Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G121700.1 | Wheat | golgi, peroxisome, plasma membrane | 96.83 | 96.66 |
| TraesCS7B01G020500.1 | Wheat | plasma membrane | 95.77 | 95.77 |
| HORVU7Hr1G025680.3 | Barley | plasma membrane | 91.37 | 91.05 |
| TraesCS7D01G119800.1 | Wheat | plasma membrane | 86.44 | 88.31 |
| TraesCS7D01G119900.1 | Wheat | plasma membrane | 87.5 | 87.5 |
| Os05t0338900-00 | Rice | plasma membrane | 27.11 | 75.12 |
| KXG21716 | Sorghum | cytosol, peroxisome, plasma membrane | 74.82 | 73.4 |
| GSMUA_Achr6P15780_001 | Banana | plasma membrane | 47.01 | 53.51 |
| GSMUA_Achr10P... | Banana | plasma membrane | 44.72 | 53.25 |
| TraesCS5D01G158500.1 | Wheat | plasma membrane | 48.94 | 48.6 |
| TraesCS7D01G049300.1 | Wheat | plasma membrane | 46.65 | 48.09 |
| VIT_06s0004g03530.t01 | Wine grape | plasma membrane | 47.71 | 46.97 |
| VIT_06s0004g03520.t01 | Wine grape | plasma membrane | 47.54 | 46.79 |
| Solyc06g075480.2.1 | Tomato | plasma membrane | 45.6 | 46.75 |
| PGSC0003DMT400016889 | Potato | plasma membrane | 45.07 | 46.38 |
| TraesCS7D01G049400.1 | Wheat | plasma membrane | 45.42 | 46.07 |
| Solyc06g075500.2.1 | Tomato | plasma membrane | 43.66 | 45.67 |
| PGSC0003DMT400019426 | Potato | plasma membrane | 44.37 | 45.57 |
| PGSC0003DMT400019420 | Potato | plasma membrane | 43.49 | 45.24 |
| PGSC0003DMT400056834 | Potato | endoplasmic reticulum, plasma membrane | 16.37 | 44.71 |
| KRH22952 | Soybean | plasma membrane | 42.25 | 44.36 |
| Solyc06g075450.1.1 | Tomato | extracellular, plasma membrane, vacuole | 42.61 | 44.32 |
| PGSC0003DMT400019424 | Potato | mitochondrion | 26.06 | 44.05 |
| PGSC0003DMT400019427 | Potato | endoplasmic reticulum, plasma membrane | 16.2 | 44.02 |
| Solyc06g075490.1.1 | Tomato | plasma membrane | 42.43 | 43.9 |
| AT3G45680.1 | Thale cress | plasma membrane | 42.43 | 43.19 |
| PGSC0003DMT400019419 | Potato | plasma membrane | 38.38 | 43.08 |
| Bra033836.1-P | Field mustard | plasma membrane | 39.44 | 42.91 |
| CDY12696 | Canola | plasma membrane | 38.73 | 42.55 |
| CDX99152 | Canola | plasma membrane | 41.37 | 42.19 |
| Solyc06g075440.1.1 | Tomato | plasma membrane | 39.26 | 42.0 |
| AT3G45700.1 | Thale cress | plasma membrane | 40.49 | 41.97 |
| Bra033955.1-P | Field mustard | plasma membrane | 40.49 | 41.89 |
| Solyc11g072570.1.1 | Tomato | plasma membrane | 41.2 | 41.86 |
| CDX81495 | Canola | plasma membrane | 38.2 | 41.81 |
| CDY18499 | Canola | plasma membrane | 40.67 | 41.47 |
| PGSC0003DMT400065303 | Potato | plasma membrane | 38.38 | 41.44 |
