Factsheet for Os01t0960900-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0338900-00	Rice	plasma membrane	37.18	50.24
Os05t0410800-01	Rice	cytosol, extracellular, mitochondrion	22.38	27.93
Os12t0638300-01	Rice	extracellular, plasma membrane	38.27	18.06
Os06t0264500-01	Rice	extracellular	37.91	17.59
Os05t0410500-01	Rice	cytosol, plasma membrane	36.1	17.27
Os03t0687000-02	Rice	plasma membrane	36.46	17.21
Os01t0761400-01	Rice	plasma membrane	35.02	16.9
Os05t0411100-00	Rice	cytosol, nucleus, plasma membrane	37.18	16.67
Os07t0190650-00	Rice	cytosol, peroxisome, plasma membrane	37.18	16.67
Os12t0638200-01	Rice	cytosol, endoplasmic reticulum, peroxisome	35.38	16.67
Os01t0761500-01	Rice	plasma membrane	35.38	16.61
Os04t0660900-01	Rice	plasma membrane, plastid	36.82	16.16
Os01t0913300-01	Rice	plasma membrane	33.94	15.67
Os05t0410900-02	Rice	plasma membrane	32.85	15.22
Os01t0960800-01	Rice	mitochondrion	0.36	0.88
Os07t0190600-01	Rice	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Os01t0960900-00	EnsemblPlantsGene:Os01g0960900	Gene3D:1.20.1250.20	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF19	PFAM:PF00854	ProteinID:BAS76335.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0003939F49	UniProt:A0A0P0VD41	MapMan:24.2.2.9	:	:

Description

Oligopeptide transporter domain containing protein. (Os01t0960900-00)

Coordinates

chr1:-:42364072..42364905

Molecular Weight (calculated)

28918.2 Da

IEP (calculated)

8.307

GRAVY (calculated)

0.505

Length

277 amino acids

Sequence
(BLAST)

001: MVVAGETREE DGSVAKPWRL CTVQQVEDVK SVVRVLPLWS SGILVSVTVN AQVSLTVLQA LTMDRAVGPR FAVPAASITV TVLAAFVLAA ALFDRVAAPL
101: CAAAGKLAIT PLRRVGLGHA LNVASMAVAA LVERRRIGAA RGRAAAAAAV VPMSVLWLVP QLALTGAEEA LHLPGNTALF YGELPASLRG TATAMPPLFI
201: AAGSYLSAAA VDAVKRGTTW LPDDLNASRL DCVYWTLAVL AAVNLGYFLL CATTYKYNNY GGDDGNVKAQ TQTDDVS

Best Arabidopsis Sequence Match ( AT3G45650.1 )
(BLAST)

001: MASSVTGDAE TAISADSSTK RRGGGWITFP FMIATLLGLT IAAWGWLLNL IVYLIEEFNV KSIAAAQIAN IVSGCICMVP AVAAIASDSF FGTIPVISVS
101: AFISLMGVAL LTLTASLDTL RPRPCETASI LCQSPSKTQL GVLYTAITLA SIGTGGTRFT LATAGANQYE KTKDQGSFFN WFFFTTYLAG AISATAIVYT
201: EDNISWTLGF GLSVAANFFS FLVFVSGKRF YKHDKPLGSP FTSLLCVIFA ALRKRKAVVS TNEKDYHNES ITMPTKSFRF FNRAALKQED EVKPDGTIRN
301: PWRLCSVQQV EDFKAVIRII PLALATIFLS TPIAMQLSLT VLQGLVMDRR LGPSFKIPAG SLQVITLLST CLFIIVNDRV LYPFYQKLTG KHLTPLQRVG
401: IGHAFNILSM AVTAIVEAKR LKIVQKGHFL GSSSVADMSV LWLFPPLVIV GIGEAFHFPG NVALCYQEFP ESMRSTATSI TSVVIGICFY TSTALIDLIQ
501: RTTAWLPDDI NHGRVDNVYW ILVIGGVLNL GYFLVCSWLY RYRNLKDDDH KQAANVSH

Arabidopsis Description

NAXT1Nitrate excretion transporter1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSG9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.