Factsheet for TraesCS5B01G001100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G012500.1	Wheat	cytosol, peroxisome, plasma membrane	97.2	96.56
TraesCS5A01G004400.1	Wheat	cytosol, nucleus, plasma membrane	96.54	95.75
HORVU5Hr1G000800.3	Barley	cytosol, peroxisome, plasma membrane	91.1	91.56
TraesCS5B01G039100.1	Wheat	cytosol, nucleus, plasma membrane	80.72	79.29
TraesCS2B01G057700.1	Wheat	plasma membrane	76.28	77.3
TraesCS2B01G057600.1	Wheat	cytosol, peroxisome, plasma membrane	74.14	74.38
Zm00001d031213_P001	Maize	plasma membrane	58.15	69.35
Os12t0638300-01	Rice	extracellular, plasma membrane	66.23	68.48
KXG24141	Sorghum	cytosol, peroxisome, plasma membrane	65.73	67.17
EES16414	Sorghum	cytosol, peroxisome, plasma membrane	64.42	65.49
Os12t0638200-01	Rice	cytosol, endoplasmic reticulum, peroxisome	63.26	65.31
GSMUA_Achr5P15030_001	Banana	cytosol	44.15	56.54
GSMUA_Achr5P15010_001	Banana	cytosol, peroxisome, plasma membrane	51.89	56.25
TraesCS4B01G029600.1	Wheat	cytosol, peroxisome, plasma membrane	54.2	55.29
VIT_14s0066g02590.t01	Wine grape	plasma membrane	51.73	53.68
PGSC0003DMT400065197	Potato	mitochondrion	51.4	53.33
Solyc03g113430.2.1	Tomato	plasma membrane	51.4	53.33
Solyc03g113420.2.1	Tomato	plasma membrane	48.43	50.09
KRH56970	Soybean	cytosol, peroxisome, plasma membrane	48.93	49.75
KRH03408	Soybean	cytosol, peroxisome, plasma membrane	48.43	49.66
PGSC0003DMT400065196	Potato	plasma membrane	48.27	49.58
Bra035886.1-P	Field mustard	plasma membrane	40.53	49.5
Solyc06g071570.2.1	Tomato	plasma membrane	47.12	49.48
CDY45756	Canola	plasma membrane	46.29	49.21
KRH56968	Soybean	plasma membrane	48.11	48.99
CDY09846	Canola	plasma membrane	34.6	48.95
PGSC0003DMT400069660	Potato	plasma membrane	46.29	48.62
CDY30731	Canola	plasma membrane	47.78	48.41
Bra029248.1-P	Field mustard	plasma membrane	48.43	48.04
KRH03412	Soybean	plasma membrane	46.29	47.95
KRH56969	Soybean	plasma membrane	48.11	47.79
CDX84344	Canola	plasma membrane	47.28	47.67
CDY00315	Canola	plasma membrane	47.94	47.55
CDY45754	Canola	plasma membrane	47.12	47.51
CDX81902	Canola	cytosol, peroxisome, plasma membrane	46.29	47.47
CDY26715	Canola	plasma membrane	45.3	47.41
Bra025695.1-P	Field mustard	plasma membrane	45.3	47.41
AT5G62680.1	Thale cress	golgi, peroxisome, vacuole	48.11	47.4
CDY21692	Canola	plasma membrane	44.81	47.39
Bra010111.1-P	Field mustard	plasma membrane	47.78	47.39
Bra031054.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.13	47.3
KRH03409	Soybean	plasma membrane	47.61	47.22
AT1G18880.1	Thale cress	cytosol, peroxisome, plasma membrane	45.3	46.85
Bra035885.1-P	Field mustard	peroxisome	43.49	46.81
CDX83801	Canola	cytosol, peroxisome, plasma membrane	45.47	46.7
CDX87266	Canola	peroxisome	43.82	46.42
CDY16763	Canola	peroxisome	43.82	46.34
Bra019521.1-P	Field mustard	plasma membrane	45.14	44.84
CDY51783	Canola	cytosol, peroxisome, plasma membrane	44.48	44.78
Bra033782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	45.14	44.55
CDX68450	Canola	cytosol, peroxisome, plasma membrane	45.14	44.55
Bra018096.1-P	Field mustard	cytosol, peroxisome, plasma membrane	45.14	44.55
CDY36913	Canola	cytosol, peroxisome, plasma membrane	45.14	44.55
CDX83027	Canola	cytosol, peroxisome, plasma membrane	43.99	44.35
Solyc06g071090.1.1	Tomato	endoplasmic reticulum, plasma membrane	21.91	43.89
CDX96690	Canola	plasma membrane	43.66	43.66
AT3G47960.1	Thale cress	plasma membrane	45.47	43.4
CDY69433	Canola	golgi, peroxisome, plastid	45.14	43.22
CDY21805	Canola	cytosol, peroxisome, plasma membrane	43.99	43.0
CDY16764	Canola	cytosol, mitochondrion, plasma membrane, plastid	40.03	40.98
TraesCS3B01G454100.1	Wheat	plasma membrane	39.37	39.5
TraesCS7B01G113600.2	Wheat	cytosol, nucleus, peroxisome	38.22	37.85
TraesCS3B01G454000.1	Wheat	plasma membrane	37.23	37.11
TraesCS3B01G332000.1	Wheat	plasma membrane	35.09	36.35
TraesCS1B01G268300.1	Wheat	cytosol, nucleus, plasma membrane	34.27	35.02
TraesCS1B01G267900.1	Wheat	plasma membrane	34.43	34.43
TraesCS3B01G332100.1	Wheat	plasma membrane	32.95	34.01
TraesCS1B01G268200.1	Wheat	plasma membrane	34.76	33.23
TraesCS7B01G020500.1	Wheat	plasma membrane	30.81	32.92
TraesCS5B01G152000.1	Wheat	plasma membrane	30.48	32.51
TraesCS7B01G020300.1	Wheat	plasma membrane	29.98	30.59
TraesCS7B01G020200.1	Wheat	peroxisome, plasma membrane, vacuole	19.11	29.9
Bra016534.1-P	Field mustard	plastid	45.14	26.55
VIT_17s0000g05550.t01	Wine grape	plasma membrane	50.91	18.03

