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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38766 Canola plasma membrane 98.55 98.55
AT1G69860.1 Thale cress plasma membrane 84.21 83.6
KRG99182 Soybean plasma membrane 48.46 46.52
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 48.46 43.99
GSMUA_Achr4P17590_001 Banana plasma membrane 35.57 43.85
CDY56086 Canola cytosol, peroxisome, plasma membrane 46.82 43.65
CDY53067 Canola cytosol, peroxisome, plasma membrane 46.64 43.27
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 47.37 43.07
CDY11647 Canola plastid 47.73 42.49
CDY48389 Canola cytosol, peroxisome, plasma membrane 46.64 42.34
CDY23545 Canola cytosol, peroxisome, plasma membrane 46.46 42.17
CDY38767 Canola plastid 47.55 42.12
CDY25813 Canola cytosol, peroxisome, plasma membrane 43.38 42.08
CDY40280 Canola plasma membrane 42.83 41.55
CDY28441 Canola cytosol, peroxisome, plasma membrane 42.83 41.55
GSMUA_Achr2P12500_001 Banana extracellular, mitochondrion, plasma membrane, plastid 36.48 41.36
GSMUA_Achr7P01710_001 Banana cytosol, peroxisome, plasma membrane 41.02 39.72
TraesCS3D01G414400.1 Wheat plasma membrane 43.19 39.47
HORVU3Hr1G092870.1 Barley plasma membrane 43.38 39.44
TraesCS3B01G454100.1 Wheat plasma membrane 43.01 39.17
Os01t0913300-01 Rice plasma membrane 42.65 39.17
TraesCS3A01G418800.1 Wheat plasma membrane 43.74 38.75
TraesCS3B01G454000.1 Wheat plasma membrane 40.83 36.95
TraesCS3D01G414300.1 Wheat plasma membrane 40.47 36.74
TraesCS3A01G418700.1 Wheat plasma membrane 40.29 36.57
CDY26715 Canola plasma membrane 37.93 36.03
CDX83801 Canola cytosol, peroxisome, plasma membrane 38.48 35.87
CDY21692 Canola plasma membrane 37.21 35.71
CDY45756 Canola plasma membrane 36.84 35.55
CDX81902 Canola cytosol, peroxisome, plasma membrane 37.93 35.3
CDY09846 Canola plasma membrane 27.22 34.97
CDY30731 Canola plasma membrane 37.75 34.72
CDY65728 Canola cytosol 12.52 34.67
CDY51783 Canola cytosol, peroxisome, plasma membrane 37.57 34.33
CDY00315 Canola plasma membrane 38.11 34.31
CDY36913 Canola cytosol, peroxisome, plasma membrane 38.29 34.31
CDX96690 Canola plasma membrane 37.75 34.27
CDX84344 Canola plasma membrane 37.39 34.22
CDY45754 Canola plasma membrane 37.21 34.05
CDX68450 Canola cytosol, peroxisome, plasma membrane 37.93 33.98
CDX83027 Canola cytosol, peroxisome, plasma membrane 37.02 33.89
CDY20187 Canola plasma membrane 17.97 33.67
CDY16763 Canola peroxisome 34.85 33.45
CDY69519 Canola plasma membrane 17.6 33.22
CDY21805 Canola cytosol, peroxisome, plasma membrane 37.21 33.01
CDY69433 Canola golgi, peroxisome, plastid 37.93 32.97
CDY69522 Canola plasma membrane 17.42 32.88
CDX87266 Canola peroxisome 34.12 32.81
CDY05592 Canola plasma membrane 33.76 32.52
CDY52504 Canola plasma membrane 33.76 32.52
CDX86198 Canola peroxisome 33.03 31.99
CDY69402 Canola plasma membrane 17.24 31.88
EES13016 Sorghum cytosol, nucleus, plasma membrane 36.66 31.61
KXG37624 Sorghum plasma membrane 34.66 31.57
CDY38595 Canola cytosol, peroxisome, plasma membrane 33.58 31.25
CDY07377 Canola cytosol, peroxisome, plasma membrane 33.76 31.21
CDY67993 Canola plasma membrane 31.4 31.12
