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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • plasma membrane 3
  • vacuole 3
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:plasma membrane
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400019424 Potato mitochondrion 53.19 86.9
Solyc06g075500.2.1 Tomato plasma membrane 82.7 83.61
Solyc06g075480.2.1 Tomato plasma membrane 76.68 75.99
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 72.86 73.26
Solyc11g072580.1.1 Tomato plasma membrane 54.28 54.28
VIT_06s0004g03530.t01 Wine grape plasma membrane 54.64 51.99
VIT_06s0004g03520.t01 Wine grape plasma membrane 54.64 51.99
CDX99152 Canola plasma membrane 51.91 51.17
Solyc11g072570.1.1 Tomato plasma membrane 52.09 51.16
KRH22952 Soybean plasma membrane 50.27 51.02
CDY12696 Canola plasma membrane 47.54 50.48
AT3G45680.1 Thale cress plasma membrane 51.18 50.36
CDX81495 Canola plasma membrane 47.54 50.29
CDY18499 Canola plasma membrane 51.0 50.27
Bra021295.1-P Field mustard plasma membrane 50.64 49.91
CDX86031 Canola plasma membrane 14.03 49.68
CDX86030 Canola plasma membrane 24.59 49.63
Bra033955.1-P Field mustard plasma membrane 49.54 49.54
AT3G45710.1 Thale cress plasma membrane 50.46 49.46
Solyc11g072560.1.1 Tomato plasma membrane 46.27 49.42
AT3G45660.2 Thale cress plasma membrane 51.91 49.31
Bra033836.1-P Field mustard plasma membrane 46.81 49.23
AT3G45650.2 Thale cress plasma membrane 52.09 48.97
CDY48147 Canola plasma membrane 49.0 48.82
Solyc06g075440.1.1 Tomato plasma membrane 47.18 48.78
AT3G45700.1 Thale cress plasma membrane 48.63 48.72
AT3G45720.1 Thale cress plasma membrane 49.18 48.65
AT3G45690.1 Thale cress plasma membrane 45.54 48.45
CDX99151 Canola plasma membrane 47.91 47.39
GSMUA_Achr6P15780_001 Banana plasma membrane 41.89 46.09
GSMUA_Achr10P... Banana plasma membrane 39.16 45.07
Os05t0338900-00 Rice plasma membrane 16.76 44.88
TraesCS5B01G152000.1 Wheat plasma membrane 45.54 43.94
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 45.9 43.52
TraesCS4A01G440300.1 Wheat plasma membrane 43.35 43.19
TraesCS7D01G119800.1 Wheat plasma membrane 43.72 43.17
TraesCS7D01G119900.1 Wheat plasma membrane 44.63 43.13
TraesCS5D01G158500.1 Wheat plasma membrane 44.81 43.01
TraesCS4A01G440500.1 Wheat plasma membrane 42.99 42.83
TraesCS7A01G054100.1 Wheat plasma membrane 43.72 42.78
TraesCS5A01G153200.1 Wheat plasma membrane 45.36 42.64
TraesCS4A01G440700.1 Wheat plasma membrane 43.35 42.58
TraesCS4A01G440400.1 Wheat plasma membrane 42.62 42.47
TraesCS4A01G440600.1 Wheat plasma membrane 42.62 42.47
TraesCS7D01G049300.1 Wheat plasma membrane 42.62 42.47
TraesCS7D01G120200.1 Wheat cytosol, plasma membrane, vacuole 43.9 42.43
HORVU7Hr1G025670.1 Barley plasma membrane 43.72 42.33
TraesCS7A01G054000.2 Wheat plasma membrane 42.44 42.29
TraesCS7D01G049400.1 Wheat plasma membrane 42.99 42.14
TraesCS7A01G121700.1 Wheat golgi, peroxisome, plasma membrane 43.53 42.0
TraesCS7B01G020500.1 Wheat plasma membrane 43.17 41.73
HORVU7Hr1G025680.3 Barley plasma membrane 42.99 41.4
TraesCS7B01G020300.1 Wheat plasma membrane 44.44 41.01
TraesCS7A01G121600.1 Wheat plastid 40.98 40.69
HORVU5Hr1G047970.5 Barley mitochondrion 43.53 39.77
TraesCS7B01G020200.1 Wheat peroxisome, plasma membrane, vacuole 25.32 35.82
Solyc03g113420.2.1 Tomato plasma membrane 35.7 33.39
Solyc05g009500.2.1 Tomato plasma membrane 34.24 32.81
