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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 4
  • endoplasmic reticulum 2
  • vacuole 2
  • extracellular 1
  • golgi 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038180_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 50.79 50.96
PGSC0003DMT400065326 Potato plasma membrane 94.92 48.94
Os05t0410800-01 Rice cytosol, extracellular, mitochondrion 32.7 46.4
KRH66698 Soybean plasma membrane 60.95 35.89
VIT_08s0040g00830.t01 Wine grape peroxisome 64.44 33.89
KRG95048 Soybean cytosol, nucleus, plasma membrane 63.49 32.79
KRH66693 Soybean mitochondrion 62.86 32.46
KRH66697 Soybean cytosol, peroxisome, plasma membrane 59.37 30.41
Zm00001d038185_P001 Maize plasma membrane 49.21 29.52
Os05t0410500-01 Rice cytosol, plasma membrane 52.38 28.5
GSMUA_Achr8P21720_001 Banana nucleus 54.29 27.76
HORVU1Hr1G063420.2 Barley cytosol, nucleus, plasma membrane 53.02 27.69
TraesCS1B01G267900.1 Wheat plasma membrane 53.02 27.51
TraesCS1D01G256700.1 Wheat plasma membrane 53.02 27.47
Solyc05g009500.2.1 Tomato plasma membrane 49.52 27.23
TraesCS1A01G257400.1 Wheat plasma membrane 52.7 27.21
TraesCS1D01G257200.1 Wheat cytosol, nucleus, plasma membrane 49.84 26.43
TraesCS1B01G268300.1 Wheat cytosol, nucleus, plasma membrane 49.84 26.43
Zm00001d038181_P001 Maize plasma membrane 50.48 26.41
TraesCS1A01G257900.1 Wheat cytosol, nucleus, plasma membrane 49.52 26.26
EES18230 Sorghum cytosol 50.79 26.1
HORVU1Hr1G063460.2 Barley plasma membrane 48.89 26.06
EES18229 Sorghum plastid 52.06 25.99
HORVU1Hr1G063470.10 Barley peroxisome 49.52 25.96
Os05t0410900-02 Rice plasma membrane 49.21 25.92
EES19524 Sorghum cytosol, peroxisome, plasma membrane 48.89 25.71
EES19523 Sorghum plasma membrane 49.52 25.7
OQU78006 Sorghum cytosol 48.89 25.62
Os05t0411100-00 Rice cytosol, nucleus, plasma membrane 49.84 25.4
Zm00001d038186_P002 Maize cytosol, peroxisome, plasma membrane 47.62 25.13
EER89657 Sorghum cytosol, peroxisome, plasma membrane 47.62 25.04
TraesCS1A01G257800.1 Wheat cytosol, peroxisome, plasma membrane 47.62 24.79
TraesCS1D01G257100.1 Wheat plasma membrane 47.3 24.71
TraesCS1B01G268200.1 Wheat plasma membrane 46.98 23.31
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 20.0 20.79
Solyc11g072570.1.1 Tomato plasma membrane 34.29 19.32
Solyc06g075440.1.1 Tomato plasma membrane 31.43 18.64
Solyc12g007220.1.1 Tomato cytosol, peroxisome, plasma membrane 34.6 18.6
Solyc03g113420.2.1 Tomato plasma membrane 33.97 18.23
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 34.29 17.79
Solyc06g071570.2.1 Tomato plasma membrane 32.38 17.65
Solyc03g113430.2.1 Tomato plasma membrane 32.38 17.44
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 30.16 17.4
Solyc06g075500.2.1 Tomato plasma membrane 29.84 17.31
Solyc06g075490.1.1 Tomato plasma membrane 28.57 16.39
Solyc11g072580.1.1 Tomato plasma membrane 28.57 16.39
Solyc05g005980.2.1 Tomato plasma membrane 29.52 16.06
Solyc04g005070.2.1 Tomato plasma membrane 29.21 16.06
Solyc06g075480.2.1 Tomato plasma membrane 27.94 15.88
Solyc05g005970.2.1 Tomato plasma membrane 28.89 15.69
Solyc11g072560.1.1 Tomato plasma membrane 25.4 15.56
Solyc05g006010.2.1 Tomato plasma membrane 28.89 15.56
Solyc05g006000.2.1 Tomato plasma membrane 28.89 15.53
Solyc05g005950.2.1 Tomato plasma membrane 28.25 15.45
Solyc05g005940.2.1 Tomato plasma membrane 27.62 15.03
Solyc05g005920.2.1 Tomato plasma membrane 27.62 14.92
Solyc12g044310.1.1 Tomato plasma membrane 29.52 14.79
Solyc03g113440.2.1 Tomato plasma membrane 27.62 14.6
Solyc03g120560.2.1 Tomato plasma membrane 27.94 14.59
Solyc05g005960.2.1 Tomato plasma membrane 26.67 14.58
Solyc03g120550.2.1 Tomato plasma membrane 27.62 13.59
Solyc12g095810.1.1 Tomato plasma membrane 28.25 13.55
Solyc05g005910.2.1 Tomato plasma membrane 30.16 12.58
Solyc08g066940.2.1 Tomato plasma membrane 20.32 12.48
Solyc05g005990.2.1 Tomato plasma membrane 14.6 10.02
Zm00001d038179_P001 Maize cytosol, nucleus, plasma membrane 0.32 0.33
Protein Annotations
EnsemblPlants:Solyc06g005070.1.1EnsemblPlantsGene:Solyc06g005070.1Gene3D:1.20.1250.20GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:MFS_trans_sfInterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF188PFAM:PF00854SUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI0002765930UniProt:K4C2Z1MapMan:24.2.2.9::
Description
No Description!
Coordinates
chr6:+:57089..58268
Molecular Weight (calculated)
35535.1 Da
IEP (calculated)
8.375
GRAVY (calculated)
0.012
Length
315 amino acids
Sequence
(BLAST)
001: MNQWIDRAAV VTGNDMKETC QPNLWRLATV HRTEELKCIL RMLPIWAAGM LHFASHSHVS SFTIQQARSM DRHLSHSFQI PPASMSIFSV LTVLIGLALY
101: ERFFVPFARR FTGHKSGVTC LQRMGIGFAI NILATATSAL AEIKRKKAAA DHNLLDQPMT HVIPISVFWL VPQYCLHGVA EVFMSVGHLE FLIEQFPESM
201: RSTGAALNSL ASSFGNYLGT FIVTLVHQYT GKERNWLPDR NLNRGRLENF YWLMAGVQVV NFVYYLICAS LYKYKPLEEI IEGCKGTDVE LADETMLVDN
301: SKGDGQTDRA RNGKN
Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)
001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
Arabidopsis Description
NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.