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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21692 Canola plasma membrane 95.1 98.08
CDY09846 Canola plasma membrane 69.93 96.5
CDX83801 Canola cytosol, peroxisome, plasma membrane 93.07 93.23
CDY26715 Canola plasma membrane 89.53 91.38
AT1G18880.1 Thale cress cytosol, peroxisome, plasma membrane 90.37 91.14
CDX96690 Canola plasma membrane 90.2 87.97
CDY45756 Canola plasma membrane 61.66 63.92
CDX84344 Canola plasma membrane 63.34 62.29
CDY45754 Canola plasma membrane 63.18 62.13
CDY00315 Canola plasma membrane 64.19 62.09
CDY30731 Canola plasma membrane 62.16 61.44
CDY16763 Canola peroxisome 59.46 61.32
CDX87266 Canola peroxisome 59.12 61.08
CDY36913 Canola cytosol, peroxisome, plasma membrane 61.82 59.51
CDY51783 Canola cytosol, peroxisome, plasma membrane 60.14 59.04
CDX68450 Canola cytosol, peroxisome, plasma membrane 61.32 59.02
CDY21805 Canola cytosol, peroxisome, plasma membrane 61.82 58.94
KRH03408 Soybean cytosol, peroxisome, plasma membrane 58.78 58.78
KRH56970 Soybean cytosol, peroxisome, plasma membrane 58.95 58.46
CDX83027 Canola cytosol, peroxisome, plasma membrane 59.29 58.31
CDY69433 Canola golgi, peroxisome, plastid 62.33 58.2
KRH56968 Soybean plasma membrane 56.76 56.38
KRH56969 Soybean plasma membrane 57.77 55.97
KRH03409 Soybean plasma membrane 57.6 55.72
KRH03412 Soybean plasma membrane 54.73 55.29
PGSC0003DMT400065196 Potato plasma membrane 54.39 54.48
Solyc03g113420.2.1 Tomato plasma membrane 53.89 54.34
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 52.36 52.28
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 47.3 50.0
GSMUA_Achr4P22320_001 Banana plasma membrane 42.23 49.41
Os03t0687000-02 Rice plasma membrane 48.31 48.72
Zm00001d013529_P002 Maize plasma membrane 48.48 48.56
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 48.14 48.39
TraesCS4D01G026800.1 Wheat golgi, unclear 48.65 48.32
EER91066 Sorghum cytosol, peroxisome, plasma membrane 48.31 48.23
TraesCS4A01G283900.1 Wheat golgi, unclear 48.48 48.07
Os12t0638300-01 Rice extracellular, plasma membrane 47.64 48.04
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 48.65 47.92
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 48.14 47.9
Zm00001d031213_P001 Maize plasma membrane 40.88 47.54
GSMUA_Achr5P15030_001 Banana cytosol 38.01 47.47
TraesCS2B01G057700.1 Wheat plasma membrane 47.97 47.41
TraesCS2A01G045500.1 Wheat plasma membrane 47.8 47.25
TraesCS2D01G044200.1 Wheat plasma membrane 47.64 47.08
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 47.47 46.52
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 47.47 46.29
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 47.64 46.15
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 47.13 45.59
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 45.1 45.41
EES16414 Sorghum cytosol, peroxisome, plasma membrane 45.78 45.39
TraesCS2D01G044000.1 Wheat plasma membrane 45.78 45.02
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 45.95 44.96
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 45.1 44.95
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 46.28 44.63
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 45.78 43.99
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 45.61 43.97
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 45.61 43.69
CDY23545 Canola cytosol, peroxisome, plasma membrane 43.92 42.83
CDY56086 Canola cytosol, peroxisome, plasma membrane 42.4 42.47
