Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69522 | Canola | plasma membrane | 76.19 | 76.71 |
| CDY69519 | Canola | plasma membrane | 76.19 | 76.71 |
| CDY70561 | Canola | plasma membrane | 96.6 | 52.21 |
| CDY30141 | Canola | plasma membrane | 90.82 | 45.03 |
| CDX97728 | Canola | plasma membrane | 90.82 | 45.03 |
| AT3G16180.1 | Thale cress | plasma membrane | 87.07 | 43.32 |
| CDY65728 | Canola | cytosol | 26.87 | 39.7 |
| CDY69402 | Canola | plasma membrane | 38.78 | 38.26 |
| CDY28371 | Canola | plasma membrane | 59.52 | 36.01 |
| CDY51257 | Canola | plastid | 57.48 | 34.77 |
| Bra021168.1-P | Field mustard | plasma membrane | 98.98 | 33.41 |
| CDX86030 | Canola | plasma membrane | 29.59 | 31.99 |
| VIT_09s0002g04130.t01 | Wine grape | plasma membrane | 60.54 | 28.62 |
| Solyc03g120560.2.1 | Tomato | plasma membrane | 50.68 | 24.71 |
| PGSC0003DMT400068025 | Potato | plasma membrane | 49.66 | 24.37 |
| CDY09846 | Canola | plasma membrane | 35.37 | 24.24 |
| Solyc03g120550.2.1 | Tomato | plasma membrane | 51.36 | 23.59 |
| Solyc12g044310.1.1 | Tomato | plasma membrane | 50.34 | 23.53 |
| CDY67993 | Canola | plasma membrane | 40.82 | 21.58 |
| PGSC0003DMT400006545 | Potato | plasma membrane | 31.97 | 20.13 |
| CDY07377 | Canola | cytosol, peroxisome, plasma membrane | 40.48 | 19.97 |
| CDY38595 | Canola | cytosol, peroxisome, plasma membrane | 40.14 | 19.93 |
| CDY04237 | Canola | cytosol, peroxisome, plasma membrane | 39.8 | 19.66 |
| CDY05592 | Canola | plasma membrane | 37.76 | 19.41 |
| CDY52504 | Canola | plasma membrane | 37.76 | 19.41 |
| CDY56086 | Canola | cytosol, peroxisome, plasma membrane | 38.78 | 19.29 |
| CDY53067 | Canola | cytosol, peroxisome, plasma membrane | 38.44 | 19.02 |
| CDX86198 | Canola | peroxisome | 36.39 | 18.8 |
| CDY28441 | Canola | cytosol, peroxisome, plasma membrane | 35.71 | 18.49 |
| CDY40280 | Canola | plasma membrane | 35.71 | 18.49 |
| CDY23545 | Canola | cytosol, peroxisome, plasma membrane | 38.1 | 18.45 |
| CDY54537 | Canola | cytosol, peroxisome, plasma membrane | 38.78 | 18.45 |
| CDY11647 | Canola | plastid | 38.78 | 18.42 |
| CDY38767 | Canola | plastid | 38.78 | 18.33 |
| CDY25813 | Canola | cytosol, peroxisome, plasma membrane | 35.37 | 18.31 |
| CDY48389 | Canola | cytosol, peroxisome, plasma membrane | 37.76 | 18.29 |
| CDY11648 | Canola | plasma membrane | 33.67 | 17.97 |
| CDY38766 | Canola | plasma membrane | 33.67 | 17.97 |
| CDY21692 | Canola | plasma membrane | 35.03 | 17.94 |
| CDY26715 | Canola | plasma membrane | 35.37 | 17.93 |
| CDX83801 | Canola | cytosol, peroxisome, plasma membrane | 35.71 | 17.77 |
| CDX87266 | Canola | peroxisome | 34.35 | 17.63 |
| CDX81902 | Canola | cytosol, peroxisome, plasma membrane | 35.37 | 17.57 |
| CDX81495 | Canola | plasma membrane | 30.95 | 17.53 |
| CDY16763 | Canola | peroxisome | 34.01 | 17.42 |
