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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48389 Canola cytosol, peroxisome, plasma membrane 96.54 96.54
Bra003979.1-P Field mustard cytosol, peroxisome, plasma membrane 53.54 94.48
CDY56086 Canola cytosol, peroxisome, plasma membrane 85.5 87.82
CDY53067 Canola cytosol, peroxisome, plasma membrane 85.5 87.37
CDY38767 Canola plastid 87.81 85.69
CDY11647 Canola plastid 87.31 85.62
AT1G69870.1 Thale cress cytosol, nucleus, plasma membrane 84.35 82.58
CDY40280 Canola plasma membrane 65.24 69.72
CDY28441 Canola cytosol, peroxisome, plasma membrane 64.91 69.37
CDY25813 Canola cytosol, peroxisome, plasma membrane 64.91 69.37
KRH74756 Soybean plastid 59.64 58.39
VIT_01s0026g01490.t01 Wine grape plastid 58.32 57.19
KRH69380 Soybean plastid 57.99 55.96
KRG99183 Soybean cytosol, peroxisome, plasma membrane, plastid 56.84 55.47
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 53.21 53.3
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 52.55 52.55
GSMUA_Achr4P17590_001 Banana plasma membrane 37.4 50.78
GSMUA_Achr2P12500_001 Banana extracellular, mitochondrion, plasma membrane, plastid 38.55 48.15
CDY38766 Canola plasma membrane 42.5 46.82
CDY11648 Canola plasma membrane 42.17 46.46
CDY09846 Canola plasma membrane 32.45 45.92
Os01t0913300-01 Rice plasma membrane 45.3 45.83
GSMUA_Achr7P01710_001 Banana cytosol, peroxisome, plasma membrane 42.67 45.52
CDY45756 Canola plasma membrane 42.34 45.01
CDY26715 Canola plasma membrane 42.34 44.31
HORVU3Hr1G092870.1 Barley plasma membrane 44.15 44.22
CDX81902 Canola cytosol, peroxisome, plasma membrane 42.83 43.92
TraesCS3D01G414400.1 Wheat plasma membrane 43.49 43.78
CDY30731 Canola plasma membrane 43.16 43.74
TraesCS3B01G454100.1 Wheat plasma membrane 43.49 43.64
CDY21692 Canola plasma membrane 41.19 43.55
TraesCS3A01G418700.1 Wheat plasma membrane 43.33 43.33
CDX83801 Canola cytosol, peroxisome, plasma membrane 42.17 43.32
CDY00315 Canola plasma membrane 43.66 43.3
TraesCS3B01G454000.1 Wheat plasma membrane 43.33 43.19
TraesCS3D01G414300.1 Wheat plasma membrane 43.16 43.16
CDY51783 Canola cytosol, peroxisome, plasma membrane 42.83 43.12
CDX84344 Canola plasma membrane 42.67 43.02
CDY45754 Canola plasma membrane 42.34 42.69
CDY36913 Canola cytosol, peroxisome, plasma membrane 43.16 42.6
TraesCS3A01G418800.1 Wheat plasma membrane 43.49 42.44
CDX68450 Canola cytosol, peroxisome, plasma membrane 42.83 42.28
CDX96690 Canola plasma membrane 41.68 41.68
CDX83027 Canola cytosol, peroxisome, plasma membrane 41.19 41.53
CDX87266 Canola peroxisome 38.72 41.01
CDY16763 Canola peroxisome 38.72 40.94
CDY69433 Canola golgi, peroxisome, plastid 42.5 40.69
CDY21805 Canola cytosol, peroxisome, plasma membrane 41.52 40.58
CDY52480 Canola plasma membrane 30.48 40.13
CDX86198 Canola peroxisome 37.23 39.72
CDY05592 Canola plasma membrane 36.24 38.46
CDY52504 Canola plasma membrane 36.24 38.46
CDY38595 Canola cytosol, peroxisome, plasma membrane 37.23 38.18
CDY20187 Canola plasma membrane 18.45 38.1
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 36.9 37.77
KXG37624 Sorghum plasma membrane 37.56 37.69
CDY69522 Canola plasma membrane 18.12 37.67
CDY69519 Canola plasma membrane 18.12 37.67
CDY30141 Canola plasma membrane 36.57 37.44
CDX97728 Canola plasma membrane 36.41 37.27
CDY70561 Canola plasma membrane 33.11 36.95
