Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 4
- endoplasmic reticulum 2
- vacuole 2
- extracellular 1
- golgi 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d038180_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 50.79 | 50.96 |
PGSC0003DMT400065326 | Potato | plasma membrane | 94.92 | 48.94 |
Os05t0410800-01 | Rice | cytosol, extracellular, mitochondrion | 32.7 | 46.4 |
KRH66698 | Soybean | plasma membrane | 60.95 | 35.89 |
VIT_08s0040g00830.t01 | Wine grape | peroxisome | 64.44 | 33.89 |
KRG95048 | Soybean | cytosol, nucleus, plasma membrane | 63.49 | 32.79 |
KRH66693 | Soybean | mitochondrion | 62.86 | 32.46 |
KRH66697 | Soybean | cytosol, peroxisome, plasma membrane | 59.37 | 30.41 |
Zm00001d038185_P001 | Maize | plasma membrane | 49.21 | 29.52 |
Os05t0410500-01 | Rice | cytosol, plasma membrane | 52.38 | 28.5 |
GSMUA_Achr8P21720_001 | Banana | nucleus | 54.29 | 27.76 |
HORVU1Hr1G063420.2 | Barley | cytosol, nucleus, plasma membrane | 53.02 | 27.69 |
TraesCS1B01G267900.1 | Wheat | plasma membrane | 53.02 | 27.51 |
TraesCS1D01G256700.1 | Wheat | plasma membrane | 53.02 | 27.47 |
Solyc05g009500.2.1 | Tomato | plasma membrane | 49.52 | 27.23 |
TraesCS1A01G257400.1 | Wheat | plasma membrane | 52.7 | 27.21 |
TraesCS1D01G257200.1 | Wheat | cytosol, nucleus, plasma membrane | 49.84 | 26.43 |
TraesCS1B01G268300.1 | Wheat | cytosol, nucleus, plasma membrane | 49.84 | 26.43 |
Zm00001d038181_P001 | Maize | plasma membrane | 50.48 | 26.41 |
TraesCS1A01G257900.1 | Wheat | cytosol, nucleus, plasma membrane | 49.52 | 26.26 |
EES18230 | Sorghum | cytosol | 50.79 | 26.1 |
HORVU1Hr1G063460.2 | Barley | plasma membrane | 48.89 | 26.06 |
EES18229 | Sorghum | plastid | 52.06 | 25.99 |
HORVU1Hr1G063470.10 | Barley | peroxisome | 49.52 | 25.96 |
Os05t0410900-02 | Rice | plasma membrane | 49.21 | 25.92 |
EES19524 | Sorghum | cytosol, peroxisome, plasma membrane | 48.89 | 25.71 |
EES19523 | Sorghum | plasma membrane | 49.52 | 25.7 |
OQU78006 | Sorghum | cytosol | 48.89 | 25.62 |
Os05t0411100-00 | Rice | cytosol, nucleus, plasma membrane | 49.84 | 25.4 |
Zm00001d038186_P002 | Maize | cytosol, peroxisome, plasma membrane | 47.62 | 25.13 |
EER89657 | Sorghum | cytosol, peroxisome, plasma membrane | 47.62 | 25.04 |
TraesCS1A01G257800.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.62 | 24.79 |
TraesCS1D01G257100.1 | Wheat | plasma membrane | 47.3 | 24.71 |
TraesCS1B01G268200.1 | Wheat | plasma membrane | 46.98 | 23.31 |
Solyc06g071090.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 20.0 | 20.79 |
Solyc11g072570.1.1 | Tomato | plasma membrane | 34.29 | 19.32 |
Solyc06g075440.1.1 | Tomato | plasma membrane | 31.43 | 18.64 |
Solyc12g007220.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 34.6 | 18.6 |
Solyc03g113420.2.1 | Tomato | plasma membrane | 33.97 | 18.23 |
Solyc05g006920.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 34.29 | 17.79 |
Solyc06g071570.2.1 | Tomato | plasma membrane | 32.38 | 17.65 |
