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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400068025 Potato plasma membrane 88.71 93.16
Solyc03g120560.2.1 Tomato plasma membrane 61.05 63.68
Solyc03g120550.2.1 Tomato plasma membrane 62.64 61.56
VIT_09s0002g04130.t01 Wine grape plasma membrane 59.94 60.61
KRH09892 Soybean cytosol, peroxisome, plasma membrane 53.26 55.74
KRH44330 Soybean plasma membrane 51.35 55.03
CDY70561 Canola plasma membrane 47.22 54.6
Bra033884.1-P Field mustard plasma membrane 21.46 54.22
CDY69519 Canola plasma membrane 25.12 54.11
CDY69522 Canola plasma membrane 25.12 54.11
KRH47260 Soybean plasma membrane 51.99 53.96
KRH47259 Soybean plasma membrane 52.31 53.85
CDY30141 Canola plasma membrane 50.56 53.63
CDY28371 Canola plasma membrane 41.34 53.5
CDY51257 Canola plastid 41.34 53.5
AT3G16180.1 Thale cress plasma membrane 50.24 53.47
Bra018952.1-P Field mustard plasma membrane 51.51 53.47
CDX97728 Canola plasma membrane 50.08 53.12
Bra027185.1-P Field mustard plasma membrane 50.08 53.12
AT1G52190.1 Thale cress cytosol, peroxisome, plasma membrane 50.4 52.22
KRH09893 Soybean cytosol, peroxisome, plasma membrane 50.87 51.95
KRH44331 Soybean cytosol, peroxisome, plasma membrane 50.08 51.89
CDY20187 Canola plasma membrane 23.53 50.34
Solyc12g007220.1.1 Tomato cytosol, peroxisome, plasma membrane 46.42 49.83
Solyc08g066940.2.1 Tomato plasma membrane 37.36 45.81
Solyc05g005980.2.1 Tomato plasma membrane 42.13 45.77
Solyc05g005970.2.1 Tomato plasma membrane 41.49 45.0
Solyc04g005070.2.1 Tomato plasma membrane 40.38 44.33
Solyc05g005940.2.1 Tomato plasma membrane 40.7 44.21
Solyc05g005920.2.1 Tomato plasma membrane 40.7 43.91
Solyc05g005950.2.1 Tomato plasma membrane 40.06 43.75
Solyc12g095810.1.1 Tomato plasma membrane 45.63 43.68
Solyc05g005960.2.1 Tomato plasma membrane 38.63 42.19
Solyc05g006000.2.1 Tomato plasma membrane 39.11 41.98
Solyc05g006010.2.1 Tomato plasma membrane 38.95 41.88
Solyc05g005990.2.1 Tomato plasma membrane 30.21 41.39
Solyc05g009500.2.1 Tomato plasma membrane 35.61 39.09
Solyc06g071570.2.1 Tomato plasma membrane 33.55 36.51
Solyc05g005910.2.1 Tomato plasma membrane 43.56 36.29
Solyc03g113420.2.1 Tomato plasma membrane 33.86 36.29
Bra021168.1-P Field mustard plasma membrane 50.08 36.17
Solyc03g113430.2.1 Tomato plasma membrane 33.07 35.56
Solyc11g072570.1.1 Tomato plasma membrane 30.37 34.17
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 32.91 34.1
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 16.22 33.66
Solyc11g072560.1.1 Tomato plasma membrane 27.5 33.66
Solyc06g075490.1.1 Tomato plasma membrane 29.25 33.52
Solyc06g075480.2.1 Tomato plasma membrane 29.25 33.21
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 28.78 33.15
Solyc06g075500.2.1 Tomato plasma membrane 28.62 33.15
Solyc06g075440.1.1 Tomato plasma membrane 27.03 32.02
Solyc11g072580.1.1 Tomato plasma membrane 26.87 30.78
Solyc03g113440.2.1 Tomato plasma membrane 28.3 29.87
Solyc06g005070.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 14.79 29.52
Protein Annotations
MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006857
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846
UniProt:K4DFB9InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famScanProsite:PS01022
PANTHER:PTHR11654PANTHER:PTHR11654:SF157InterPro:PTR2_symporter_CSSUPFAM:SSF103473SignalP:SignalP-noTMEnsemblPlantsGene:Solyc12g044310.1
EnsemblPlants:Solyc12g044310.1.1TMHMM:TMhelixUniParc:UPI00027695B4SEG:seg::
Description
No Description!
Coordinates
chr12:+:38679404..38683400
Molecular Weight (calculated)
70389.5 Da
IEP (calculated)
9.264
GRAVY (calculated)
0.288
Length
629 amino acids
Sequence
(BLAST)
001: MLLVSIHFSI FPLFFIVFSS SFFSLKSQVS SSMELSTINS SKTEDHHNKI LSHNDNPTLP TMQLQRSKGG LVTMPFIIAN EALERVATFG VLPNMTFYLM
101: KEYRMGVTNA QNLLFYWSSA TNFLPLIGAF IADSYLGRFL TIGFGSIFSL LGTIVLWLTA MIPKARPPPC DLLVSSQACK SATTAQYTIL ISSFMLMSIG
201: AGGIRPCSLA FGANQFDKRD NNNTKRVLET YFNWYYAAVM ISVLIAMTGI VYLQDHMGWK IGFGVPVIIM FFSAFLFFLA TPLYIKQNVI NNLLGRFVQV
301: IVVAYKNRKL SYPEQNSGYH YNKGSELVVP TSKLRFLNKA CIIKSPEDVK QDGVAVDSWS LCTVEQVEEL KALVRVMPLW STGIMISINL SQSSFPLLQA
401: KSMDRHITKR VEIPAASFGV FTVIALTVWL VVYDRVILPL GSRIRGKPFR IGTKERMGIG IFFSCMAMLL SGIIEHIRRR KSINQGLLNN PEGIVAMSAM
501: WLVPQHCLNG IAEAFNAIGQ IEFYYSELPK SMSSIATAMF GLGTAVANLL ASVILSNVDS ITKREGKESW VSSNINRGHY ENYYWLLAIM TCLNLVYFMV
601: CSWAYGPCVE SRSKKMDEKD GEMELENVS
Best Arabidopsis Sequence Match ( AT1G52190.1 )
(BLAST)
001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
Arabidopsis Description
NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.