Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G297600.1 | Wheat | plasma membrane | 97.28 | 97.28 |
| TraesCS3A01G304400.1 | Wheat | plasma membrane | 96.26 | 96.26 |
| HORVU3Hr1G073580.1 | Barley | plasma membrane | 86.73 | 81.34 |
| EES03650 | Sorghum | plasma membrane | 72.11 | 72.85 |
| Os01t0761500-01 | Rice | plasma membrane | 71.09 | 70.85 |
| Zm00001d043374_P001 | Maize | plasma membrane | 70.58 | 69.98 |
| GSMUA_Achr9P06310_001 | Banana | plasma membrane | 52.38 | 52.74 |
| Solyc12g007220.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 48.64 | 48.81 |
| KRH60261 | Soybean | plasma membrane | 46.43 | 47.64 |
| PGSC0003DMT400000812 | Potato | plasma membrane, plastid | 44.73 | 46.47 |
| KRH41549 | Soybean | plasma membrane | 43.71 | 44.39 |
| TraesCS3B01G332000.1 | Wheat | plasma membrane | 39.63 | 39.76 |
| TraesCS7B01G113600.2 | Wheat | cytosol, nucleus, peroxisome | 35.2 | 33.77 |
| TraesCS4B01G029600.1 | Wheat | cytosol, peroxisome, plasma membrane | 33.67 | 33.28 |
| TraesCS3B01G454100.1 | Wheat | plasma membrane | 34.18 | 33.22 |
| TraesCS1B01G267900.1 | Wheat | plasma membrane | 34.01 | 32.95 |
| TraesCS5B01G001100.1 | Wheat | cytosol, nucleus, plasma membrane | 34.01 | 32.95 |
| TraesCS2B01G057700.1 | Wheat | plasma membrane | 33.5 | 32.89 |
| TraesCS1B01G268300.1 | Wheat | cytosol, nucleus, plasma membrane | 32.82 | 32.49 |
| TraesCS2B01G057600.1 | Wheat | cytosol, peroxisome, plasma membrane | 32.48 | 31.57 |
| TraesCS3B01G454000.1 | Wheat | plasma membrane | 32.65 | 31.53 |
| TraesCS5B01G039100.1 | Wheat | cytosol, nucleus, plasma membrane | 32.99 | 31.39 |
| TraesCS1B01G268200.1 | Wheat | plasma membrane | 33.84 | 31.34 |
| TraesCS7B01G020500.1 | Wheat | plasma membrane | 30.27 | 31.34 |
| TraesCS5B01G152000.1 | Wheat | plasma membrane | 28.91 | 29.88 |
| TraesCS7B01G020300.1 | Wheat | plasma membrane | 29.25 | 28.91 |
| TraesCS7B01G020200.1 | Wheat | peroxisome, plasma membrane, vacuole | 15.82 | 23.97 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G332100.1 | EnsemblPlantsGene:TraesCS3B01G332100 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | InterPro:MFS_dom |
| InterPro:MFS_trans_sf | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF58 | PFAM:PF00854 | SEG:seg |
| SUPFAM:SSF103473 | TIGR:cd06174 | TMHMM:TMhelix | MapMan:24.2.2.9 | : | : |
Description
No Description!
Coordinates
chr3B:-:537467309..537469271
Molecular Weight (calculated)
64017.1 Da
IEP (calculated)
9.044
GRAVY (calculated)
0.400
Length
588 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSAMEEAA VRVPVPAARR KGGLRTIPFI ISNEIFEKVA TYGLQANMVV YLTKRYNMTP AASAMVLYLW SALTNFLPIG GGVLSDVFFG RFPVIAVGCV
101: VSLSGMCLLL VTAILPVYKK TLGCDPANPS ACTMLPCQLP LLFTSFMLMS LGAGGIRPCA LAFGADQLDK RDNSTKNVRR LQTFFNWYYT VLGLSLVVAV
201: LVIVYIQDHM GWVVGFSVPV VLMLAALMLF LAGSPLYLKA EADRSVLVGI VQVLVASYKN RRELLPPDTA EASCFHNKAG SRPRVPTKKM VSMNRACVLR
301: NPSKELNSDG SACDPWRLCT VQQVEDAKAV IRVLPIWSTG IIPGVIVAQV MFPVLQAGTM DRQMGKVEVP AASYSVFGII TLTVWVALYD RVLVRPLSRL
401: TGHARGLSLR QRMGAGLAVF AVAMAVAART EALRRGAAIA EGFQDQKHAV VHMSAMRLVP QHCLIGLADA LNLIGQIEFY YSEFPKTMSS IGVSLLALGV
501: GFGAVLGSAI VGIMNSATGR DGRDSWLSSN LNRGRYDYYY LVLAALSVAN LVYFIWCSWA YGEEGQIRIM ALAAEEAEEE ETKQEQHK
101: VSLSGMCLLL VTAILPVYKK TLGCDPANPS ACTMLPCQLP LLFTSFMLMS LGAGGIRPCA LAFGADQLDK RDNSTKNVRR LQTFFNWYYT VLGLSLVVAV
201: LVIVYIQDHM GWVVGFSVPV VLMLAALMLF LAGSPLYLKA EADRSVLVGI VQVLVASYKN RRELLPPDTA EASCFHNKAG SRPRVPTKKM VSMNRACVLR
301: NPSKELNSDG SACDPWRLCT VQQVEDAKAV IRVLPIWSTG IIPGVIVAQV MFPVLQAGTM DRQMGKVEVP AASYSVFGII TLTVWVALYD RVLVRPLSRL
401: TGHARGLSLR QRMGAGLAVF AVAMAVAART EALRRGAAIA EGFQDQKHAV VHMSAMRLVP QHCLIGLADA LNLIGQIEFY YSEFPKTMSS IGVSLLALGV
501: GFGAVLGSAI VGIMNSATGR DGRDSWLSSN LNRGRYDYYY LVLAALSVAN LVYFIWCSWA YGEEGQIRIM ALAAEEAEEE ETKQEQHK
001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
Arabidopsis Description
NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.