Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G092870.1 | Barley | plasma membrane | 80.67 | 79.87 |
| TraesCS3D01G414400.1 | Wheat | plasma membrane | 79.83 | 79.44 |
| TraesCS3B01G454100.1 | Wheat | plasma membrane | 80.0 | 79.34 |
| TraesCS3A01G418800.1 | Wheat | plasma membrane | 80.17 | 77.33 |
| TraesCS3B01G454000.1 | Wheat | plasma membrane | 73.83 | 72.74 |
| TraesCS3D01G414300.1 | Wheat | plasma membrane | 73.5 | 72.65 |
| TraesCS3A01G418700.1 | Wheat | plasma membrane | 72.83 | 71.99 |
| GSMUA_Achr7P01710_001 | Banana | cytosol, peroxisome, plasma membrane | 51.83 | 54.66 |
| GSMUA_Achr2P12500_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 43.83 | 54.12 |
| GSMUA_Achr4P17590_001 | Banana | plasma membrane | 38.0 | 51.01 |
| VIT_01s0026g01490.t01 | Wine grape | plastid | 49.83 | 48.3 |
| Bra007886.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 47.0 | 47.72 |
| CDY40280 | Canola | plasma membrane | 45.17 | 47.71 |
| CDY56086 | Canola | cytosol, peroxisome, plasma membrane | 46.83 | 47.55 |
| CDY53067 | Canola | cytosol, peroxisome, plasma membrane | 46.83 | 47.31 |
| CDY25813 | Canola | cytosol, peroxisome, plasma membrane | 44.5 | 47.01 |
| CDY28441 | Canola | cytosol, peroxisome, plasma membrane | 44.5 | 47.01 |
| Bra012429.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 44.5 | 47.01 |
| Solyc05g006920.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 47.5 | 46.95 |
| KRH74756 | Soybean | plastid | 48.17 | 46.61 |
| AT1G27080.1 | Thale cress | cytosol, golgi, plasma membrane | 44.67 | 46.53 |
| KRH69380 | Soybean | plastid | 48.67 | 46.42 |
| PGSC0003DMT400045466 | Potato | cytosol, peroxisome, plasma membrane | 46.67 | 46.2 |
| CDY11647 | Canola | plastid | 47.5 | 46.04 |
| CDY38767 | Canola | plastid | 47.33 | 45.66 |
| Bra016259.1-P | Field mustard | plastid | 47.33 | 45.66 |
| CDY48389 | Canola | cytosol, peroxisome, plasma membrane | 45.83 | 45.3 |
| CDY23545 | Canola | cytosol, peroxisome, plasma membrane | 45.83 | 45.3 |
| KRG99183 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 46.83 | 45.18 |
| AT1G69870.1 | Thale cress | cytosol, nucleus, plasma membrane | 46.5 | 45.0 |
| Os03t0687000-02 | Rice | plasma membrane | 43.83 | 44.8 |
| CDY38766 | Canola | plasma membrane | 39.83 | 43.38 |
| Bra016260.1-P | Field mustard | plasma membrane | 39.67 | 43.19 |
| AT1G69860.1 | Thale cress | plasma membrane | 39.83 | 43.06 |
| Bra003979.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 24.67 | 43.02 |
| CDY11648 | Canola | plasma membrane | 39.17 | 42.65 |
| Os04t0660900-01 | Rice | plasma membrane, plastid | 44.17 | 42.0 |
| KRG99182 | Soybean | plasma membrane | 40.17 | 41.99 |
| Os12t0638300-01 | Rice | extracellular, plasma membrane | 40.5 | 41.4 |
| Os12t0638200-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 39.83 | 40.65 |
| Os07t0190650-00 | Rice | cytosol, peroxisome, plasma membrane | 41.17 | 39.97 |
| Os05t0410500-01 | Rice | cytosol, plasma membrane | 35.17 | 36.44 |
