.67
Solyc05g005980.2.1 Tomato plasma membrane 32.2 29.53
Solyc05g005940.2.1 Tomato plasma membrane 32.2 29.53
Solyc06g071570.2.1 Tomato plasma membrane 31.83 29.24
Solyc08g066940.2.1 Tomato plasma membrane 27.87 28.85
Solyc05g005920.2.1 Tomato plasma membrane 31.64 28.82
Solyc05g005950.2.1 Tomato plasma membrane 30.7 28.3
Solyc05g005970.2.1 Tomato plasma membrane 30.89 28.28
Solyc05g005960.2.1 Tomato plasma membrane 30.51 28.12
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 31.83 27.84
Solyc03g120560.2.1 Tomato plasma membrane 31.26 27.53
Solyc05g006010.2.1 Tomato plasma membrane 30.32 27.52
Solyc05g006000.2.1 Tomato plasma membrane 30.13 27.3
Solyc12g044310.1.1 Tomato plasma membrane 32.02 27.03
Solyc03g120550.2.1 Tomato plasma membrane 32.2 26.72
Solyc03g113440.2.1 Tomato plasma membrane 29.0 25.84
Solyc12g095810.1.1 Tomato plasma membrane 31.07 25.11
Solyc05g005990.2.1 Tomato plasma membrane 21.66 25.05
Solyc05g005910.2.1 Tomato plasma membrane 33.9 23.84
Bra038280.1-P Field mustard plasma membrane 41.81 19.87
Protein Annotations
MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006857
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085UniProt:K4C9Q9
InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF19
InterPro:PTR2_symporter_CSSUPFAM:SSF103473EnsemblPlantsGene:Solyc06g075440.1EnsemblPlants:Solyc06g075440.1.1TMHMM:TMhelixUniParc:UPI0002766B74
SEG:seg:::::
Description
No Description!
Coordinates
chr6:-:46819594..46824295
Molecular Weight (calculated)
58426.2 Da
IEP (calculated)
7.789
GRAVY (calculated)
0.402
Length
531 amino acids
Sequence
(BLAST)
001: MAGLSLAAAG WNNNLIVYLI EEFNMNSVSA AKVYNMANGC STIFPVLGAV LADSFLGSFS VIWISSFISL MGVLLLTFTA VMDTLRPPKC FDGSNECGNA
101: STFHLTILYA ALALAYLGNG GTRFTIGSMG ANQFHKPNHQ SIFFNWYTFA LYTSNVIGST VLLYIEDNVS WVIGFAICVA FNIFGLAIFL SGRRFYRHIE
201: AQQESPFMSL ARVAVAAIRK HGEPLSLGGE DYYNGMTKQD SSTNAHDPTN PSKFFRFLNR AALITEGDKK PDRVTAEPWK LCTVQQVEDL KILIKLFPIW
301: TTGLLLCTPL VIQTSLAILQ ALKMDRHLGS NFKIPAGSVI VFTLISTCIT ITFMDRVVSP LLTKHIRISL TPLQRVGIGH VLTVVSMFLS ALVESNRIKL
401: EHQNSVVVPM SVFWLAPQLA ISGVGLAFHS PGYVGFYYQE FPGSLKSTST AVVAVFMGVA FYLGNGVMDL VQRVTGWLPE NINNGRLDNV FWVISVLGAL
501: NFVYYVICAS LYEYKNVDKE VSDSIDKIDG N
Best Arabidopsis Sequence Match ( AT3G45650.1 )
(BLAST)
001: MASSVTGDAE TAISADSSTK RRGGGWITFP FMIATLLGLT IAAWGWLLNL IVYLIEEFNV KSIAAAQIAN IVSGCICMVP AVAAIASDSF FGTIPVISVS
101: AFISLMGVAL LTLTASLDTL RPRPCETASI LCQSPSKTQL GVLYTAITLA SIGTGGTRFT LATAGANQYE KTKDQGSFFN WFFFTTYLAG AISATAIVYT
201: EDNISWTLGF GLSVAANFFS FLVFVSGKRF YKHDKPLGSP FTSLLCVIFA ALRKRKAVVS TNEKDYHNES ITMPTKSFRF FNRAALKQED EVKPDGTIRN
301: PWRLCSVQQV EDFKAVIRII PLALATIFLS TPIAMQLSLT VLQGLVMDRR LGPSFKIPAG SLQVITLLST CLFIIVNDRV LYPFYQKLTG KHLTPLQRVG
401: IGHAFNILSM AVTAIVEAKR LKIVQKGHFL GSSSVADMSV LWLFPPLVIV GIGEAFHFPG NVALCYQEFP ESMRSTATSI TSVVIGICFY TSTALIDLIQ
501: RTTAWLPDDI NHGRVDNVYW ILVIGGVLNL GYFLVCSWLY RYRNLKDDDH KQAANVSH
Arabidopsis Description
NAXT1Nitrate excretion transporter1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSG9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.