Factsheet for TraesCS1D01G257100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G257800.1	Wheat	cytosol, peroxisome, plasma membrane	96.85	96.53
HORVU1Hr1G063460.2	Barley	plasma membrane	93.03	94.92
TraesCS1B01G268200.1	Wheat	plasma membrane	97.18	92.28
Zm00001d038185_P001	Maize	plasma membrane	70.32	80.76
OQU78006	Sorghum	cytosol	80.27	80.53
Os05t0410800-01	Rice	cytosol, extracellular, mitochondrion	28.03	76.13
TraesCS1D01G256700.1	Wheat	plasma membrane	67.83	67.27
GSMUA_Achr8P21720_001	Banana	nucleus	60.2	58.93
TraesCS1D01G257200.1	Wheat	cytosol, nucleus, plasma membrane	57.05	57.91
KRH66698	Soybean	plasma membrane	48.92	55.14
VIT_08s0040g00830.t01	Wine grape	peroxisome	54.39	54.76
KRG95048	Soybean	cytosol, nucleus, plasma membrane	53.23	52.62
KRH66693	Soybean	mitochondrion	53.23	52.62
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	51.41	50.41
TraesCS7D01G209200.1	Wheat	cytosol, nucleus, peroxisome	50.91	49.68
PGSC0003DMT400065326	Potato	plasma membrane	50.25	49.59
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	24.71	47.3
TraesCS3D01G297400.1	Wheat	plasma membrane	35.16	36.3
TraesCS4D01G026800.1	Wheat	golgi, unclear	34.83	35.23
TraesCS5D01G012500.1	Wheat	cytosol, peroxisome, plasma membrane	35.16	34.7
TraesCS5D01G045300.1	Wheat	cytosol, peroxisome, plasma membrane	35.32	34.69
TraesCS3D01G414400.1	Wheat	plasma membrane	34.0	34.0
TraesCS3D01G297600.1	Wheat	plasma membrane	32.84	33.67
TraesCS2D01G044200.1	Wheat	plasma membrane	33.33	33.56
TraesCS7D01G120200.1	Wheat	cytosol, plasma membrane, vacuole	31.51	33.45
TraesCS2D01G044000.1	Wheat	plasma membrane	33.17	33.22
TraesCS3D01G414300.1	Wheat	plasma membrane	33.33	33.11
TraesCS7D01G119800.1	Wheat	plasma membrane	30.18	32.73
TraesCS5D01G158500.1	Wheat	plasma membrane	30.51	32.17
TraesCS7D01G049300.1	Wheat	plasma membrane	29.02	31.76
TraesCS7D01G049400.1	Wheat	plasma membrane	29.02	31.25
TraesCS7D01G119900.1	Wheat	plasma membrane	29.02	30.81

Protein Annotations

EnsemblPlants:TraesCS1D01G257100.1	EnsemblPlantsGene:TraesCS1D01G257100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF168	PFAM:PF00854	SEG:seg
SUPFAM:SSF103473	TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.9	:	:

Description

No Description!

Coordinates

chr1D:+:349477880..349479882

Molecular Weight (calculated)

65284.0 Da

IEP (calculated)

8.509

GRAVY (calculated)

0.243

Length

603 amino acids

Sequence
(BLAST)

001: MAGAAPADED GSPKKTKQGG FKTMPFILAN EVCDRFATAG FNANMITYLT QQLHLPLVEA SNLLTNFMGT AAFTPVFGAI IADSYAGRFW TIAAGGALYQ
101: LGMLGLVVSA LATALRPPPC AAAALSTPAC QRANGGQLAV LYLSLLFTAL GSGGIRPCVV AFGADQFGVG GRRPGGEQKW SFFNFYFFTM GLAVLLALTV
201: VVYIQENVGW GWGFGIPAIA MFVSVLSFVV GYPLYVRVKP GGSPFVRLVQ VVAAAIKKRK EAMPEDAGML YQNKELDAPI AADGRLLHTN QLRFLDRAAI
301: VTTTDAVDSG DEPDLWRLAT VHRVEELKSI VRMLPLWAAS ITLIAAASHN FTFAIQQSRT MDRRLTPRFE IPPASMIIFT TLTMLVSLSL YDRVFVPLAR
401: RYTSRQAGIS YFQRMGAGLA VSVLGVLAGA LVEGKRRRAA AEHGLLDSPG TTVPISVFWL VPQYALHGVS DALSTVAHME FLYDQSPESM RSSSAALFWV
501: AGSLGNYLGT LLVTVVQSAS GGEWLQDNIN RGRLDYYYWL VTLLMALNLA YYIACFHFYT LKSFDVEGNG AQRRQDDGEG QSRSAERETE LDAGRIGASK
601: NCA

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.