Protein Annotations

EnsemblPlants:TraesCS5B01G001100.1	EnsemblPlantsGene:TraesCS5B01G001100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	InterPro:POT_fam	ncoils:Coil	PANTHER:PTHR11654	PANTHER:PTHR11654:SF59	PFAM:PF00854
SEG:seg	SUPFAM:SSF103473	TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.9	:

Description

No Description!

Coordinates

chr5B:-:860893..865595

Molecular Weight (calculated)

66375.3 Da

IEP (calculated)

8.628

GRAVY (calculated)

0.159

Length

607 amino acids

Sequence
(BLAST)

001: MDAPRQQQEE ERKEKTKAVK AVSEEAGASS SDTGDDGEEE AGAVHNHRGW KAMPYVIGNE TFEKLGTIGT LSNMLVYLTT VYHMPSVNAA TLLNVFSGTS
101: NLATVFGAYV SDTYLGRYTT IAAATMSSFI GMLILTLTAA IHTLHPPACN ASKGQHCEGP TGSQLAAILV SFFFLVIGAG GIRPCNLAFG ADQFNPRTAD
201: GRRGIASFFN WYYFTFTVAM MLSATVIIYL QSNVNWALGL AVPAALMGLS CAVFFMGTRL YVRVRPEGSP FTSFAQVLVA AARKRHIRRA RGDAELFDPP
301: HQSKLVSKLA YTDQFVCLDK AAVRTPDDAL CVDGKTPADP WRLCTLQQVE EVKCLARIIP VWSSGIVYFI VLTQLGTYVV LQAAQMDRRI SKSSSFQIPQ
401: GSFVVFQMLA LTTWIPVYDR FVVPALRRFT KREGGITLLQ RIGVGLALSV ATMVVSAAVE QRRRKIGSSM SCFWLVPQQL LAGLSEAFGA IGQIEFYYRQ
501: FPENMRSVAG ALYFLGFAMA SYASGLMVMV VHRATRGRGG QPDWLAQDLD EGRVDLFYLV TAAIATVNLV YFVICARWYR FKKSDDAGAG DVELDDDSPK
601: KPSAGLA

Best Arabidopsis Sequence Match ( AT5G62680.1 )
(BLAST)

001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA

Arabidopsis Description

NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.