Solyc03g113430.2.1 | Tomato | plasma membrane | 32.38 | 17.44 |
Solyc06g075450.1.1 | Tomato | extracellular, plasma membrane, vacuole | 30.16 | 17.4 |
Solyc06g075500.2.1 | Tomato | plasma membrane | 29.84 | 17.31 |
Solyc06g075490.1.1 | Tomato | plasma membrane | 28.57 | 16.39 |
Solyc11g072580.1.1 | Tomato | plasma membrane | 28.57 | 16.39 |
Solyc05g005980.2.1 | Tomato | plasma membrane | 29.52 | 16.06 |
Solyc04g005070.2.1 | Tomato | plasma membrane | 29.21 | 16.06 |
Solyc06g075480.2.1 | Tomato | plasma membrane | 27.94 | 15.88 |
Solyc05g005970.2.1 | Tomato | plasma membrane | 28.89 | 15.69 |
Solyc11g072560.1.1 | Tomato | plasma membrane | 25.4 | 15.56 |
Solyc05g006010.2.1 | Tomato | plasma membrane | 28.89 | 15.56 |
Solyc05g006000.2.1 | Tomato | plasma membrane | 28.89 | 15.53 |
Solyc05g005950.2.1 | Tomato | plasma membrane | 28.25 | 15.45 |
Solyc05g005940.2.1 | Tomato | plasma membrane | 27.62 | 15.03 |
Solyc05g005920.2.1 | Tomato | plasma membrane | 27.62 | 14.92 |
Solyc12g044310.1.1 | Tomato | plasma membrane | 29.52 | 14.79 |
Solyc03g113440.2.1 | Tomato | plasma membrane | 27.62 | 14.6 |
Solyc03g120560.2.1 | Tomato | plasma membrane | 27.94 | 14.59 |
Solyc05g005960.2.1 | Tomato | plasma membrane | 26.67 | 14.58 |
Solyc03g120550.2.1 | Tomato | plasma membrane | 27.62 | 13.59 |
Solyc12g095810.1.1 | Tomato | plasma membrane | 28.25 | 13.55 |
Solyc05g005910.2.1 | Tomato | plasma membrane | 30.16 | 12.58 |
Solyc08g066940.2.1 | Tomato | plasma membrane | 20.32 | 12.48 |
Solyc05g005990.2.1 | Tomato | plasma membrane | 14.6 | 10.02 |
Zm00001d038179_P001 | Maize | cytosol, nucleus, plasma membrane | 0.32 | 0.33 |
Protein Annotations
EnsemblPlants:Solyc06g005070.1.1 | EnsemblPlantsGene:Solyc06g005070.1 | Gene3D:1.20.1250.20 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
InterPro:MFS_trans_sf | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF188 | PFAM:PF00854 | SUPFAM:SSF103473 |
TMHMM:TMhelix | UniParc:UPI0002765930 | UniProt:K4C2Z1 | MapMan:24.2.2.9 | : | : |
Description
No Description!
Coordinates
chr6:+:57089..58268
Molecular Weight (calculated)
35535.1 Da
IEP (calculated)
8.375
GRAVY (calculated)
0.012
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQWIDRAAV VTGNDMKETC QPNLWRLATV HRTEELKCIL RMLPIWAAGM LHFASHSHVS SFTIQQARSM DRHLSHSFQI PPASMSIFSV LTVLIGLALY
101: ERFFVPFARR FTGHKSGVTC LQRMGIGFAI NILATATSAL AEIKRKKAAA DHNLLDQPMT HVIPISVFWL VPQYCLHGVA EVFMSVGHLE FLIEQFPESM
201: RSTGAALNSL ASSFGNYLGT FIVTLVHQYT GKERNWLPDR NLNRGRLENF YWLMAGVQVV NFVYYLICAS LYKYKPLEEI IEGCKGTDVE LADETMLVDN
301: SKGDGQTDRA RNGKN
101: ERFFVPFARR FTGHKSGVTC LQRMGIGFAI NILATATSAL AEIKRKKAAA DHNLLDQPMT HVIPISVFWL VPQYCLHGVA EVFMSVGHLE FLIEQFPESM
201: RSTGAALNSL ASSFGNYLGT FIVTLVHQYT GKERNWLPDR NLNRGRLENF YWLMAGVQVV NFVYYLICAS LYKYKPLEEI IEGCKGTDVE LADETMLVDN
301: SKGDGQTDRA RNGKN
001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
Arabidopsis Description
NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.