Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- mitochondrion 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0190600-01 | Rice | cytosol, plastid | 5.31 | 1.1 |
| Os01t0960900-00 | Rice | cytosol | 0.88 | 0.36 |
| Os01t0761400-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os01t0761500-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os01t0913300-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os03t0687000-02 | Rice | plasma membrane | 0.0 | 0.0 |
| Os04t0660900-01 | Rice | plasma membrane, plastid | 0.0 | 0.0 |
| Os05t0338900-00 | Rice | plasma membrane | 0.0 | 0.0 |
| Os05t0410500-01 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
| Os05t0410800-01 | Rice | cytosol, extracellular, mitochondrion | 0.0 | 0.0 |
| Os05t0410900-02 | Rice | plasma membrane | 0.0 | 0.0 |
| Os05t0411100-00 | Rice | cytosol, nucleus, plasma membrane | 0.0 | 0.0 |
| Os06t0264500-01 | Rice | extracellular | 0.0 | 0.0 |
| Os07t0190650-00 | Rice | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| Os12t0638200-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 0.0 | 0.0 |
| Os12t0638300-01 | Rice | extracellular, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:23.2.3.1 | EntrezGene:9268634 | EMBL:AK073977 | ProteinID:BAD87130.1 | ProteinID:BAD87219.1 |
| ProteinID:BAH91485.1 | ProteinID:BAS76334.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005744 | GO:GO:0006139 |
| GO:GO:0006810 | GO:GO:0008033 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0030150 | GO:GO:0050660 | InterPro:IPR036869 | InterPro:J_dom_sf | EnsemblPlantsGene:Os01g0960800 |
| EnsemblPlants:Os01t0960800-01 | PFAM:PF03656 | PANTHER:PTHR12388 | PANTHER:PTHR12388:SF2 | UniProt:Q5JN36 | SignalP:SignalP-noTM |
| InterPro:Tim16 | UniParc:UPI00003B947B | RefSeq:XP_015627964.1 | : | : | : |
Description
Protein Transporter, Pam16 family protein. (Os01t0960800-01)
Coordinates
chr1:-:42361401..42363627
Molecular Weight (calculated)
12483.0 Da
IEP (calculated)
10.038
GRAVY (calculated)
-0.340
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARLLANLL VIGGTVLGRA AVQAYRQAIV NANKTGAAQE AINGIRRASK AMTEQEARQI LGISEKSTWE EIVQKYDTMF ERNAKNGSFY LQSKVHRAKE
101: CLEAVYQKPD VPS
101: CLEAVYQKPD VPS
001: MAGRLLANLI VMGSGIIGRA VFQAYRQALA NASKSGVAQE AMQNGVRQAG KAITEQEARQ ILGVTEKTSW EEILQKYDKL FENNAKAGSF YLQSKVHRAK
101: ECLEVVYRSQ GNGTPS
101: ECLEVVYRSQ GNGTPS
Arabidopsis Description
PAM16L2Mitochondrial import inner membrane translocase subunit PAM16 like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VV9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.