CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035886.1-P	Field mustard	plasma membrane	78.08	93.16
CDY16763	Canola	peroxisome	73.02	75.44
CDX87266	Canola	peroxisome	72.68	75.22
CDY45756	Canola	plasma membrane	70.32	73.03
CDY00315	Canola	plasma membrane	72.01	69.77
CDY30731	Canola	plasma membrane	70.32	69.62
CDX84344	Canola	plasma membrane	70.49	69.44
CDY45754	Canola	plasma membrane	70.32	69.27
AT5G62680.1	Thale cress	golgi, peroxisome, vacuole	70.99	68.34
CDY36913	Canola	cytosol, peroxisome, plasma membrane	65.43	63.09
CDY51783	Canola	cytosol, peroxisome, plasma membrane	63.74	62.69
CDY69433	Canola	golgi, peroxisome, plastid	66.44	62.15
CDY21805	Canola	cytosol, peroxisome, plasma membrane	64.59	61.67
CDX68450	Canola	cytosol, peroxisome, plasma membrane	62.73	60.49
CDX83027	Canola	cytosol, peroxisome, plasma membrane	61.21	60.3
CDY09846	Canola	plasma membrane	39.29	54.31
CDX83801	Canola	cytosol, peroxisome, plasma membrane	52.78	52.96
CDY26715	Canola	plasma membrane	51.77	52.93
CDX81902	Canola	cytosol, peroxisome, plasma membrane	52.28	52.36
CDY21692	Canola	plasma membrane	50.59	52.26
CDX96690	Canola	plasma membrane	52.11	50.91
KRH03408	Soybean	cytosol, peroxisome, plasma membrane	50.08	50.17
KRH56970	Soybean	cytosol, peroxisome, plasma membrane	49.75	49.41
Solyc03g113420.2.1	Tomato	plasma membrane	48.9	49.4
PGSC0003DMT400065196	Potato	plasma membrane	48.9	49.07
KRH03412	Soybean	plasma membrane	46.71	47.27
KRH03409	Soybean	plasma membrane	48.57	47.06
KRH56969	Soybean	plasma membrane	48.4	46.97
KRH56968	Soybean	plasma membrane	47.05	46.81
GSMUA_Achr5P15010_001	Banana	cytosol, peroxisome, plasma membrane	41.65	44.11
GSMUA_Achr5P15030_001	Banana	cytosol	34.4	43.04
GSMUA_Achr4P22320_001	Banana	plasma membrane	36.09	42.29
Zm00001d031213_P001	Maize	plasma membrane	36.26	42.24
Os03t0687000-02	Rice	plasma membrane	41.32	41.74
TraesCS2A01G045500.1	Wheat	plasma membrane	42.16	41.74
TraesCS2D01G044200.1	Wheat	plasma membrane	42.16	41.74
Os12t0638300-01	Rice	extracellular, plasma membrane	41.15	41.57
Zm00001d033528_P003	Maize	cytosol, peroxisome, plasma membrane	41.15	41.43
EER91066	Sorghum	cytosol, peroxisome, plasma membrane	41.32	41.32
Zm00001d013529_P002	Maize	plasma membrane	41.15	41.29
TraesCS2B01G057700.1	Wheat	plasma membrane	41.65	41.24
TraesCS4D01G026800.1	Wheat	golgi, unclear	40.64	40.44
TraesCS4B01G029600.1	Wheat	cytosol, peroxisome, plasma membrane	40.47	40.34
TraesCS4A01G283900.1	Wheat	golgi, unclear	40.47	40.2
TraesCS5D01G012500.1	Wheat	cytosol, peroxisome, plasma membrane	41.32	40.1
TraesCS5A01G037900.1	Wheat	cytosol, peroxisome, plasma membrane	41.65	40.1
HORVU5Hr1G000800.3	Barley	cytosol, peroxisome, plasma membrane	40.81	40.07
TraesCS5D01G045300.1	Wheat	cytosol, peroxisome, plasma membrane	41.48	40.07
TraesCS5B01G001100.1	Wheat	cytosol, nucleus, plasma membrane	40.98	40.03
TraesCS5A01G004400.1	Wheat	cytosol, nucleus, plasma membrane	41.32	40.03
Os12t0638200-01	Rice	cytosol, endoplasmic reticulum, peroxisome	39.63	39.97
HORVU4Hr1G004460.1	Barley	cytosol, peroxisome, plasma membrane	40.3	39.77
HORVU7Hr1G018540.1	Barley	cytosol, nucleus, plasma membrane	40.98	39.58
TraesCS2D01G044000.1	Wheat	plasma membrane	40.13	39.53
TraesCS2B01G057600.1	Wheat	cytosol, peroxisome, plasma membrane	39.97	39.17
TraesCS5B01G039100.1	Wheat	cytosol, nucleus, plasma membrane	40.81	39.16
KXG24141	Sorghum	cytosol, peroxisome, plasma membrane	39.12	39.06
EES16414	Sorghum	cytosol, peroxisome, plasma membrane	39.12	38.86
CDY56086	Canola	cytosol, peroxisome, plasma membrane	37.44	37.56
CDY48389	Canola	cytosol, peroxisome, plasma membrane	38.11	37.23
CDY53067	Canola	cytosol, peroxisome, plasma membrane	37.27	37.21
CDY23545	Canola	cytosol, peroxisome, plasma membrane	37.77	36.9
CDY11647	Canola	plastid	37.94	36.35
EER98133	Sorghum	plasma membrane	39.63	36.1
CDY38767	Canola	plastid	37.77	36.01
CDY40280	Canola	plasma membrane	33.9	35.39
HORVU2Hr1G006820.2	Barley	golgi, plasma membrane	40.3	34.84
CDY25813	Canola	cytosol, peroxisome, plasma membrane	33.22	34.68
CDY28441	Canola	cytosol, peroxisome, plasma membrane	33.22	34.68
CDY52480	Canola	plasma membrane	25.3	32.54
CDX86198	Canola	peroxisome	31.2	32.51
CDY11648	Canola	plasma membrane	30.19	32.49
CDY38766	Canola	plasma membrane	30.19	32.49
CDY05592	Canola	plasma membrane	31.03	32.17
CDY52504	Canola	plasma membrane	31.03	32.17
CDY20187	Canola	plasma membrane	15.01	30.27
CDY38595	Canola	cytosol, peroxisome, plasma membrane	30.02	30.07
CDY07377	Canola	cytosol, peroxisome, plasma membrane	29.34	29.19
CDX99152	Canola	plasma membrane	27.32	29.08
CDY04237	Canola	cytosol, peroxisome, plasma membrane	29.17	29.08
CDY69519	Canola	plasma membrane	14.17	28.77
CDY69402	Canola	plasma membrane	14.33	28.52
CDX91207	Canola	cytosol, endoplasmic reticulum, plasma membrane	16.69	28.45
CDY69522	Canola	plasma membrane	14.0	28.42
CDX97728	Canola	plasma membrane	28.33	28.33
CDY30141	Canola	plasma membrane	28.33	28.33
CDY48147	Canola	plasma membrane	26.14	28.13
CDY54537	Canola	cytosol, peroxisome, plasma membrane	29.17	27.99
CDY28371	Canola	plasma membrane	22.6	27.57
CDY18499	Canola	plasma membrane	25.8	27.47
CDY70561	Canola	plasma membrane	25.13	27.39
CDY51257	Canola	plastid	22.43	27.37
CDY65728	Canola	cytosol	9.11	27.14
CDY12696	Canola	plasma membrane	23.44	26.89
CDY67993	Canola	plasma membrane	24.96	26.62
CDX81495	Canola	plasma membrane	23.27	26.59
CDX86030	Canola	plasma membrane	12.14	26.47
CDX99151	Canola	plasma membrane	23.1	24.68
CDX96007	Canola	cytosol, peroxisome, plasma membrane	27.82	23.84
CDX86031	Canola	plasma membrane	6.07	23.23
CDX69747	Canola	plasma membrane	25.13	9.64
CDY68532	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:A0A078FUP8	UniProt:A0A078FUP8	EnsemblPlants:CDY16764	ProteinID:CDY16764
ProteinID:CDY16764.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00094640001	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF59
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0004EE0D1C	SEG:seg	:	:

