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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033836.1-P Field mustard plasma membrane 89.11 94.06
CDX86031 Canola plasma membrane 23.77 84.52
CDX99152 Canola plasma membrane 77.13 76.3
AT3G45660.2 Thale cress plasma membrane 76.95 73.36
CDX86030 Canola plasma membrane 33.03 66.91
CDY18499 Canola plasma membrane 61.52 60.86
CDY12696 Canola plasma membrane 56.81 60.54
CDX81495 Canola plasma membrane 56.81 60.31
CDX99151 Canola plasma membrane 57.89 57.48
PGSC0003DMT400019427 Potato endoplasmic reticulum, plasma membrane 20.15 53.11
PGSC0003DMT400056834 Potato endoplasmic reticulum, plasma membrane 19.6 51.92
PGSC0003DMT400019424 Potato mitochondrion 31.4 51.49
VIT_06s0004g03530.t01 Wine grape plasma membrane 52.63 50.26
VIT_06s0004g03520.t01 Wine grape plasma membrane 52.45 50.09
PGSC0003DMT400016889 Potato plasma membrane 50.09 50.0
PGSC0003DMT400019426 Potato plasma membrane 49.73 49.55
Solyc06g075500.2.1 Tomato plasma membrane 48.64 49.36
Solyc06g075490.1.1 Tomato plasma membrane 48.82 49.0
PGSC0003DMT400019420 Potato plasma membrane 48.28 48.72
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 47.55 47.99
Solyc06g075480.2.1 Tomato plasma membrane 48.09 47.83
PGSC0003DMT400065303 Potato plasma membrane 45.55 47.72
KRH22952 Soybean plasma membrane 46.64 47.5
PGSC0003DMT400065310 Potato plasma membrane 47.19 46.85
Solyc11g072560.1.1 Tomato plasma membrane 43.56 46.69
Solyc11g072580.1.1 Tomato plasma membrane 46.1 46.27
Solyc11g072570.1.1 Tomato plasma membrane 46.64 45.98
Solyc06g075440.1.1 Tomato plasma membrane 41.38 42.94
Os05t0338900-00 Rice plasma membrane 15.97 42.93
PGSC0003DMT400019419 Potato plasma membrane 38.66 42.09
GSMUA_Achr6P15780_001 Banana plasma membrane 37.57 41.48
TraesCS4A01G440300.1 Wheat plasma membrane 40.29 40.29
TraesCS7D01G120200.1 Wheat cytosol, plasma membrane, vacuole 41.02 39.79
GSMUA_Achr10P... Banana plasma membrane 34.3 39.62
TraesCS7A01G121700.1 Wheat golgi, peroxisome, plasma membrane 40.83 39.54
TraesCS7D01G049400.1 Wheat plasma membrane 40.11 39.46
TraesCS7D01G119800.1 Wheat plasma membrane 39.75 39.39
TraesCS7D01G119900.1 Wheat plasma membrane 40.47 39.26
TraesCS7D01G049300.1 Wheat plasma membrane 39.2 39.2
HORVU7Hr1G025680.3 Barley plasma membrane 40.47 39.12
TraesCS7A01G054000.2 Wheat plasma membrane 39.02 39.02
HORVU7Hr1G025670.1 Barley plasma membrane 40.11 38.98
TraesCS7B01G020500.1 Wheat plasma membrane 40.11 38.91
TraesCS7A01G054100.1 Wheat plasma membrane 39.56 38.86
TraesCS4A01G440700.1 Wheat plasma membrane 39.38 38.82
TraesCS4A01G440400.1 Wheat plasma membrane 38.66 38.66
TraesCS4A01G440500.1 Wheat plasma membrane 38.66 38.66
