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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30731 Canola plasma membrane 95.97 91.49
Bra029248.1-P Field mustard plasma membrane 97.9 91.34
CDY45754 Canola plasma membrane 94.4 89.53
CDX84344 Canola plasma membrane 92.12 87.38
CDY00315 Canola plasma membrane 93.52 87.25
AT5G62680.1 Thale cress golgi, peroxisome, vacuole 91.59 84.9
CDX87266 Canola peroxisome 81.26 80.98
CDY16763 Canola peroxisome 81.26 80.84
CDY36913 Canola cytosol, peroxisome, plasma membrane 80.21 74.47
CDY51783 Canola cytosol, peroxisome, plasma membrane 78.46 74.3
CDY69433 Canola golgi, peroxisome, plastid 81.09 73.03
CDY21805 Canola cytosol, peroxisome, plasma membrane 79.16 72.79
CDX68450 Canola cytosol, peroxisome, plasma membrane 77.06 71.54
CDX83027 Canola cytosol, peroxisome, plasma membrane 75.13 71.26
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 73.03 70.32
CDY26715 Canola plasma membrane 63.22 62.24
CDY21692 Canola plasma membrane 62.52 62.2
CDX83801 Canola cytosol, peroxisome, plasma membrane 64.27 62.1
CDX81902 Canola cytosol, peroxisome, plasma membrane 63.92 61.66
CDY09846 Canola plasma membrane 46.06 61.31
CDX96690 Canola plasma membrane 63.05 59.31
KRH03408 Soybean cytosol, peroxisome, plasma membrane 59.72 57.6
Solyc03g113420.2.1 Tomato plasma membrane 58.84 57.24
PGSC0003DMT400065196 Potato plasma membrane 58.84 56.85
KRH56970 Soybean cytosol, peroxisome, plasma membrane 59.19 56.62
KRH56968 Soybean plasma membrane 56.57 54.19
KRH03412 Soybean plasma membrane 55.52 54.1
KRH56969 Soybean plasma membrane 57.79 54.01
KRH03409 Soybean plasma membrane 57.62 53.76
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 51.14 52.14
GSMUA_Achr4P22320_001 Banana plasma membrane 43.96 49.6
Zm00001d031213_P001 Maize plasma membrane 44.13 49.51
Os03t0687000-02 Rice plasma membrane 50.44 49.06
Os12t0638300-01 Rice extracellular, plasma membrane 50.09 48.72
Zm00001d013529_P002 Maize plasma membrane 50.26 48.56
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 49.74 48.22
TraesCS4D01G026800.1 Wheat golgi, unclear 50.26 48.15
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 50.09 48.07
EER91066 Sorghum cytosol, peroxisome, plasma membrane 49.91 48.06
TraesCS4A01G283900.1 Wheat golgi, unclear 50.09 47.91
GSMUA_Achr5P15030_001 Banana cytosol 39.58 47.68
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 50.09 47.59
TraesCS2A01G045500.1 Wheat plasma membrane 49.91 47.58
TraesCS2D01G044200.1 Wheat plasma membrane 49.91 47.58
TraesCS2B01G057700.1 Wheat plasma membrane 49.74 47.41
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 49.74 47.02
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 49.91 46.64
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 49.74 46.41
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 49.21 46.29
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 49.56 46.09
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 47.46 46.09
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 49.39 45.78
TraesCS2D01G044000.1 Wheat plasma membrane 47.64 45.18
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 47.64 44.96
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 48.51 44.82
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 48.16 44.79
EES16414 Sorghum cytosol, peroxisome, plasma membrane 46.06 44.05
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 45.71 43.94
CDY56086 Canola cytosol, peroxisome, plasma membrane 44.66 43.15