Solyc12g007220.1.1 Tomato cytosol, peroxisome, plasma membrane 34.97 32.76
Solyc03g113430.2.1 Tomato plasma membrane 34.43 32.31
Solyc06g071570.2.1 Tomato plasma membrane 33.52 31.83
Solyc04g005070.2.1 Tomato plasma membrane 31.69 30.37
Solyc05g005920.2.1 Tomato plasma membrane 32.24 30.36
Solyc05g006010.2.1 Tomato plasma membrane 32.24 30.26
Solyc05g006000.2.1 Tomato plasma membrane 32.06 30.03
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 33.15 29.98
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 16.39 29.7
Solyc08g066940.2.1 Tomato plasma membrane 27.69 29.63
Solyc03g120560.2.1 Tomato plasma membrane 32.42 29.52
Solyc05g005980.2.1 Tomato plasma membrane 30.97 29.36
Solyc12g044310.1.1 Tomato plasma membrane 33.52 29.25
Solyc05g005970.2.1 Tomato plasma membrane 30.24 28.62
Solyc03g120550.2.1 Tomato plasma membrane 33.33 28.59
Solyc06g005070.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 16.39 28.57
Solyc05g005940.2.1 Tomato plasma membrane 30.05 28.5
Solyc05g005950.2.1 Tomato plasma membrane 29.87 28.47
Solyc05g005990.2.1 Tomato plasma membrane 23.68 28.32
Solyc05g005960.2.1 Tomato plasma membrane 28.78 27.43
Solyc12g095810.1.1 Tomato plasma membrane 30.97 25.88
Solyc03g113440.2.1 Tomato plasma membrane 27.87 25.67
Bra038280.1-P Field mustard plasma membrane 47.72 23.46
Solyc05g005910.2.1 Tomato plasma membrane 32.24 23.44
Protein Annotations
MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006857
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085UniProt:K4C9R4
InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF19
InterPro:PTR2_symporter_CSSUPFAM:SSF103473EnsemblPlantsGene:Solyc06g075490.1EnsemblPlants:Solyc06g075490.1.1TMHMM:TMhelixUniParc:UPI0002766B79
SEG:seg:::::
Description
No Description!
Coordinates
chr6:-:46854560..46857178
Molecular Weight (calculated)
59954.6 Da
IEP (calculated)
9.211
GRAVY (calculated)
0.597
Length
549 amino acids
Sequence
(BLAST)
001: MEAPSVAQLP GRTGGWITFP FIIATTVGLA LSFVGWTSNL IVYLIKEFDV GSIDAAQISN LVNGAGSLTP VIAAIIADSF LGCFTTIWIS SIISLLGTIL
101: LALTATVDSL RPKPCEVGST SCTPKRIGQY VVLYTAIVLA TLGSGGIRST LATIGANQLA DKPKDQGIFF NWFFFFWYFA SVIGSTAIVY VQDNVSWKAG
201: FFICAASNIV ALVIFLLGSK FYTKFKPQGS PFTSLARVIV ACITKRQLAL ASIPEDFFQG CNVVPKALPV VPSRTFRFLN HAAIISEGDV KSDGSISNRW
301: RLCSVQEIED FKTLIKILPL WSTSFFLATT IGVQASLSIL QALAMNRHIG PNFQIPAGSV LVFVLLSTTL FLALFDKFIL PTWKNLTGKS LTPLQRIGIG
401: HVLNFLSMGV SALVESKRLN VAKSNEGSNI VPMSVLWLVP QLVIVGIAEA LYFPGQVSLY YQEFPITLKN LAIAMISVLV GISFYLATAL IDVVRRTSRW
501: LPGDINNGRV DNVYWILVIG GVVNFGYYVI CAWYYKYQNL KQVDSPYDE
Best Arabidopsis Sequence Match ( AT3G45680.1 )
(BLAST)
001: MASLVSGDKE AQISGDPGSK RGGWITFPFM LATLLGLSVT SFGWVMNLIV FLIEEFNIKS IAAAQISNVA NGCLSMLPVV AAILADSFFG NIPVIAASSF
101: ISLLGIVLLT LIASLDYLRP RPCEAGSVLC TPPSKLHLGI LYTALALVTT GAGGTRFTMA SAGANQYEKP KEQGSFFNWY FLTLYAGAIT GATAIVYIQD
201: NASWKLGFGL CAAANLISFI VFVSGKRYYK HDKPMGSPFT SLIRVVVSAT VKRKAVISCN EEDYHHYGLE KEVKTSAAMP SKSFRFLNRA ALMTKDDLNQ
301: KEGSVNNIWR LCSVQEVEDF KAILRVFPLW LSIIFVSTPM VMQTSLIVLQ ALVTDRGLGP NFKVPAGSLQ VIIIITACIV IIMNNWLVFP MYKKLTHKLL
401: TPLQKVGIGQ VLTILSMALS AVVEAKRLKT VENGHPMSVL WLFPPLVIVG IGEAFQFPAN IELFYGEFPE SLRNTATSLT SVVIGISFYL STALIDLIQR
501: TTAWLPNDIN HGRVDNVYWL LVIGGILNFG YFLVCSWVYK YRNLKDNDQE QDPKDGTM
Arabidopsis Description
NPF2.3Protein NRT1/ PTR FAMILY 2.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M175]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.