| PGSC0003DMT400065310 | Potato | plasma membrane | 40.49 | 41.44 |
| AT3G45650.2 | Thale cress | plasma membrane | 42.43 | 41.27 |
| AT3G45720.1 | Thale cress | plasma membrane | 40.32 | 41.26 |
| Bra021295.1-P | Field mustard | plasma membrane | 40.32 | 41.11 |
| CDY48147 | Canola | plasma membrane | 39.79 | 41.02 |
| Solyc11g072580.1.1 | Tomato | plasma membrane | 39.44 | 40.8 |
| CDX99151 | Canola | plasma membrane | 39.79 | 40.72 |
| AT3G45690.1 | Thale cress | plasma membrane | 36.97 | 40.7 |
| AT3G45660.2 | Thale cress | plasma membrane | 41.37 | 40.66 |
| CDX86030 | Canola | plasma membrane | 19.37 | 40.44 |
| AT3G45710.1 | Thale cress | plasma membrane | 39.44 | 40.0 |
| Solyc11g072560.1.1 | Tomato | plasma membrane | 36.09 | 39.88 |
| CDX86031 | Canola | plasma membrane | 10.21 | 37.42 |
| TraesCS4D01G026800.1 | Wheat | golgi, unclear | 33.63 | 32.05 |
| TraesCS7D01G209200.1 | Wheat | cytosol, nucleus, peroxisome | 34.51 | 31.72 |
| TraesCS1D01G256700.1 | Wheat | plasma membrane | 33.8 | 31.58 |
| TraesCS1D01G257100.1 | Wheat | plasma membrane | 33.45 | 31.51 |
| TraesCS5D01G012500.1 | Wheat | cytosol, peroxisome, plasma membrane | 33.27 | 30.93 |
| TraesCS1D01G257200.1 | Wheat | cytosol, nucleus, plasma membrane | 32.04 | 30.64 |
| TraesCS5D01G045300.1 | Wheat | cytosol, peroxisome, plasma membrane | 33.1 | 30.62 |
| TraesCS3D01G297600.1 | Wheat | plasma membrane | 31.34 | 30.27 |
| TraesCS2D01G044200.1 | Wheat | plasma membrane | 31.34 | 29.72 |
| TraesCS2D01G044000.1 | Wheat | plasma membrane | 31.34 | 29.57 |
| TraesCS3D01G297400.1 | Wheat | plasma membrane | 30.28 | 29.45 |
| TraesCS3D01G414400.1 | Wheat | plasma membrane | 30.81 | 29.02 |
| TraesCS3D01G414300.1 | Wheat | plasma membrane | 29.58 | 27.68 |
| PGSC0003DMT400016891 | Potato | plasma membrane | 22.54 | 26.83 |
| Bra038280.1-P | Field mustard | plasma membrane | 39.96 | 20.32 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G120200.1 | EnsemblPlantsGene:TraesCS7D01G120200 | Gene3D:1.20.1250.20 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0022857 | GO:GO:0055085 | InterPro:MFS_trans_sf |
| InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF19 | PFAM:PF00854 | SEG:seg | SUPFAM:SSF103473 |
| TMHMM:TMhelix | MapMan:24.2.2.9 | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:74581306..74587653
Molecular Weight (calculated)
60516.8 Da
IEP (calculated)
7.987
GRAVY (calculated)
0.471
Length