| CDX96690 | Canola | plasma membrane | 35.71 | 17.3 |
| CDY12696 | Canola | plasma membrane | 30.27 | 17.21 |
| CDX84344 | Canola | plasma membrane | 35.03 | 17.11 |
| CDY00315 | Canola | plasma membrane | 35.03 | 16.83 |
| CDY51783 | Canola | cytosol, peroxisome, plasma membrane | 34.35 | 16.75 |
| CDY21805 | Canola | cytosol, peroxisome, plasma membrane | 35.37 | 16.75 |
| CDY30731 | Canola | plasma membrane | 33.67 | 16.53 |
| CDY45754 | Canola | plasma membrane | 33.67 | 16.45 |
| CDY36913 | Canola | cytosol, peroxisome, plasma membrane | 34.35 | 16.42 |
| CDY69433 | Canola | golgi, peroxisome, plastid | 35.37 | 16.4 |
| CDY45756 | Canola | plasma membrane | 31.63 | 16.29 |
| CDX83027 | Canola | cytosol, peroxisome, plasma membrane | 33.33 | 16.28 |
| CDX68450 | Canola | cytosol, peroxisome, plasma membrane | 33.67 | 16.1 |
| CDX91207 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 19.05 | 16.09 |
| CDY18499 | Canola | plasma membrane | 29.25 | 15.44 |
| CDX99152 | Canola | plasma membrane | 28.91 | 15.26 |
| CDY16764 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 30.27 | 15.01 |
| CDX99151 | Canola | plasma membrane | 28.23 | 14.96 |
| CDY52480 | Canola | plasma membrane | 23.13 | 14.75 |
| CDY48147 | Canola | plasma membrane | 26.19 | 13.97 |
| CDX96007 | Canola | cytosol, peroxisome, plasma membrane | 30.61 | 13.01 |
| CDX69747 | Canola | plasma membrane | 41.5 | 7.89 |
| CDY68532 | Canola | cytosol | 0.0 | 0.0 |
| CDX86031 | Canola | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | GO:A0A078G5E3 | UniProt:A0A078G5E3 | EnsemblPlants:CDY20187 | ProteinID:CDY20187 |
| ProteinID:CDY20187.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00010058001 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF157 |
| SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0004EDC4BA | SEG:seg | : | : |
Description
BnaA01g28150DBnaA01g28150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5E3]
Coordinates
chrLK032103:-:595496..597760
Molecular Weight (calculated)
32236.7 Da
IEP (calculated)
8.797
GRAVY (calculated)
0.418
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MENPPDQTES KEMMLQPRII RPKGGLLTMP FIIANEGFEK VASYGLLQNM ILYLMSDYGL GLVKGQNVLF MWVAATNFMP LVGAFLSDSY LGRFLTISIA
101: SLSSFLGMMV LWLTAMLPQV KPSPCVASTV TKCSSTAATS SQLALLYFAF GLISIGSGGI RPCSLAFGAD QLDNKENPKN ERVLESFFGW YYASSSVAVL
201: IAFTVIVYIQ DHLGWRIGFG VPAILMLLAS IVFVFASPLY VKRKATKSLF TGLAQVAVAA YVNRNLVLPV HNDSYGCYYH LNDSELKAPS DKLR
101: SLSSFLGMMV LWLTAMLPQV KPSPCVASTV TKCSSTAATS SQLALLYFAF GLISIGSGGI RPCSLAFGAD QLDNKENPKN ERVLESFFGW YYASSSVAVL
201: IAFTVIVYIQ DHLGWRIGFG VPAILMLLAS IVFVFASPLY VKRKATKSLF TGLAQVAVAA YVNRNLVLPV HNDSYGCYYH LNDSELKAPS DKLR
001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
Arabidopsis Description
NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.