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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 2
  • plasma membrane 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, peroxisome
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os12t0638300-01 Rice extracellular, plasma membrane 70.75 70.87
Zm00001d031213_P001 Maize plasma membrane 58.67 67.78
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 65.65 63.91
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 64.12 63.47
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 65.82 63.34
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 65.31 63.26
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 65.65 63.07
TraesCS2B01G057700.1 Wheat plasma membrane 64.12 62.94
TraesCS2A01G045500.1 Wheat plasma membrane 63.78 62.6
EES16414 Sorghum cytosol, peroxisome, plasma membrane 63.44 62.48
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 65.14 62.38
TraesCS2D01G044200.1 Wheat plasma membrane 63.27 62.1
TraesCS2D01G044000.1 Wheat plasma membrane 62.76 61.3
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 64.12 61.2
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 62.41 60.66
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 63.61 60.52
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 62.76 60.1
GSMUA_Achr5P15030_001 Banana cytosol 45.58 56.54
Os03t0687000-02 Rice plasma membrane 55.27 55.37
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 51.7 54.29
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 62.24 53.35
Os07t0190650-00 Rice cytosol, peroxisome, plasma membrane 53.74 51.13
Solyc03g113430.2.1 Tomato plasma membrane 50.85 51.11
PGSC0003DMT400065197 Potato mitochondrion 50.85 51.11
VIT_14s0066g02590.t01 Wine grape plasma membrane 50.85 51.11
Solyc06g071570.2.1 Tomato plasma membrane 47.79 48.62
Bra035886.1-P Field mustard plasma membrane 40.99 48.49
CDY09846 Canola plasma membrane 35.37 48.48
PGSC0003DMT400069660 Potato plasma membrane 47.11 47.92
KRH56968 Soybean plasma membrane 48.47 47.82
CDY45756 Canola plasma membrane 46.09 47.46
Solyc03g113420.2.1 Tomato plasma membrane 46.94 47.02
PGSC0003DMT400065196 Potato plasma membrane 47.11 46.87
KRH03412 Soybean plasma membrane 46.6 46.76
CDY30731 Canola plasma membrane 46.77 45.91
KRH56970 Soybean cytosol, peroxisome, plasma membrane 46.6 45.9
KRH03408 Soybean cytosol, peroxisome, plasma membrane 46.09 45.78
Bra029248.1-P Field mustard plasma membrane 47.62 45.75
CDX84344 Canola plasma membrane 46.77 45.68
CDY45754 Canola plasma membrane 46.6 45.51
CDY00315 Canola plasma membrane 47.28 45.42
Bra035885.1-P Field mustard peroxisome 43.54 45.39
AT5G62680.1 Thale cress golgi, peroxisome, vacuole 47.45 45.29
Bra010111.1-P Field mustard plasma membrane 47.11 45.26
CDY26715 Canola plasma membrane 44.56 45.17
Bra025695.1-P Field mustard plasma membrane 44.56 45.17
AT1G18880.1 Thale cress cytosol, peroxisome, plasma membrane 45.07 45.14
CDY21692 Canola plasma membrane 44.05 45.12
CDX81902 Canola cytosol, peroxisome, plasma membrane 45.41 45.1
KRH56969 Soybean plasma membrane 46.77 45.01
CDY16763 Canola peroxisome 43.88 44.95
CDX87266 Canola peroxisome 43.71 44.85
KRH03409 Soybean plasma membrane 46.6 44.77
Bra031054.1-P Field mustard cytosol, peroxisome, plasma membrane 45.07 44.76
