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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY16763 Canola peroxisome 97.73 97.56
CDY45754 Canola plasma membrane 87.96 83.72
CDX84344 Canola plasma membrane 87.78 83.55
CDY30731 Canola plasma membrane 86.21 82.47
CDY00315 Canola plasma membrane 87.78 82.19
CDY45756 Canola plasma membrane 80.98 81.26
AT5G62680.1 Thale cress golgi, peroxisome, vacuole 86.04 80.03
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 75.22 72.68
CDY36913 Canola cytosol, peroxisome, plasma membrane 76.96 71.71
CDY51783 Canola cytosol, peroxisome, plasma membrane 75.04 71.31
CDY21805 Canola cytosol, peroxisome, plasma membrane 75.92 70.05
CDX83027 Canola cytosol, peroxisome, plasma membrane 73.12 69.6
CDY69433 Canola golgi, peroxisome, plastid 76.44 69.09
CDX68450 Canola cytosol, peroxisome, plasma membrane 74.0 68.94
CDX83801 Canola cytosol, peroxisome, plasma membrane 61.95 60.07
CDY21692 Canola plasma membrane 60.03 59.93
CDY09846 Canola plasma membrane 44.85 59.91
CDY26715 Canola plasma membrane 60.38 59.66
CDX81902 Canola cytosol, peroxisome, plasma membrane 61.08 59.12
CDX96690 Canola plasma membrane 61.26 57.83
Solyc03g113420.2.1 Tomato plasma membrane 56.02 54.68
KRH03408 Soybean cytosol, peroxisome, plasma membrane 56.2 54.39
PGSC0003DMT400065196 Potato plasma membrane 55.85 54.15
KRH56970 Soybean cytosol, peroxisome, plasma membrane 55.5 53.27
KRH56969 Soybean plasma membrane 55.5 52.05
KRH03409 Soybean plasma membrane 55.32 51.8
KRH03412 Soybean plasma membrane 52.53 51.37
KRH56968 Soybean plasma membrane 53.23 51.17
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 49.91 51.07
Os12t0638300-01 Rice extracellular, plasma membrane 47.82 46.68
GSMUA_Achr4P22320_001 Banana plasma membrane 40.84 46.25
Zm00001d013529_P002 Maize plasma membrane 46.95 45.52
Os03t0687000-02 Rice plasma membrane 46.6 45.49
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 46.6 45.33
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 46.95 45.21
EER91066 Sorghum cytosol, peroxisome, plasma membrane 46.77 45.19
TraesCS4D01G026800.1 Wheat golgi, unclear 46.95 45.13
TraesCS2A01G045500.1 Wheat plasma membrane 47.12 45.08
TraesCS4A01G283900.1 Wheat golgi, unclear 46.77 44.89
TraesCS2D01G044200.1 Wheat plasma membrane 46.77 44.74
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 47.99 44.64
Zm00001d031213_P001 Maize plasma membrane 39.62 44.6
TraesCS2B01G057700.1 Wheat plasma membrane 46.6 44.57
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 47.64 44.46
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 46.42 44.26
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 47.12 44.12
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 46.42 44.04
GSMUA_Achr5P15030_001 Banana cytosol 36.3 43.88
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 46.77 43.86
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 46.42 43.82
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 44.85 43.71
TraesCS2D01G044000.1 Wheat plasma membrane 45.38 43.19
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 45.38 42.98
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 46.25 42.88
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 45.72 42.67
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 43.98 42.42
EES16414 Sorghum cytosol, peroxisome, plasma membrane 43.8 42.04
EER98133 Sorghum plasma membrane 46.77 41.17
CDY40280 Canola plasma membrane 39.09 39.44
