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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07377 Canola cytosol, peroxisome, plasma membrane 92.27 92.11
CDY69402 Canola plasma membrane 43.19 86.24
CDY38595 Canola cytosol, peroxisome, plasma membrane 84.87 85.3
AT1G68570.1 Thale cress cytosol, peroxisome, plasma membrane 84.37 84.23
CDY65728 Canola cytosol 27.9 83.42
CDY54537 Canola cytosol, peroxisome, plasma membrane 83.7 80.58
KRH75378 Soybean plasma membrane 69.08 71.35
Solyc05g009500.2.1 Tomato plasma membrane 64.71 67.19
KRH75379 Soybean plasma membrane 54.12 67.08
VIT_01s0011g03400.t01 Wine grape plasma membrane 65.55 66.9
PGSC0003DMT400037693 Potato plasma membrane 64.54 66.21
GSMUA_Achr5P24480_001 Banana plasma membrane 62.02 63.18
CDX96007 Canola cytosol, peroxisome, plasma membrane 69.24 59.54
EER88193 Sorghum cytosol, golgi, peroxisome 57.14 57.14
Zm00001d045667_P001 Maize cytosol, nucleus, peroxisome 56.97 57.07
Os06t0264500-01 Rice extracellular 56.64 56.45
HORVU7Hr1G042120.1 Barley cytosol 57.82 55.75
TraesCS7A01G206400.1 Wheat cytosol, nucleus, peroxisome 57.82 55.66
TraesCS7B01G113600.2 Wheat cytosol, nucleus, peroxisome 56.97 55.3
TraesCS7D01G209200.1 Wheat cytosol, nucleus, peroxisome 57.31 55.18
CDY20187 Canola plasma membrane 19.66 39.8
CDY69522 Canola plasma membrane 19.5 39.73
CDY69519 Canola plasma membrane 19.5 39.73
CDY26715 Canola plasma membrane 36.81 37.76
CDY56086 Canola cytosol, peroxisome, plasma membrane 37.31 37.56
CDX97728 Canola plasma membrane 37.14 37.27
CDY09846 Canola plasma membrane 26.72 37.06
CDY53067 Canola cytosol, peroxisome, plasma membrane 36.97 37.04
CDX81902 Canola cytosol, peroxisome, plasma membrane 36.81 36.99
CDY25813 Canola cytosol, peroxisome, plasma membrane 35.29 36.97
CDY40280 Canola plasma membrane 35.13 36.8
CDY21692 Canola plasma membrane 35.46 36.76
CDY30141 Canola plasma membrane 36.47 36.59
CDY70561 Canola plasma membrane 33.45 36.58
CDX83801 Canola cytosol, peroxisome, plasma membrane 36.3 36.55
CDY28441 Canola cytosol, peroxisome, plasma membrane 34.79 36.44
CDY48389 Canola cytosol, peroxisome, plasma membrane 36.81 36.08
CDY11647 Canola plastid 37.31 35.86
CDY23545 Canola cytosol, peroxisome, plasma membrane 36.47 35.75
CDY38767 Canola plastid 37.31 35.69
CDY28371 Canola plasma membrane 29.08 35.6
CDY51257 Canola plastid 28.57 34.98
CDY45756 Canola plasma membrane 33.28 34.68
CDY52480 Canola plasma membrane 26.72 34.49
CDX96690 Canola plasma membrane 35.13 34.43
CDY30731 Canola plasma membrane 34.12 33.89
CDX86030 Canola plasma membrane 15.46 33.82
CDY00315 Canola plasma membrane 34.79 33.82
CDY36913 Canola cytosol, peroxisome, plasma membrane 34.96 33.82
CDY16763 Canola peroxisome 32.6 33.8
CDY52504 Canola plasma membrane 32.44 33.74
CDY05592 Canola plasma membrane 32.44 33.74
CDY45754 Canola plasma membrane 34.12 33.72
CDX87266 Canola peroxisome 32.44 33.68
CDX84344 Canola plasma membrane 33.95 33.55
CDY51783 Canola cytosol, peroxisome, plasma membrane 33.95 33.5
CDX86198 Canola peroxisome 31.76 33.22
CDX99152 Canola plasma membrane 30.92 33.03
CDX68450 Canola cytosol, peroxisome, plasma membrane 34.12 33.01
CDY11648 Canola plasma membrane 30.42 32.85
CDX83027 Canola cytosol, peroxisome, plasma membrane 32.94 32.56
CDY12696 Canola plasma membrane 28.24 32.5
CDY38766 Canola plasma membrane 30.08 32.49
CDY18499 Canola plasma membrane 30.08 32.14
CDY69433 Canola golgi, peroxisome, plastid 34.12 32.02
CDX81495 Canola plasma membrane 27.9 31.98
CDY21805 Canola cytosol, peroxisome, plasma membrane 33.11 31.72
CDY48147 Canola plasma membrane 29.24 31.58
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 18.32 31.32
CDY67993 Canola plasma membrane 29.08 31.12
CDX86031 Canola plasma membrane 8.07 30.97
CDX99151 Canola plasma membrane 28.57 30.63
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 29.08 29.17
CDX69747 Canola plasma membrane 29.41 11.32
CDY68532 Canola cytosol 0.0 0.0
Protein Annotations
MapMan:11.6.4.1MapMan:24.2.2.9GO:A0A078ET64EnsemblPlants:CDY04237ProteinID:CDY04237ProteinID:CDY04237.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00117964001InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_fam
PANTHER:PTHR11654PANTHER:PTHR11654:SF178SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE36A3SEG:seg
Description
BnaC06g25780D
Coordinates
chrLK031950:+:486698..491854
Molecular Weight (calculated)
66203.3 Da
IEP (calculated)
9.468
GRAVY (calculated)
0.275
Length
595 amino acids
Sequence
(BLAST)
001: MEEQSKNKIS EEEKQHHGKP SRRKGGLITM PFIFANEMCE KMAVVGFHSN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLVGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SVLYIALLLG AIGSGGIRPC VVAFGADQFD ETGAGAPHKQ SDTTDERNLT VQRRTKLSMF
201: YFIMGAAVLV AVTVLVYIQD NVGWGVGLGI PTLAMFLSVI AFVGGFRLYR HLHPSGSPFT RLIQVAVAAF HKRKLSMVSD HTLLYFNDEI DAAISVDGIL
301: THTKHMSFLD KAAIKTEEDN LKSGQIPNLW RLSTVHRVEE LKSVIRMGPI GASGILLFTA YAQQGTFSLQ QAKTMNRHLT KSFQIPAGSM SVFTTVAMLC
401: TIVFYDRIFV KIARNFTGLE RGITFLHRMG IGFIISFIAT LVAGFVEIKR KQVALEHVLL DKPHTVIPIS FMWLIPQYSL HGIAEAFMSI GSLEFFYDQA
501: PESMRSTAMA LFWMLISIGN YASTLLVTLV HAFSAKSDGR NWLPDKNLNH GRLEYFYWLI TLLQAINFVY YLWCTKIYTY KPVQLQLSKK NLVDA
Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)
001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
Arabidopsis Description
NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.