Factsheet for Solyc08g066940.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074797	Potato	plasma membrane	80.9	78.3
Solyc05g005920.2.1	Tomato	plasma membrane	55.75	49.06
Solyc05g005970.2.1	Tomato	plasma membrane	55.36	48.97
Solyc04g005070.2.1	Tomato	plasma membrane	53.02	47.47
Solyc05g005950.2.1	Tomato	plasma membrane	53.02	47.22
Solyc05g005980.2.1	Tomato	plasma membrane	53.22	47.15
Solyc05g005960.2.1	Tomato	plasma membrane	52.24	46.53
Solyc05g006010.2.1	Tomato	plasma membrane	53.02	46.5
Solyc05g005940.2.1	Tomato	plasma membrane	52.24	46.29
Solyc05g006000.2.1	Tomato	plasma membrane	52.83	46.25
VIT_11s0016g03600.t01	Wine grape	plasma membrane	51.07	44.94
Solyc05g005990.2.1	Tomato	plasma membrane	39.38	44.01
KRH04819	Soybean	plasma membrane	47.37	42.11
KRH16178	Soybean	plasma membrane	46.59	40.85
Solyc12g007220.1.1	Tomato	cytosol, peroxisome, plasma membrane	44.83	39.25
Solyc12g044310.1.1	Tomato	plasma membrane	45.81	37.36
Solyc05g005910.2.1	Tomato	plasma membrane	54.78	37.22
KRH04899	Soybean	cytosol, peroxisome, plasma membrane	39.57	36.91
Solyc03g120560.2.1	Tomato	plasma membrane	41.33	35.16
Solyc03g120550.2.1	Tomato	plasma membrane	42.69	34.22
Solyc12g095810.1.1	Tomato	plasma membrane	41.13	32.12
Solyc05g009500.2.1	Tomato	plasma membrane	35.67	31.94
Solyc03g113430.2.1	Tomato	plasma membrane	35.48	31.11
Solyc11g072560.1.1	Tomato	plasma membrane	30.21	30.16
Solyc06g075500.2.1	Tomato	plasma membrane	31.77	30.02
Solyc06g071570.2.1	Tomato	plasma membrane	33.72	29.93
Solyc03g113420.2.1	Tomato	plasma membrane	33.92	29.64
Solyc06g071090.1.1	Tomato	endoplasmic reticulum, plasma membrane	17.35	29.37
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	34.11	28.83
Solyc11g072570.1.1	Tomato	plasma membrane	31.38	28.8
Solyc06g075450.1.1	Tomato	extracellular, plasma membrane, vacuole	30.41	28.57
Solyc06g075440.1.1	Tomato	plasma membrane	28.85	27.87
Solyc06g075490.1.1	Tomato	plasma membrane	29.63	27.69
Solyc06g075480.2.1	Tomato	plasma membrane	29.43	27.26
Solyc03g113440.2.1	Tomato	plasma membrane	30.02	25.84
Solyc11g072580.1.1	Tomato	plasma membrane	27.29	25.5
VIT_04s0008g03580.t01	Wine grape	plasma membrane	54.19	23.54
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	12.48	20.32

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006857	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR020846	UniProt:K4CLS0	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
PANTHER:PTHR11654	PANTHER:PTHR11654:SF150	SUPFAM:SSF103473	EnsemblPlantsGene:Solyc08g066940.2	EnsemblPlants:Solyc08g066940.2.1	TMHMM:TMhelix
UniParc:UPI000276BEBB	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:-:55810755..55813806

Molecular Weight (calculated)

57009.7 Da

IEP (calculated)

6.262

GRAVY (calculated)

0.303

Length

513 amino acids

Sequence
(BLAST)

001: MAIIEEEEEE ERLLDHLPKT YTKGGLKTMP FIIVNETLEK VASYGLQPNM VIYLMKVYNL EIATATSLLS LWSALSHGLA LLGAFVSDSF LGRFTVVAIG
101: SISSLFGMTI LWLTTMVPQL RPSSCDHFDI NECDRPTPAQ LLVLLFSFGI IALGAGFVRP CSIAFGADQL DNKENPNNKR IMESYFNWYY ATIGMSTLVA
201: TTLIVYIQDA FGWRVGFGIP AILMFFSVTA FLLGSSMYIK VSASESLFTG FFQVLVAAVR KRKIDLPVNC ANYYHQSPDS ESQALTSSFR CLNKACMIED
301: PERDINPDGF ASNSWRLCSV EQVVSLKSLL RVVPMWSSNI MVQLSLNQFS FATLQTKTMD RHIFSDFEIP AGSFSVFMVI TLVMWIAFYD RALVPIKARY
401: TGQPGGLSPV LRMGIGLVLS AAAMVLSAIT EGIRRGIAID QKVPQDVPNI NMSAMWFVPQ YVLLGLADAF NAIGFQQEQR KEEDSHREDN NFTTLCILKK
501: GLLKALVLGS LCK

Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)

001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV

Arabidopsis Description

NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.