Description

BnaA09g06180DBnaA09g06180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUP8]

Coordinates

chrLK032067:+:232003..234726

Molecular Weight (calculated)

65457.6 Da

IEP (calculated)

9.525

GRAVY (calculated)

0.392

Length

593 amino acids

Sequence
(BLAST)

001: MKAPHVVHWE AALRVVRFLK GCPGQGILLR SDSNLELSVY VDADWSTCPL TRRSLSSYVV LLGGNPISWK TKKQKTVSDS SAEAEYRAMA AATKEMKWIV
101: PLMKELGVQV DKPVPFFCDR NETFEKLGII GTLSNLLVYL TSVFNMKSVT AATIINAFAG TVNFGTFVAA FLCDTYFGRY KTLNVAVLAC FLGSLAILLT
201: AAVPQLHPAP CGTASSCIGP SGGQIAFLMM GLGILVVGAG GIRPCNLAFG ADQFNPKSGS GKRGIDSFFN WYFFTFTFAQ ILSLTVVVYV QSNVSWTIGL
301: TIPVVLMFLA SVIFFAGASC MLRSKPQVVH WLPWLNLYNY YPSKYANAKL KYTEQFRFLD KAAILTPEDK LEADGKPVNP WNLCTMQQVE EVKCIMRVLP
401: IWFASSIYYL TIAQQMTYPV FQALQSDRRL GSGGFMIPAA TYVVFLMTGM TLFIIFYDRV LVPTFKRITG IETGITLLQR IGAGIFFALL SLIVSGFVEE
501: RRRTLALTKP TLGLAPRKGE ISSMSAMWLI PQLVLAGIAD AFGAIGQMEF YYKKFPENMR SFAGSIFYVG GGVSSYISSF LITTVHRMTQ NDL

Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)

001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV

Arabidopsis Description

NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.