CDY40280 Canola plasma membrane 40.71 42.43
CDY28441 Canola cytosol, peroxisome, plasma membrane 40.37 42.08
CDY53067 Canola cytosol, peroxisome, plasma membrane 42.06 41.92
CDY25813 Canola cytosol, peroxisome, plasma membrane 40.2 41.9
CDY48389 Canola cytosol, peroxisome, plasma membrane 42.91 41.85
EER98133 Sorghum plasma membrane 45.27 41.17
CDY11647 Canola plastid 42.74 40.87
CDY38767 Canola plastid 42.74 40.68
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 46.11 39.8
CDY38766 Canola plasma membrane 35.47 38.11
CDY11648 Canola plasma membrane 35.3 37.93
CDY38595 Canola cytosol, peroxisome, plasma membrane 37.33 37.33
CDY52480 Canola plasma membrane 28.72 36.88
CDY04237 Canola cytosol, peroxisome, plasma membrane 36.99 36.81
CDY07377 Canola cytosol, peroxisome, plasma membrane 36.99 36.74
CDX86198 Canola peroxisome 34.46 35.85
CDY65728 Canola cytosol 11.99 35.68
CDY20187 Canola plasma membrane 17.57 35.37
CDY69402 Canola plasma membrane 17.74 35.23
CDY48147 Canola plasma membrane 32.77 35.21
CDY54537 Canola cytosol, peroxisome, plasma membrane 36.66 35.11
CDY05592 Canola plasma membrane 33.78 34.97
CDY52504 Canola plasma membrane 33.78 34.97
CDX99152 Canola plasma membrane 32.77 34.83
CDY12696 Canola plasma membrane 30.41 34.82
CDX81495 Canola plasma membrane 30.24 34.49
CDY18499 Canola plasma membrane 32.09 34.11
CDY30141 Canola plasma membrane 33.95 33.9
CDX97728 Canola plasma membrane 33.78 33.73
CDY69519 Canola plasma membrane 16.39 33.22
CDY69522 Canola plasma membrane 16.39 33.22
CDY70561 Canola plasma membrane 30.24 32.9
CDX86031 Canola plasma membrane 8.61 32.9
CDY28371 Canola plasma membrane 26.69 32.51
CDY51257 Canola plastid 26.35 32.1
CDX99151 Canola plasma membrane 30.07 32.07
CDX86030 Canola plasma membrane 14.7 31.99
CDY67993 Canola plasma membrane 28.55 30.4
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 17.74 30.17
CDX96007 Canola cytosol, peroxisome, plasma membrane 32.26 27.6
CDX69747 Canola plasma membrane 29.22 11.19
CDY68532 Canola cytosol 0.34 0.37
Protein Annotations
MapMan:24.2.2.9GO:A0A078CYJ3EnsemblPlants:CDX81902ProteinID:CDX81902ProteinID:CDX81902.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0022857
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00136861001InterPro:IPR020846InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EF2184
SEG:seg:::::
Description
BnaC08g36990D
Coordinates
chrLK031826:+:1405864..1408270
Molecular Weight (calculated)
65378.0 Da
IEP (calculated)
9.201
GRAVY (calculated)
0.271
Length
592 amino acids
Sequence
(BLAST)
001: MEVEKAEKNI TGEDDDDDSK LIYRGWKVMP FIIGNETFEK LGIVGSSSNL VIYLTTVFNM KSITAATVVN IYGGTSNFGT IVAAFLCDSY FGRYKTLSFA
101: MIACFLGSVA MDLTAVINQL HPAKCGKEIG SVCKGPSIGQ IMFLAGAMVL LVIGAGGIRP CNLPFGADQF NPKTKEGKRG VDSFFNWYFF TFTFAQMVSL
201: TLIVYVQSNV SWSIGLAIPA ILMLLGCIIF FAGSKLYVKV KASGSPIHSI TRVIVVAVKK RRLKLIGSSS EGLYNYIAKD FKNSKLSHTN QFRFLDKAAI
301: QTPDDKLNID GSPADIWKLC SVQQVEEVKC VIRVLPVWLS AALFYLAYIQ QTTYTIFQSL QSDRRLGSGS FQIPAGSYMV FLMLGMTIFI PIYDRVLVPF
401: LRKYTGRDGG ITQLQRVGAG LSLCITSMLV SAAVEQHRRT VALTRPTLGV APRKGAISSM SGMWLIPQLV LMGIGDALAG VGQMEFYYKQ FPENMRSFAG
501: SLYYCGIGLA SYLSSFLLSA VHNITEGSSA GNWLPEDLNK GRLEYFYYFV AGMMTLNFAY FLLVSHWYRY KDVVAKDNDM DKSSNEVDKV SV
Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)
001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV
Arabidopsis Description
NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.