Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 5
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400068025 | Potato | plasma membrane | 88.71 | 93.16 |
Solyc03g120560.2.1 | Tomato | plasma membrane | 61.05 | 63.68 |
Solyc03g120550.2.1 | Tomato | plasma membrane | 62.64 | 61.56 |
VIT_09s0002g04130.t01 | Wine grape | plasma membrane | 59.94 | 60.61 |
KRH09892 | Soybean | cytosol, peroxisome, plasma membrane | 53.26 | 55.74 |
KRH44330 | Soybean | plasma membrane | 51.35 | 55.03 |
CDY70561 | Canola | plasma membrane | 47.22 | 54.6 |
Bra033884.1-P | Field mustard | plasma membrane | 21.46 | 54.22 |
CDY69519 | Canola | plasma membrane | 25.12 | 54.11 |
CDY69522 | Canola | plasma membrane | 25.12 | 54.11 |
KRH47260 | Soybean | plasma membrane | 51.99 | 53.96 |
KRH47259 | Soybean | plasma membrane | 52.31 | 53.85 |
CDY30141 | Canola | plasma membrane | 50.56 | 53.63 |
CDY28371 | Canola | plasma membrane | 41.34 | 53.5 |
CDY51257 | Canola | plastid | 41.34 | 53.5 |
AT3G16180.1 | Thale cress | plasma membrane | 50.24 | 53.47 |
Bra018952.1-P | Field mustard | plasma membrane | 51.51 | 53.47 |
CDX97728 | Canola | plasma membrane | 50.08 | 53.12 |
Bra027185.1-P | Field mustard | plasma membrane | 50.08 | 53.12 |
AT1G52190.1 | Thale cress | cytosol, peroxisome, plasma membrane | 50.4 | 52.22 |
KRH09893 | Soybean | cytosol, peroxisome, plasma membrane | 50.87 | 51.95 |
KRH44331 | Soybean | cytosol, peroxisome, plasma membrane | 50.08 | 51.89 |
CDY20187 | Canola | plasma membrane | 23.53 | 50.34 |
Solyc12g007220.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 46.42 | 49.83 |
Solyc08g066940.2.1 | Tomato | plasma membrane | 37.36 | 45.81 |
Solyc05g005980.2.1 | Tomato | plasma membrane | 42.13 | 45.77 |
Solyc05g005970.2.1 | Tomato | plasma membrane | 41.49 | 45.0 |
Solyc04g005070.2.1 | Tomato | plasma membrane | 40.38 | 44.33 |
Solyc05g005940.2.1 | Tomato | plasma membrane | 40.7 | 44.21 |
Solyc05g005920.2.1 | Tomato | plasma membrane | 40.7 | 43.91 |
Solyc05g005950.2.1 | Tomato | plasma membrane | 40.06 | 43.75 |
Solyc12g095810.1.1 | Tomato | plasma membrane | 45.63 | 43.68 |
Solyc05g005960.2.1 | Tomato | plasma membrane | 38.63 | 42.19 |
Solyc05g006000.2.1 | Tomato | plasma membrane | 39.11 | 41.98 |
Solyc05g006010.2.1 | Tomato | plasma membrane | 38.95 | 41.88 |
Solyc05g005990.2.1 | Tomato | plasma membrane | 30.21 | 41.39 |
Solyc05g009500.2.1 | Tomato | plasma membrane | 35.61 | 39.09 |
Solyc06g071570.2.1 | Tomato | plasma membrane | 33.55 | 36.51 |
Solyc05g005910.2.1 | Tomato | plasma membrane | 43.56 | 36.29 |
Solyc03g113420.2.1 | Tomato | plasma membrane | 33.86 | 36.29 |
Bra021168.1-P | Field mustard | plasma membrane | 50.08 | 36.17 |
Solyc03g113430.2.1 | Tomato | plasma membrane | 33.07 | 35.56 |
Solyc11g072570.1.1 | Tomato | plasma membrane | 30.37 | 34.17 |
Solyc05g006920.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 32.91 | 34.1 |