CDX83801 Canola cytosol, peroxisome, plasma membrane 44.9 44.67
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 22.79 44.22
Bra019521.1-P Field mustard plasma membrane 45.58 43.86
CDY51783 Canola cytosol, peroxisome, plasma membrane 44.9 43.78
Bra033782.1-P Field mustard cytosol, peroxisome, plasma membrane 45.75 43.74
CDX83027 Canola cytosol, peroxisome, plasma membrane 44.73 43.69
Bra018096.1-P Field mustard cytosol, peroxisome, plasma membrane 45.58 43.58
CDY36913 Canola cytosol, peroxisome, plasma membrane 45.58 43.58
CDX68450 Canola cytosol, peroxisome, plasma membrane 45.41 43.41
AT3G47960.1 Thale cress plasma membrane 46.43 42.92
CDX96690 Canola plasma membrane 44.22 42.83
CDY21805 Canola cytosol, peroxisome, plasma membrane 45.07 42.67
CDY69433 Canola golgi, peroxisome, plastid 45.24 41.96
Os01t0913300-01 Rice plasma membrane 40.65 39.83
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 39.97 39.63
Os06t0264500-01 Rice extracellular 39.8 39.2
Os05t0410500-01 Rice cytosol, plasma membrane 36.73 37.31
Os01t0761400-01 Rice plasma membrane 36.22 37.11
Os05t0411100-00 Rice cytosol, nucleus, plasma membrane 38.61 36.73
Os01t0960900-00 Rice cytosol 16.67 35.38
Os05t0338900-00 Rice plasma membrane 12.24 35.12
Os01t0761500-01 Rice plasma membrane 34.69 34.58
Os04t0660900-01 Rice plasma membrane, plastid 36.73 34.23
Os05t0410900-02 Rice plasma membrane 34.35 33.78
Os05t0410800-01 Rice cytosol, extracellular, mitochondrion 11.73 31.08
Bra016534.1-P Field mustard plastid 45.24 25.78
VIT_17s0000g05550.t01 Wine grape plasma membrane 51.36 17.62
Os07t0190600-01 Rice cytosol, plastid 0.68 0.74
Os01t0960800-01 Rice mitochondrion 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EntrezGene:4352905ProteinID:ABA99987.1ProteinID:BAF30396.1ProteinID:BAT18272.1
ProteinID:EEE53676.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_trans_sfEnsemblPlantsGene:Os12g0638200EnsemblPlants:Os12t0638200-01PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654
PANTHER:PTHR11654:SF59UniProt:Q2QLL1SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0000680B5DRefSeq:XP_015620477.1
SEG:seg:::::
Description
PROTEIN TRANSPORTER 2Similar to Peptide transporter. (Os12t0638200-01);Non-protein coding transcript. (Os12t0638200-02)
Coordinates
chr12:-:27346312..27350659
Molecular Weight (calculated)
62801.3 Da
IEP (calculated)
8.992
GRAVY (calculated)
0.330
Length
588 amino acids
Sequence
(BLAST)
001: MPPAPSQEQT KLAPEKQQHI SGHGEQAVRY HGWKVMPYVI GNETCERLGT IGTTANLLVY LTTVFHIPSA AAATLLNVFS GTSNLAPLLG AFLCDAYLGR
101: YATLAAASIA SFLGMLVLTL TAAIPSLHPP PCASSSSTSC QGPTHRQLAA LLASFAFLVV GAGGIRPCNL AFGADQFDPA TAAGRRGIAS FFNWYYFTFT
201: IAMMVSATLI IYLQSNINWA IGLAVPTALM ALSCALFFMG TRLYVRVRPE GSPFTSFAQV LVAAARKRRL PAPASPADDL FDPPHRSKLV AKIKHTDQFR
301: WLDKAAVVTA EDAVVDGMSA AAANPWRLCT VQQVEEVKVL ARMIPVWSSS IVYYVMLTQL GTYTVFQVMQ SDRRVGRSGF EVPAGSMVVF NMVALTAWLP
401: VYDRAVVPAL RRVTGREEGI SQLQRIGIGL ALSVATMAVA VAVEQRRRGA GGGSSSSWAW MVPQQAMAGL SEAFAAIGLN ELCYKESPES MRSVAGALSP
501: LALAVASYAS GAMVTAVERA TGWLAQDIDK GRVDLFYLVV GAMSAANLAY FVVCALWYRS KNIADHGGVE LLQTSSKHNA DAPPAMAV
Best Arabidopsis Sequence Match ( AT5G62680.1 )
(BLAST)
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Arabidopsis Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.