TraesCS4A01G440600.1 Wheat plasma membrane 38.66 38.66
TraesCS5B01G152000.1 Wheat plasma membrane 39.75 38.49
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 40.29 38.34
TraesCS5D01G158500.1 Wheat plasma membrane 39.38 37.94
TraesCS7B01G020300.1 Wheat plasma membrane 40.47 37.48
TraesCS5A01G153200.1 Wheat plasma membrane 39.56 37.33
TraesCS7A01G121600.1 Wheat plastid 37.21 37.07
HORVU5Hr1G047970.5 Barley mitochondrion 39.02 35.77
CDY09846 Canola plasma membrane 25.59 32.87
CDX81902 Canola cytosol, peroxisome, plasma membrane 35.21 32.77
CDY26715 Canola plasma membrane 34.3 32.59
CDY21692 Canola plasma membrane 33.58 32.23
CDX83801 Canola cytosol, peroxisome, plasma membrane 34.48 32.15
CDY45756 Canola plasma membrane 32.49 31.35
CDY38595 Canola cytosol, peroxisome, plasma membrane 33.58 31.25
CDY30731 Canola plasma membrane 33.58 30.88
CDX96690 Canola plasma membrane 33.76 30.64
CDY00315 Canola plasma membrane 33.76 30.39
CDX84344 Canola plasma membrane 33.03 30.23
CDY45754 Canola plasma membrane 33.03 30.23
TraesCS7B01G020200.1 Wheat peroxisome, plasma membrane, vacuole 21.23 30.15
CDY36913 Canola cytosol, peroxisome, plasma membrane 33.39 29.92
CDY51783 Canola cytosol, peroxisome, plasma membrane 32.67 29.85
CDX68450 Canola cytosol, peroxisome, plasma membrane 33.21 29.76
CDY25813 Canola cytosol, peroxisome, plasma membrane 30.67 29.75
CDY40280 Canola plasma membrane 30.67 29.75
CDY28441 Canola cytosol, peroxisome, plasma membrane 30.49 29.58
CDX87266 Canola peroxisome 30.67 29.49
CDX83027 Canola cytosol, peroxisome, plasma membrane 32.12 29.4
CDY07377 Canola cytosol, peroxisome, plasma membrane 31.76 29.36
CDY48389 Canola cytosol, peroxisome, plasma membrane 32.3 29.32
CDY16763 Canola peroxisome 30.49 29.27
CDY04237 Canola cytosol, peroxisome, plasma membrane 31.58 29.24
CDY23545 Canola cytosol, peroxisome, plasma membrane 31.76 28.83
CDY56086 Canola cytosol, peroxisome, plasma membrane 30.85 28.76
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 18.15 28.74
CDY54537 Canola cytosol, peroxisome, plasma membrane 32.12 28.64
CDY53067 Canola cytosol, peroxisome, plasma membrane 30.67 28.45
CDY69433 Canola golgi, peroxisome, plastid 32.49 28.23
CDY28371 Canola plasma membrane 24.86 28.19
CDY38767 Canola plastid 31.76 28.14
CDY11647 Canola plastid 31.58 28.11
CDY21805 Canola cytosol, peroxisome, plasma membrane 31.58 28.02
CDX97728 Canola plasma membrane 29.95 27.82
CDY30141 Canola plasma membrane 29.95 27.82
CDY70561 Canola plasma membrane 27.4 27.76
CDY11648 Canola plasma membrane 27.59 27.59
CDY38766 Canola plasma membrane 27.4 27.4
CDY69519 Canola plasma membrane 14.52 27.4
CDY51257 Canola plastid 24.14 27.37
CDY67993 Canola plasma membrane 27.4 27.16