Solyc06g071090.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 16.22 | 33.66 |
Solyc11g072560.1.1 | Tomato | plasma membrane | 27.5 | 33.66 |
Solyc06g075490.1.1 | Tomato | plasma membrane | 29.25 | 33.52 |
Solyc06g075480.2.1 | Tomato | plasma membrane | 29.25 | 33.21 |
Solyc06g075450.1.1 | Tomato | extracellular, plasma membrane, vacuole | 28.78 | 33.15 |
Solyc06g075500.2.1 | Tomato | plasma membrane | 28.62 | 33.15 |
Solyc06g075440.1.1 | Tomato | plasma membrane | 27.03 | 32.02 |
Solyc11g072580.1.1 | Tomato | plasma membrane | 26.87 | 30.78 |
Solyc03g113440.2.1 | Tomato | plasma membrane | 28.3 | 29.87 |
Solyc06g005070.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 14.79 | 29.52 |
Protein Annotations
MapMan:24.2.2.9 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006857 |
GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 |
UniProt:K4DFB9 | InterPro:MFS_dom | InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam | ScanProsite:PS01022 |
PANTHER:PTHR11654 | PANTHER:PTHR11654:SF157 | InterPro:PTR2_symporter_CS | SUPFAM:SSF103473 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc12g044310.1 |
EnsemblPlants:Solyc12g044310.1.1 | TMHMM:TMhelix | UniParc:UPI00027695B4 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr12:+:38679404..38683400
Molecular Weight (calculated)
70389.5 Da
IEP (calculated)
9.264
GRAVY (calculated)
0.288
Length
629 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLVSIHFSI FPLFFIVFSS SFFSLKSQVS SSMELSTINS SKTEDHHNKI LSHNDNPTLP TMQLQRSKGG LVTMPFIIAN EALERVATFG VLPNMTFYLM
101: KEYRMGVTNA QNLLFYWSSA TNFLPLIGAF IADSYLGRFL TIGFGSIFSL LGTIVLWLTA MIPKARPPPC DLLVSSQACK SATTAQYTIL ISSFMLMSIG
201: AGGIRPCSLA FGANQFDKRD NNNTKRVLET YFNWYYAAVM ISVLIAMTGI VYLQDHMGWK IGFGVPVIIM FFSAFLFFLA TPLYIKQNVI NNLLGRFVQV
301: IVVAYKNRKL SYPEQNSGYH YNKGSELVVP TSKLRFLNKA CIIKSPEDVK QDGVAVDSWS LCTVEQVEEL KALVRVMPLW STGIMISINL SQSSFPLLQA
401: KSMDRHITKR VEIPAASFGV FTVIALTVWL VVYDRVILPL GSRIRGKPFR IGTKERMGIG IFFSCMAMLL SGIIEHIRRR KSINQGLLNN PEGIVAMSAM
501: WLVPQHCLNG IAEAFNAIGQ IEFYYSELPK SMSSIATAMF GLGTAVANLL ASVILSNVDS ITKREGKESW VSSNINRGHY ENYYWLLAIM TCLNLVYFMV
601: CSWAYGPCVE SRSKKMDEKD GEMELENVS
101: KEYRMGVTNA QNLLFYWSSA TNFLPLIGAF IADSYLGRFL TIGFGSIFSL LGTIVLWLTA MIPKARPPPC DLLVSSQACK SATTAQYTIL ISSFMLMSIG
201: AGGIRPCSLA FGANQFDKRD NNNTKRVLET YFNWYYAAVM ISVLIAMTGI VYLQDHMGWK IGFGVPVIIM FFSAFLFFLA TPLYIKQNVI NNLLGRFVQV
301: IVVAYKNRKL SYPEQNSGYH YNKGSELVVP TSKLRFLNKA CIIKSPEDVK QDGVAVDSWS LCTVEQVEEL KALVRVMPLW STGIMISINL SQSSFPLLQA
401: KSMDRHITKR VEIPAASFGV FTVIALTVWL VVYDRVILPL GSRIRGKPFR IGTKERMGIG IFFSCMAMLL SGIIEHIRRR KSINQGLLNN PEGIVAMSAM
501: WLVPQHCLNG IAEAFNAIGQ IEFYYSELPK SMSSIATAMF GLGTAVANLL ASVILSNVDS ITKREGKESW VSSNINRGHY ENYYWLLAIM TCLNLVYFMV
601: CSWAYGPCVE SRSKKMDEKD GEMELENVS
001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
Arabidopsis Description
NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.