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 19.6 31.03
CDY52480 Canola plasma membrane 25.95 31.02
CDY70561 Canola plasma membrane 30.31 30.7
Os04t0660900-01 Rice plasma membrane, plastid 34.85 30.43
CDY04237 Canola cytosol, peroxisome, plasma membrane 32.85 30.42
CDX97728 Canola plasma membrane 32.49 30.19
CDY30141 Canola plasma membrane 32.49 30.19
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 32.49 30.19
CDX86030 Canola plasma membrane 14.88 30.15
CDX99152 Canola plasma membrane 29.95 29.62
CDY54537 Canola cytosol, peroxisome, plasma membrane 33.21 29.61
CDY51257 Canola plastid 25.77 29.22
CDY28371 Canola plasma membrane 25.77 29.22
Zm00001d001976_P001 Maize plastid 35.39 29.1
CDY18499 Canola plasma membrane 29.04 28.73
CDY48147 Canola plasma membrane 27.59 27.59
CDY12696 Canola plasma membrane 25.77 27.47
CDX99151 Canola plasma membrane 27.4 27.21
CDX81495 Canola plasma membrane 25.59 27.17
CDX86031 Canola plasma membrane 7.44 26.45
CDX96007 Canola cytosol, peroxisome, plasma membrane 28.68 22.83
CDX69747 Canola plasma membrane 31.58 11.25
CDY68532 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078FHU0UniProt:A0A078FHU0EnsemblPlants:CDY11648ProteinID:CDY11648
ProteinID:CDY11648.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00049785001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF20
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EF1976SEG:seg::
Description
BnaC06g30910DBnaC06g30910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHU0]
Coordinates
chrLK032012:-:763049..765405
Molecular Weight (calculated)
62095.7 Da
IEP (calculated)
7.759
GRAVY (calculated)
0.271
Length
551 amino acids
Sequence
(BLAST)
001: MDEEGTISSD STMRRRKPLG WKAMPYILAN ETLERLASFG LTSNFMVYMV REYHMDQVQA AALINTWSAL TNFAPIIGAF ISDSCTGKFV TIVFGSISEL
101: LGMLVLTLTS LIPTLRPPPC TTDQITGTCV RYSDQQLYVL LSGLFLLSVG TGGIRSCSIP FSLDQFDDST EEGREGSRSF FSWYYTTHTI VQLISMTLVL
201: YVQNNISWAL GFAIPTALNL FALVLLFVGV RFYVFIRPEG SVISGIFKVL VDAYEKRNAQ PPSEIEHYRP LLETSSQSNK LVLTDQFRFL NKAVIVMNND
301: EARNEEWKIC TMRQIEDIKS IISIIPIFAS SIIGFLAMNQ QHTFTVSQAL KMDLRFPGSS YLIPPASITV ISLLTIGIWL PFYETVLVRH IEYITKQEGG
401: ISLLQKVGIG NFFSILTMII SGILERERRD LSRAGVSRSV FWLAPQQVLM GFYEVFTIVG LTEFFNKQVP GYMRSIGNSL LYLGMSFASY LSSATVSTVH
501: SVTARGGRQS WLTDDIDTGK LDYFYYFIAA LSTLNLIFFL CCAKRYRYRN M
Best Arabidopsis Sequence Match ( AT1G69860.1 )
(BLAST)
001: MDNEKGTSSS DLTTRQRKPL GWKAMPYIIG NETLERLATF GLMANFMVYM VREYHMDQVQ AVTLINTWSA LTNFAPIIGA FISDSYTGKF NTIVFGSIAE
101: LLGMLVLTFT SLVPNLRPPP CTADQITGQC IPYSYSQLYV LLSGLFLLSV GTGGIRSCSV PFSLDQFDDS TEEGREGSRS FFSWYYTTHT IVQLVSMTLV
201: LYVQNNISWG IGFAIPTVLN FFALLLLFVG TRYYVFVKPE GSVFSGVFKV LVAAYKKRKA RFTSGIDYHQ PLLETDLQSN KLVLTDQFRF LNKAVIVMNN
301: DEAGNEEWRT CTVRQIEDIK SIISIIPIFA SSIIGFLAMN QQQTFTVSQA LKMDLQFPGT SYLIPPASIT VISLLNIGIW LPFYETVLVR HIENITKQNG
401: GISLLQKVGI GNIFSISTML ISGIVERKRR DLSLNGVKMS VFWLTPQQVL MGFYQVFTIV GLTEFFNKQV PINMRSIGNS LLYLGLSLAS YLSSAMVSIV
501: HSVTARGGQS WLTDDIDKSK LDCFYYFIAA LSTLNFIFFF WCARRYRYRN YSNEQ
Arabidopsis Description
NPF2.14Putative protein NRT1/ PTR FAMILY 2.14 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.