CDY69402 Canola plasma membrane 14.52 26.85
CDY69522 Canola plasma membrane 14.16 26.71
CDY52480 Canola plasma membrane 22.32 26.68
CDY20187 Canola plasma membrane 13.97 26.19
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 28.13 26.14
CDX86198 Canola peroxisome 26.5 25.66
CDY05592 Canola plasma membrane 26.13 25.17
CDY52504 Canola plasma membrane 26.13 25.17
CDY65728 Canola cytosol 9.07 25.13
CDX96007 Canola cytosol, peroxisome, plasma membrane 28.49 22.69
CDX69747 Canola plasma membrane 27.4 9.77
CDY68532 Canola cytosol 0.18 0.19
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078IDJ8UniProt:A0A078IDJ8EnsemblPlants:CDY48147ProteinID:CDY48147
ProteinID:CDY48147.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00088950001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF19SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EEFF28SEG:seg::::
Description
BnaCnng15890DProtein NRT1/ PTR FAMILY 2.6 [Source:Projected from Arabidopsis thaliana (AT3G45660) UniProtKB/Swiss-Prot;Acc:Q9M1E1]
Coordinates
chrLK032756:-:15625..17640
Molecular Weight (calculated)
61056.4 Da
IEP (calculated)
8.238
GRAVY (calculated)
0.346
Length
551 amino acids
Sequence
(BLAST)
001: MAVSVSNDAE APMSADSNTK HRNGGWITFP FMIATLLFLS LAVLGWLFNL IVFLIEEFNM KSIAAAQITN IVSSCTFMFP VVGAIAADSF FGTIPVISVS
101: AFISLMIKPK PCETTASSLC ESPSKIQFGV LYSAITLACV GAGGNRWEQV HPGHCWCESV KKKTKDQGSF FNWFFFTWYF AAAISTTAIV YTEENISWTF
201: GFGLCLAANL LGFLVFLSGK RFYKHEKPSG TPFTSLLRVI LAAVYKRKAE ISIDNKDYHS ESKEVPTKSF RFLNRAALKQ EDEVKPDGTI RNSWRLCSVQ
301: QVEDFKAVIR IIPLALATIC LSTPIATQLS LTVLQGLVID RSLGPKFKIP AGSLQVVTLL STCSFIIVND RLLYPFYQKL TGKFPTPLQR VGIGHVLNIL
401: SMALSAIVEA KRLKIVENGH FLESSSVADI SALWLFPSLV IVGIGEAFHF PGNVALCYQE FPESMKNTAT SITSVVIGIC FYTSTALIDM IQRTTDWLPD
501: DINHGRVDNV YWVLVIGGVL NLGYFLVCSW IYKYRNLEDD VHKKYSVVSP P
Best Arabidopsis Sequence Match ( AT3G45650.1 )
(BLAST)
001: MASSVTGDAE TAISADSSTK RRGGGWITFP FMIATLLGLT IAAWGWLLNL IVYLIEEFNV KSIAAAQIAN IVSGCICMVP AVAAIASDSF FGTIPVISVS
101: AFISLMGVAL LTLTASLDTL RPRPCETASI LCQSPSKTQL GVLYTAITLA SIGTGGTRFT LATAGANQYE KTKDQGSFFN WFFFTTYLAG AISATAIVYT
201: EDNISWTLGF GLSVAANFFS FLVFVSGKRF YKHDKPLGSP FTSLLCVIFA ALRKRKAVVS TNEKDYHNES ITMPTKSFRF FNRAALKQED EVKPDGTIRN
301: PWRLCSVQQV EDFKAVIRII PLALATIFLS TPIAMQLSLT VLQGLVMDRR LGPSFKIPAG SLQVITLLST CLFIIVNDRV LYPFYQKLTG KHLTPLQRVG
401: IGHAFNILSM AVTAIVEAKR LKIVQKGHFL GSSSVADMSV LWLFPPLVIV GIGEAFHFPG NVALCYQEFP ESMRSTATSI TSVVIGICFY TSTALIDLIQ
501: RTTAWLPDDI NHGRVDNVYW ILVIGGVLNL GYFLVCSWLY RYRNLKDDDH KQAANVSH
Arabidopsis Description
NAXT1Nitrate excretion transporter1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSG9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.