CDY56086 Canola cytosol, peroxisome, plasma membrane 40.14 38.92
CDY25813 Canola cytosol, peroxisome, plasma membrane 38.39 38.73
CDY53067 Canola cytosol, peroxisome, plasma membrane 40.14 38.72
CDY23545 Canola cytosol, peroxisome, plasma membrane 41.01 38.72
CDY48389 Canola cytosol, peroxisome, plasma membrane 40.84 38.55
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 46.07 38.48
CDY28441 Canola cytosol, peroxisome, plasma membrane 38.05 38.38
CDY11647 Canola plastid 40.49 37.48
CDY38767 Canola plastid 40.66 37.46
CDY52480 Canola plasma membrane 28.1 34.92
CDY20187 Canola plasma membrane 17.63 34.35
CDY38766 Canola plasma membrane 32.98 34.3
CDX86198 Canola peroxisome 34.03 34.27
CDY05592 Canola plasma membrane 34.21 34.27
CDY52504 Canola plasma membrane 34.21 34.27
CDY11648 Canola plasma membrane 32.81 34.12
CDY38595 Canola cytosol, peroxisome, plasma membrane 34.21 33.11
CDY69402 Canola plasma membrane 17.1 32.89
CDY07377 Canola cytosol, peroxisome, plasma membrane 33.86 32.55
CDY04237 Canola cytosol, peroxisome, plasma membrane 33.68 32.44
CDX86031 Canola plasma membrane 8.73 32.26
CDY65728 Canola cytosol 10.99 31.66
CDX99152 Canola plasma membrane 30.72 31.6
CDY69519 Canola plasma membrane 16.06 31.51
CDY69522 Canola plasma membrane 16.06 31.51
CDX86030 Canola plasma membrane 14.83 31.25
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 18.67 30.75
CDY48147 Canola plasma membrane 29.49 30.67
CDY30141 Canola plasma membrane 31.59 30.52
CDY54537 Canola cytosol, peroxisome, plasma membrane 32.81 30.42
CDX97728 Canola plasma membrane 31.24 30.19
CDY18499 Canola plasma membrane 28.97 29.8
CDY12696 Canola plasma membrane 26.88 29.79
CDY70561 Canola plasma membrane 28.27 29.78
CDY28371 Canola plasma membrane 25.13 29.63
CDX81495 Canola plasma membrane 26.7 29.48
CDY51257 Canola plastid 24.78 29.22
CDY67993 Canola plasma membrane 27.4 28.24
CDX99151 Canola plasma membrane 27.05 27.93
CDX96007 Canola cytosol, peroxisome, plasma membrane 29.67 24.57
CDX69747 Canola plasma membrane 28.1 10.41
CDY68532 Canola cytosol 0.52 0.56
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078DDB6EnsemblPlants:CDX87266ProteinID:CDX87266ProteinID:CDX87266.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00146213001InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59SUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI0004EE4CF3SEG:seg:::
Description
BnaC09g05810D
Coordinates
chrLK031849:-:1545160..1547827
Molecular Weight (calculated)
63355.0 Da
IEP (calculated)
8.807
GRAVY (calculated)
0.263
Length
573 amino acids
Sequence
(BLAST)
001: MERKSLEVES MDHQKLSSAY DGSVTAVDSV KEDVQETKVV YRGWKVMPYI IGNETFEKLG IIGTLSNLLV YLTSVFNMKS VTAATIINAF AGTVNFGTFV
101: AAFLCDTYFG RYKTLTVAVL ACFLGSLAIL LTAAVPQLHP APCGTASSCS GPSGGQIAFL LMGLGILVVG AGGIRPCNLA FGADQFNPKS GSGKRGIDSF
201: FNWYFFTFTF AQILSLTVVV YVQSNVSWTI GLTIPVVLMF LASVIFFAGA KLYVKIEASG SPLASIAHVI TAAIKKHGLK SVEQPWLNLY NYYPSKYANA
301: KLKYTEQFRF LDKAANLTPE DKLDADGKPV NPWNLCTMQQ VEEVKCIMRV LPIWFASSIY YLTIAQQMTY PVFQALQSDR RLGSGGFMIP AATYVVFLMT
401: GMTLFIIFYD RVFERRRTLA LTKPTLGLAP RKGEISSMSA MWLIPQLVLA GIADAFGAIG QMEFYYKQFP ENMRSFAGSI FYVGAGVSSY ISSFLITTVH
501: RMTQNSAGGN WLAEDLNKGR LDYFYFLLAG ILAVNFAYFL VMARWYKYKG SDDEETSYET SGDIIKEQDK NKV
Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)
001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV
Arabidopsis Description
NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.