CDY07377 Canola cytosol, peroxisome, plasma membrane 36.24 36.91
CDY28371 Canola plasma membrane 29.32 36.63
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 20.92 36.49
CDY04237 Canola cytosol, peroxisome, plasma membrane 35.75 36.47
CDY65728 Canola cytosol 11.86 36.18
Os04t0660900-01 Rice plasma membrane, plastid 37.56 36.13
CDY51257 Canola plastid 28.83 36.01
CDY54537 Canola cytosol, peroxisome, plasma membrane 36.41 35.76
EES13016 Sorghum cytosol, nucleus, plasma membrane 37.4 35.52
CDX99152 Canola plasma membrane 31.96 34.83
CDX81495 Canola plasma membrane 29.32 34.3
CDY12696 Canola plasma membrane 29.16 34.24
CDY69402 Canola plasma membrane 16.8 34.23
Zm00001d001976_P001 Maize plastid 37.07 33.58
CDX86030 Canola plasma membrane 14.99 33.46
CDY18499 Canola plasma membrane 30.64 33.39
CDY67993 Canola plasma membrane 29.32 32.01
CDY48147 Canola plasma membrane 28.83 31.76
CDX99151 Canola plasma membrane 28.83 31.53
CDX96007 Canola cytosol, peroxisome, plasma membrane 31.14 27.31
CDX86031 Canola plasma membrane 6.92 27.1
CDX69747 Canola plasma membrane 29.98 11.77
CDY68532 Canola cytosol 0.66 0.75
Protein Annotations
MapMan:24.2.2.9GO:A0A078GAW3UniProt:A0A078GAW3EnsemblPlants:CDY23545ProteinID:CDY23545ProteinID:CDY23545.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00022195001InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF20SUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI0001890CE1SEG:seg:::
Description
BnaC06g25140DBnaC06g25140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAW3]
Coordinates
chrLK032144:-:511101..515670
Molecular Weight (calculated)
67278.1 Da
IEP (calculated)
9.149
GRAVY (calculated)
0.224
Length
607 amino acids
Sequence
(BLAST)
001: MVLMDGRDGS SPPQPKMDAV DSYNQESPSD SFSDAEKVEK KRGGWRAVTF ILGNETLERL GTIGLLSNFM VYLTRVFHLE QVKAANVINI WFGFTNLTPL
101: VGAFISDAYV GRFKTIAFAS FATLLGLVTL TLTASLPQLH PATCISKDSV SCSGPNKLQF GTLFLGLVFL SIGTGGIRPC SIPFGADQFD QRTEEGVNGV
201: ASFFNWYYLT FTVVLLITQT VVVYIQDQVS WIIGFSIPTG LMACALVIFF AGMKLYIYVK PEGSIFSSIA QVIVAARKKR KMKLSAEDDG TVTYYDPPVK
301: DSVLHKLHRS NQFRFLDKAA VIKEGDLTSE GVPANKWRLC SIQEVEEVKC LIRIVPVWSA GIISLMAMSQ QGTFTVSQAL KMDRHMGPKF EAPAGSLSVI
401: SLLTIGIFLP IYDRVLVPFL RRITGHKSGI TRLQRIGTGI VFAILSMIVA GLVERVRRTR SIKSGDPTGM TPMSVFWLSP QLILMGLCEA LNIIGQIEFF
501: NSQFPDHMRS IANALFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLDKN LNAGKLDYFY YLIAILGVVN LVYFWYCARG YRYKVGLGDF KEEKSYSDVE
601: MTSKSNN
Best Arabidopsis Sequence Match ( AT1G27080.1 )
(BLAST)
001: MGVVENRKIL PEKKLGGWRA ITFILGNETL EKLGSIGVSA NFMLYLRNVF HMEPVEAFNV YYLWMGLTNF APLLGALISD AYIGRFKTIA YASLFSILGL
101: MTVTLTACLP QLHPPPCNNP HPDECDDPNK LQLGILFLGL GFLSIGSGGI RPCSIPFGVD QFDQRTEQGL KGVASFFNWY YLTLTMVLIF SHTVVVYLQT
201: VSWVIGFSIP TSLMACAVVL FFVGMRFYVY VKPEGSVFSG IARVIVAARK KRDLKISLVD DGTEEYYEPP VKPGVLSKLP LTDQFKFLDK AAVILDGDLT
301: SEGVPANKWR LCSIQEVEEV KCLIRVVPVW SAGIISIVAM TTQATFMVFQ ATKMDRHMGP HFEIPAASIT VISYITIGIW VPIYEHLLVP FLWRMRKFRV
401: TLLQRMGIGI VFAILSMFTA GFVEGVRRTR ATEMTQMSVF WLALPLILMG LCESFNFIGL IEFFNSQFPE HMRSIANSLF PLSFAAANYL SSLLVTTVHK
501: VSGTKDHPDW LNKDLDRGKL DYFYYLIAVL GVVNLVYFWY CAHRYQYKAG SQIEDFNEEK SLLDIEPNQR HDQSPS
Arabidopsis Description
NPF2.12Protein NRT1/ PTR FAMILY 2.12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFX9]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.