Factsheet for GSMUA_Achr9P06310_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000812	Potato	plasma membrane, plastid	53.25	54.95
Solyc12g007220.1.1	Tomato	cytosol, peroxisome, plasma membrane	54.97	54.78
Os01t0761500-01	Rice	plasma membrane	54.79	54.24
EES03650	Sorghum	plasma membrane	52.91	53.09
Zm00001d043374_P001	Maize	plasma membrane	53.25	52.45
TraesCS3B01G332100.1	Wheat	plasma membrane	52.74	52.38
TraesCS3A01G304400.1	Wheat	plasma membrane	52.74	52.38
TraesCS3D01G297600.1	Wheat	plasma membrane	52.57	52.21
KRH60261	Soybean	plasma membrane	50.86	51.83
HORVU3Hr1G073580.1	Barley	plasma membrane	52.4	48.8
KRH41549	Soybean	plasma membrane	48.29	48.7
GSMUA_Achr5P24480_001	Banana	plasma membrane	38.18	38.18
GSMUA_Achr4P22320_001	Banana	plasma membrane	32.19	37.15
GSMUA_Achr6P15780_001	Banana	plasma membrane	31.34	36.67
GSMUA_Achr10P...	Banana	plasma membrane	29.62	36.27
GSMUA_Achr4P17590_001	Banana	plasma membrane	27.74	36.24
GSMUA_Achr8P21720_001	Banana	nucleus	37.67	35.71
GSMUA_Achr2P12500_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	29.62	35.6
GSMUA_Achr5P15010_001	Banana	cytosol, peroxisome, plasma membrane	33.9	35.36
GSMUA_Achr5P15030_001	Banana	cytosol	28.42	35.02
GSMUA_Achr7P01710_001	Banana	cytosol, peroxisome, plasma membrane	33.73	34.62

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006857	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
EnsemblPlantsGene:GSMUA_Achr9G06310_001	EnsemblPlants:GSMUA_Achr9P06310_001	EnsemblPlants:GSMUA_Achr9T06310_001	InterPro:IPR020846	UniProt:M0TXZ0	InterPro:MFS_dom
InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF58
InterPro:PTR2_symporter_CS	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000295D069	SEG:seg	:

Description

Probable peptide transporter At1g52190 [Source:GMGC_GENE;Acc:GSMUA_Achr9G06310_001]

Coordinates

chr9:+:4043301..4045278

Molecular Weight (calculated)

63288.6 Da

IEP (calculated)

8.987

GRAVY (calculated)

0.377

Length

584 amino acids

Sequence
(BLAST)

001: MQAPVAEEEA PMPLKGKGGL KTLPCIMANE ILEKVASFGL HANMIVYLTK TYNMSPAAGA IVLFIWGAAS NFTPIFGAFL SDSFLGRFRV IAIGSFVSLI
101: GMALLWLTAV VPGAQPPACG HANDDCASPT SSQLAFLFAA FAVMSVGSGG VRPCSLAFGA DQLDQKGAPQ NERTLQTFFN WYYASVGISI IVAVTVIVYV
201: QDYKGWAVGF GVPVVLMAIS AALFLLGSPF YIKFKANKSI LAGLAQVIVV SLKNRHIVLP PDTNHVRFHN KKGSKLTVPT KKLRFLNKAC VIRNQEKDLN
301: PDGTASNAWN LCTVEQVEVL KSVVRVLPIW SSSIMVAVVI SQYSFPVLQA GTMDRHIGSK FQIPAGSFVV FSIITLTLWV AIYDRLVVPP LSKITGRPRG
401: FSLRQRMGIG QVLSCMATAA AAVTEGARRR RAIEQGLADD PQGMVNMSAM WLVPQNCLTG LAEALNLIGQ LEFYYSEFPR SMASVAVSLL TLGMGFGNLV
501: SSVITALVNK ISGADGGASW LDRNINKGHL DYYYWILTLL GIVNIFYFMA CSLVYGEEGQ DKIWDDDSQM KQDLHSAREL PIAV

Best Arabidopsis Sequence Match ( AT1G52190.1 )
(BLAST)

001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN

Arabidopsis Description

NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.