568 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANGSQQEE PRRLSSGDHE SLKDPKKRKG GWITFPFLAV AILCLGLASG GAMSNMVVYL ITEYHVPSVD AAQISTIISG SISVAPVAGA IVADAFFGCY
101: PIVAIAMATS VLSLVMFTLT ASLPGLRPAA CQPGAGPCEQ ASTGQMAALY AAVFLLCLGA AGARFNQATM GANQFEAAAD RDVFFNWYFI LLYASSVLGA
201: TVIVYVQDTV SWTLGFGISC AASVVGLAAL LLGARYYRHP AAQGSPFTGL ARVVFAAARK RKVSVVAPGE LKFYHGLRRE DDDGKNGGDD VLPPSDSFSF
301: LNRAAVITDG DVDGASGSAL RPWRVCTVQQ VEDFKTVLRI LPIWSAAIVL SVAIGVQINF TVLQALVMDR AVGPFTVPAG SMIVGTLISV VIFLGLLDRV
401: LLPLWRRVTG HTPTPLQLVG AGQALTVLSM AASALVERER TATVRAHGQE GDPAWVSPLS AMWLVLPFAV AGAGEALHFP AQVTLYYQEF PPSLKNTATG
501: MMAMIVALGF YLSTALVNIV QRATTWLPDN MNASRLENLY WLLTLLVALN FGYFLTCAKL YRYQNIGK
101: PIVAIAMATS VLSLVMFTLT ASLPGLRPAA CQPGAGPCEQ ASTGQMAALY AAVFLLCLGA AGARFNQATM GANQFEAAAD RDVFFNWYFI LLYASSVLGA
201: TVIVYVQDTV SWTLGFGISC AASVVGLAAL LLGARYYRHP AAQGSPFTGL ARVVFAAARK RKVSVVAPGE LKFYHGLRRE DDDGKNGGDD VLPPSDSFSF
301: LNRAAVITDG DVDGASGSAL RPWRVCTVQQ VEDFKTVLRI LPIWSAAIVL SVAIGVQINF TVLQALVMDR AVGPFTVPAG SMIVGTLISV VIFLGLLDRV
401: LLPLWRRVTG HTPTPLQLVG AGQALTVLSM AASALVERER TATVRAHGQE GDPAWVSPLS AMWLVLPFAV AGAGEALHFP AQVTLYYQEF PPSLKNTATG
501: MMAMIVALGF YLSTALVNIV QRATTWLPDN MNASRLENLY WLLTLLVALN FGYFLTCAKL YRYQNIGK
001: MASLVSGDKE AQISGDPGSK RGGWITFPFM LATLLGLSVT SFGWVMNLIV FLIEEFNIKS IAAAQISNVA NGCLSMLPVV AAILADSFFG NIPVIAASSF
101: ISLLGIVLLT LIASLDYLRP RPCEAGSVLC TPPSKLHLGI LYTALALVTT GAGGTRFTMA SAGANQYEKP KEQGSFFNWY FLTLYAGAIT GATAIVYIQD
201: NASWKLGFGL CAAANLISFI VFVSGKRYYK HDKPMGSPFT SLIRVVVSAT VKRKAVISCN EEDYHHYGLE KEVKTSAAMP SKSFRFLNRA ALMTKDDLNQ
301: KEGSVNNIWR LCSVQEVEDF KAILRVFPLW LSIIFVSTPM VMQTSLIVLQ ALVTDRGLGP NFKVPAGSLQ VIIIITACIV IIMNNWLVFP MYKKLTHKLL
401: TPLQKVGIGQ VLTILSMALS AVVEAKRLKT VENGHPMSVL WLFPPLVIVG IGEAFQFPAN IELFYGEFPE SLRNTATSLT SVVIGISFYL STALIDLIQR
501: TTAWLPNDIN HGRVDNVYWL LVIGGILNFG YFLVCSWVYK YRNLKDNDQE QDPKDGTM
101: ISLLGIVLLT LIASLDYLRP RPCEAGSVLC TPPSKLHLGI LYTALALVTT GAGGTRFTMA SAGANQYEKP KEQGSFFNWY FLTLYAGAIT GATAIVYIQD
201: NASWKLGFGL CAAANLISFI VFVSGKRYYK HDKPMGSPFT SLIRVVVSAT VKRKAVISCN EEDYHHYGLE KEVKTSAAMP SKSFRFLNRA ALMTKDDLNQ
301: KEGSVNNIWR LCSVQEVEDF KAILRVFPLW LSIIFVSTPM VMQTSLIVLQ ALVTDRGLGP NFKVPAGSLQ VIIIITACIV IIMNNWLVFP MYKKLTHKLL
401: TPLQKVGIGQ VLTILSMALS AVVEAKRLKT VENGHPMSVL WLFPPLVIVG IGEAFQFPAN IELFYGEFPE SLRNTATSLT SVVIGISFYL STALIDLIQR
501: TTAWLPNDIN HGRVDNVYWL LVIGGILNFG YFLVCSWVYK YRNLKDNDQE QDPKDGTM
Arabidopsis Description
NPF2.3Protein NRT1/ PTR FAMILY 2.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M175]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.