| Os06t0264500-01 | Rice | extracellular | 35.0 | 35.18 |
| Os05t0411100-00 | Rice | cytosol, nucleus, plasma membrane | 35.83 | 34.79 |
| Os01t0761500-01 | Rice | plasma membrane | 33.5 | 34.07 |
| Os05t0410900-02 | Rice | plasma membrane | 33.83 | 33.95 |
| Os01t0960900-00 | Rice | cytosol | 15.67 | 33.94 |
| Os05t0410800-01 | Rice | cytosol, extracellular, mitochondrion | 12.5 | 33.78 |
| Os05t0338900-00 | Rice | plasma membrane | 10.83 | 31.71 |
| Os01t0761400-01 | Rice | plasma membrane | 30.0 | 31.36 |
| Os07t0190600-01 | Rice | cytosol, plastid | 0.17 | 0.18 |
| Os01t0960800-01 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | EntrezGene:4324322 | EMBL:AK100698 | ProteinID:BAD82445.1 | ProteinID:BAF07084.1 |
| ProteinID:BAS75854.1 | ProteinID:EEE55874.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_trans_sf | EnsemblPlantsGene:Os01g0913300 | EnsemblPlants:Os01t0913300-01 | PFAM:PF00854 | InterPro:POT_fam |
| PANTHER:PTHR11654 | PANTHER:PTHR11654:SF20 | UniProt:Q5N7W6 | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI000049EA57 |
| RefSeq:XP_015616577.1 | SEG:seg | : | : | : | : |
Description
nitrate transporter 1.7TGF-beta receptor, type I/II extracellular region family protein. (Os01t0913300-01)
Coordinates
chr1:+:39810307..39815206
Molecular Weight (calculated)
65793.0 Da
IEP (calculated)
7.957
GRAVY (calculated)
0.401
Length
600 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIGAVENGG VVGGEVVAGK RGKTPQGWKC MPFIIATETF EKVATIGVVA NLTVYLVKRF NIGQIEAANI TNIFFGTLNF APLLGAFISD VYLGRFKTLA
101: YGCFASLLGM LGMTLYASLP ALKPPICHEK TRLGGGCNSP STLQLSVLYL SLGFLIIGGG AIRPCSLPFG VDQFDKTDEE GRKGLNSYYN WYYGTSTAAL
201: VLSMIVIIYI QNNVSWPIGF GIPTLLMFLA IIMLFLGTNL YVHVQPEGSI FAGIAQVLVA SFKKRNLKLP CPHDINQQGL MLYNPPSKGN RVFRLPLTSQ
301: FRFLNKGAIV MGDDINVDGS ARNSWELCNV QQIEEVKCLI RIVPVCISGV LCFVALAQQF TYIILQTFTM DCHFGTHFEI PAGSVVSISL IALTLFIPIY
401: DRILVPIARG FTGVESGITL LQRQGIGLAI SPISMVVAGL VERKRRNSAL SNGGISPMSV LWLAPQLVLM GIAEAFNAVG QIEFYNKQFP ENMQTLAGSL
501: FFCTIAGANY LSTALANIMR KVTTRDGHSS WLTDNINLGK LDYYFYFIAL MGVLNLIYFL ICSHFYQYKV MSLHSEESIK IPTKEEEATE IDIDTDAPSK
101: YGCFASLLGM LGMTLYASLP ALKPPICHEK TRLGGGCNSP STLQLSVLYL SLGFLIIGGG AIRPCSLPFG VDQFDKTDEE GRKGLNSYYN WYYGTSTAAL
201: VLSMIVIIYI QNNVSWPIGF GIPTLLMFLA IIMLFLGTNL YVHVQPEGSI FAGIAQVLVA SFKKRNLKLP CPHDINQQGL MLYNPPSKGN RVFRLPLTSQ
301: FRFLNKGAIV MGDDINVDGS ARNSWELCNV QQIEEVKCLI RIVPVCISGV LCFVALAQQF TYIILQTFTM DCHFGTHFEI PAGSVVSISL IALTLFIPIY
401: DRILVPIARG FTGVESGITL LQRQGIGLAI SPISMVVAGL VERKRRNSAL SNGGISPMSV LWLAPQLVLM GIAEAFNAVG QIEFYNKQFP ENMQTLAGSL
501: FFCTIAGANY LSTALANIMR KVTTRDGHSS WLTDNINLGK LDYYFYFIAL MGVLNLIYFL ICSHFYQYKV MSLHSEESIK IPTKEEEATE IDIDTDAPSK
001: MVLEDRKDGS SLPGRSGSFS KSSPSELDVV DPYKRISSPG SILDAEKVEK KPGGWRAVSF ILGNETLERL GSIGLLANFM VYLTKVFHLE QVDAANVINI
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK
Arabidopsis Description
NPF2.13Protein NRT1/ PTR FAMILY 2.13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX77]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.