Factsheet for TraesCS3B01G454000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G414300.1	Wheat	plasma membrane	94.91	95.22
TraesCS3A01G418700.1	Wheat	plasma membrane	93.6	93.9
TraesCS3B01G454100.1	Wheat	plasma membrane	82.76	83.31
Os01t0913300-01	Rice	plasma membrane	72.74	73.83
GSMUA_Achr2P12500_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	41.22	51.65
GSMUA_Achr7P01710_001	Banana	cytosol, peroxisome, plasma membrane	47.78	51.14
GSMUA_Achr4P17590_001	Banana	plasma membrane	35.96	48.99
VIT_01s0026g01490.t01	Wine grape	plastid	48.6	47.82
CDY40280	Canola	plasma membrane	43.35	46.48
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.19	46.3
CDY25813	Canola	cytosol, peroxisome, plasma membrane	43.19	46.3
CDY28441	Canola	cytosol, peroxisome, plasma membrane	43.19	46.3
AT1G27080.1	Thale cress	cytosol, golgi, plasma membrane	43.68	46.18
KRH74756	Soybean	plastid	46.47	45.65
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.17	45.52
KRH69380	Soybean	plastid	46.96	45.47
CDY56086	Canola	cytosol, peroxisome, plasma membrane	44.01	45.35
CDY53067	Canola	cytosol, peroxisome, plasma membrane	44.01	45.12
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	44.5	44.65
PGSC0003DMT400045466	Potato	cytosol, peroxisome, plasma membrane	44.34	44.55
KRG99183	Soybean	cytosol, peroxisome, plasma membrane, plastid	45.32	44.37
CDY48389	Canola	cytosol, peroxisome, plasma membrane	43.68	43.82
CDY11647	Canola	plastid	44.5	43.78
CDY38767	Canola	plastid	44.66	43.73
Bra016259.1-P	Field mustard	plastid	44.66	43.73
CDY23545	Canola	cytosol, peroxisome, plasma membrane	43.19	43.33
AT1G69870.1	Thale cress	cytosol, nucleus, plasma membrane	43.68	42.9
KRG99182	Soybean	plasma membrane	39.74	42.16
CDY38766	Canola	plasma membrane	37.27	41.2
Bra016260.1-P	Field mustard	plasma membrane	37.11	41.02
AT1G69860.1	Thale cress	plasma membrane	37.27	40.9
CDY11648	Canola	plasma membrane	36.95	40.83
TraesCS4B01G029600.1	Wheat	cytosol, peroxisome, plasma membrane	39.57	40.5
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.0	38.95
TraesCS2B01G057700.1	Wheat	plasma membrane	37.77	38.4
TraesCS2B01G057600.1	Wheat	cytosol, peroxisome, plasma membrane	37.27	37.52
TraesCS5B01G001100.1	Wheat	cytosol, nucleus, plasma membrane	37.11	37.23
TraesCS5B01G039100.1	Wheat	cytosol, nucleus, plasma membrane	36.29	35.76
TraesCS1B01G267900.1	Wheat	plasma membrane	34.98	35.09
TraesCS7B01G113600.2	Wheat	cytosol, nucleus, peroxisome	33.5	33.28
TraesCS1B01G268300.1	Wheat	cytosol, nucleus, plasma membrane	32.35	33.16
TraesCS3B01G332100.1	Wheat	plasma membrane	31.53	32.65
TraesCS1B01G268200.1	Wheat	plasma membrane	33.17	31.81
TraesCS3B01G332000.1	Wheat	plasma membrane	30.05	31.23
TraesCS5B01G152000.1	Wheat	plasma membrane	28.24	30.23
TraesCS7B01G020500.1	Wheat	plasma membrane	28.08	30.11
TraesCS7B01G020300.1	Wheat	plasma membrane	27.26	27.9
TraesCS7B01G020200.1	Wheat	peroxisome, plasma membrane, vacuole	14.94	23.45

Protein Annotations

EnsemblPlants:TraesCS3B01G454000.1	EnsemblPlantsGene:TraesCS3B01G454000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF20	PFAM:PF00854	SEG:seg
SUPFAM:SSF103473	TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.9	:	:

Description

No Description!

Coordinates

chr3B:+:695504091..695513213

Molecular Weight (calculated)

66987.8 Da

IEP (calculated)

8.369

GRAVY (calculated)

0.306

Length

609 amino acids

Sequence
(BLAST)

001: MAAPGAAAEV QVEVEVRGGA LERGTGGGGG RRKPQGWKCM PFILAIATFE NVGSLGVVAN LTIYLVKRFN FGQLTATNTT SIFFGTLNFA PLLGAFISDA
101: YLGRFRTLAY GSFFSLLGML GLTLSASVPA FKLADCNQTI QLGEHCNSPS TLQLSVLYLS LAFLIIGGGA IRPCSLPFGV DQFDMTDKNS QKGLNSYYNW
201: YYGTTTIGLV FSMTILVYIQ ATISWPIGFG IPAFFMLLSI IILFMGTRLY VHVPPEGSIF TGIAQVLLAS FKKRRVKLPN SDNISQQELL LFNPPTRGHR
301: IFRLPLTSQF RFLNKGAVLR DGDINDDGSA RNSWELCSIQ QIEEVKCLIR IVPICISGIV CFVALVQQYT STSFQALTMD CHLGTHFEIP PGSVISISFI
401: ALTAFLPIYD QILVPIARRF TGVESGITLL QRQGIGLVIS PISMVVAGLV EHKRRNSALS NGGKSPMSVF WLAPQLILMG IADAFNAVGQ FEFYNKQFPE
501: QMLTLAGSLF YVTLAGAGYL STAMTNITKK VTTRDGHNSW IADDINLGKL DYYFYLIALM GVLNLFYFLI CSHYYQYKSI SHYAEEPIKI QTKEEVEAEM
601: DPSRDAPSK

Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)

001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV

Arabidopsis Description

NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.