EER98133 Sorghum plasma membrane 48.86 42.86
CDY53067 Canola cytosol, peroxisome, plasma membrane 44.48 42.76
CDY23545 Canola cytosol, peroxisome, plasma membrane 45.01 42.34
CDY48389 Canola cytosol, peroxisome, plasma membrane 45.01 42.34
CDY40280 Canola plasma membrane 41.33 41.55
CDY11647 Canola plastid 45.01 41.52
CDY38767 Canola plastid 45.18 41.48
CDY25813 Canola cytosol, peroxisome, plasma membrane 40.81 41.02
CDY28441 Canola cytosol, peroxisome, plasma membrane 40.63 40.85
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 48.16 40.09
CDY52480 Canola plasma membrane 30.3 37.53
CDY38766 Canola plasma membrane 35.9 37.21
CDY11648 Canola plasma membrane 35.55 36.84
CDX86198 Canola peroxisome 35.38 35.5
CDY05592 Canola plasma membrane 34.68 34.62
CDY52504 Canola plasma membrane 34.68 34.62
CDY38595 Canola cytosol, peroxisome, plasma membrane 35.55 34.29
CDX99152 Canola plasma membrane 32.75 33.57
CDY04237 Canola cytosol, peroxisome, plasma membrane 34.68 33.28
CDY28371 Canola plasma membrane 28.02 32.92
CDX86031 Canola plasma membrane 8.93 32.9
CDY07377 Canola cytosol, peroxisome, plasma membrane 34.33 32.89
CDY51257 Canola plastid 27.85 32.72
CDY48147 Canola plasma membrane 31.35 32.49
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 19.79 32.47
CDY54537 Canola cytosol, peroxisome, plasma membrane 34.85 32.2
CDY12696 Canola plasma membrane 28.72 31.72
CDY20187 Canola plasma membrane 16.29 31.63
CDX81495 Canola plasma membrane 28.72 31.6
CDY69402 Canola plasma membrane 16.46 31.54
CDY30141 Canola plasma membrane 32.75 31.53
CDX86030 Canola plasma membrane 14.89 31.25
CDY70561 Canola plasma membrane 29.77 31.25
CDY18499 Canola plasma membrane 30.47 31.24
CDX97728 Canola plasma membrane 32.4 31.2
CDY69519 Canola plasma membrane 15.94 31.16
CDY69522 Canola plasma membrane 15.94 31.16
CDY65728 Canola cytosol 10.33 29.65
CDY67993 Canola plasma membrane 28.37 29.14
CDX99151 Canola plasma membrane 28.2 29.01
CDX96007 Canola cytosol, peroxisome, plasma membrane 30.47 25.14
CDX69747 Canola plasma membrane 29.42 10.87
CDY68532 Canola cytosol 0.35 0.37
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078I7A9UniProt:A0A078I7A9EnsemblPlants:CDY45756ProteinID:CDY45756
ProteinID:CDY45756.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00082679001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EDC0B8SEG:seg::
Description
BnaC02g42260DBnaC02g42260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7A9]
Coordinates
chrLK032635:+:168531..170410
Molecular Weight (calculated)
62987.4 Da
IEP (calculated)
9.395
GRAVY (calculated)
0.441
Length
571 amino acids
Sequence
(BLAST)
001: MIFSSCMLLL PGNETFEKLG IIGTLSNLLV YLTAVFNMKS ITAATIINAF SGTINFGTFV AAFLCDTYFG RYKTLTVAVI ACFLGSLVIL LTAAVPQLHP
101: APCGTALTCT GPSGGQIAFL LMGLAFLVVG AGGIRPCNLA FGADQFNPKS ESGKRGIDSF FNWYFFTFTF AQILSLTLVV YIQSNVSWTI GLTIPVVLMF
201: LACVIFFAGD KLYVKIKASG SPLASIAQVI TVAIKKRGLK AVKQPWVNLY NYYPLNYANS KLKYTDQFRF LDKAAILAPE DKLEADGKPT DPWKLCTMQQ
301: VEEVKCIVRV LPIWFASSIY YLTITQQMTY PVFQALQSDR RLGSGGFVIP AATYVVFLMT GMTVFIIIYD RVLVPTLRRI TGIDTGITLL QRIGTGIFFA
401: FLSLVVSGFV EERRRTFALT KPTLGMAPRK GEISSMSAMW LIPQLTLAGV AEAFGAIGQM EFYYKQFPEN MRSFAGSIFY VGGGVSSYLG SFLIATVHRT
501: TQNSAGGNWL AEDLNKGRLD LFYFMIAGIL AVNFAYFLVM SRWYRYKGSD DEVTAYETNG DVIKQQDKNK V
Best Arabidopsis Sequence Match ( AT5G62680.1 )
(BLAST)
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Arabidopsis Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.